RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 EXOC8Q8IYI6 725 aa21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 PIGOQ8TEQ8 1089 aa21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 NACC1Q96RE7 527 aa21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 DAXXQ9UER7 740 aaPredicted RBP21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 MICAL3Q7RTP6 2002 aa21.95■■□□□ 1.1
SHKBP1-214ENST00000597396 A0A087WWV3 80 aa21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 MAFO75444 373 aaPredicted RBP21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 BRD1O95696 1058 aa21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 VTNP04004 478 aa21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 ACTN1P12814 892 aa21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 XRCC6P12956 609 aaKnown RBP eCLIP21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 MARCKSP29966 332 aaPredicted RBP21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 CDC25AP30304 524 aa21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 RFC5P40937 340 aa21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 DNM2P50570 870 aa21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 MGAT3Q09327 533 aa21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 STK38Q15208 465 aa21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 ZNF579Q8NAF0 562 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 SLC7A3Q8WY07 619 aa21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 RNPC3Q96LT9 517 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 AK8Q96MA6 479 aa21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 CEP89Q96ST8 783 aa21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 MTIF3Q9H2K0 278 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-214ENST00000597396 CXCL10P02778 98 aa21.93■■□□□ 1.1
SHKBP1-214ENST00000597396 GPNMBQ14956 572 aa21.93■■□□□ 1.1
SHKBP1-214ENST00000597396 ZRSR1Q15695 479 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-214ENST00000597396 OTOP2Q7RTS6 562 aa21.93■■□□□ 1.1
SHKBP1-214ENST00000597396 LINC01465Q8N7H1 131 aa21.93■■□□□ 1.1
SHKBP1-214ENST00000597396 PPP1R16BQ96T49 567 aa21.93■■□□□ 1.1
SHKBP1-214ENST00000597396 CELF4Q9BZC1 486 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-214ENST00000597396 BMP2KQ9NSY1 1161 aaPredicted RBP21.93■■□□□ 1.1
SHKBP1-214ENST00000597396 TFIP11Q9UBB9 837 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-214ENST00000597396 KIAA1024Q9UPX6 916 aa21.93■■□□□ 1.1
SHKBP1-214ENST00000597396 GINS2Q9Y248 185 aa21.93■■□□□ 1.1
SHKBP1-214ENST00000597396 KDM3AQ9Y4C1 1321 aa21.93■■□□□ 1.1
SHKBP1-214ENST00000597396 IGKV6-21A0A0C4DH24 114 aa21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 GHRP10912 638 aa21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 LONP1P36776 959 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 NASPP49321 788 aaPredicted RBP21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 RARRES1P49788 294 aa21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 EMC2Q15006 297 aa21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 SLC39A14Q15043 492 aa21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 CNKSR3Q6P9H4 555 aa21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 SLC17A8Q8NDX2 589 aa21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 VWCEQ96DN2 955 aa21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 CDK5RAP3Q96JB5 506 aa21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 DHX33Q9H6R0 707 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 DDX19AQ9NUU7 478 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 DBR1Q9UK59 544 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-214ENST00000597396 MYH11P35749 1972 aa21.91■■□□□ 1.1
SHKBP1-214ENST00000597396 ZBBXA8MT70 800 aa21.91■■□□□ 1.1
SHKBP1-214ENST00000597396 GAS2O43903 313 aaKnown RBP21.91■■□□□ 1.1
SHKBP1-214ENST00000597396 UBA7P41226 1012 aa21.91■■□□□ 1.1
SHKBP1-214ENST00000597396 ECM1Q16610 540 aa21.91■■□□□ 1.1
SHKBP1-214ENST00000597396 FBXO47Q5MNV8 452 aa21.91■■□□□ 1.1
SHKBP1-214ENST00000597396 CABP7Q86V35 215 aa21.91■■□□□ 1.1
SHKBP1-214ENST00000597396 HERVK_113Q902F9 699 aa21.91■■□□□ 1.1
SHKBP1-214ENST00000597396 SEPT8Q92599 483 aa21.91■■□□□ 1.1
SHKBP1-214ENST00000597396 SCLT1Q96NL6 688 aa21.91■■□□□ 1.1
SHKBP1-214ENST00000597396 MTRQ99707 1265 aa21.91■■□□□ 1.1
SHKBP1-214ENST00000597396 MMTAG2Q9BU76 263 aaKnown RBP21.91■■□□□ 1.1
SHKBP1-214ENST00000597396 SRPRBQ9Y5M8 271 aaKnown RBP21.91■■□□□ 1.1
SHKBP1-214ENST00000597396 ARHGEF35A5YM69 484 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 USO1O60763 962 aaKnown RBP21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 DGAT1O75907 488 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 NLRP11P59045 1033 aaKnown RBP21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 GRIN1Q05586 938 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 DRP2Q13474 957 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 KIZQ2M2Z5 673 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 ATL3Q6DD88 541 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 ZNF710Q8N1W2 664 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 DBF4BQ8NFT6 615 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 RASSF8Q8NHQ8 419 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 TCP11Q8WWU5 503 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 CALML4Q96GE6 196 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 OSBPL7Q9BZF2 842 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 NT5C3AQ9H0P0 336 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 ATP6V0A4Q9HBG4 840 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 SUCLA2Q9P2R7 463 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 FBXO2Q9UK22 296 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 ZDHHC9Q9Y397 364 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 MORC2Q9Y6X9 1032 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 GBF1Q92538 1859 aa21.9■■□□□ 1.1
SHKBP1-214ENST00000597396 PTPRSQ13332 1948 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 SPTLC2O15270 562 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 YEATS4O95619 227 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 MKRN4PQ13434 485 aaPredicted RBP21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 LPIN1Q14693 890 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 PLEKHG4Q58EX7 1191 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 TSHZ1Q6ZSZ6 1077 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 KRI1Q8N9T8 703 aaKnown RBP21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 USP38Q8NB14 1042 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 LINC00301Q8NCQ3 95 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 TMEM143Q96AN5 459 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 ZNF668Q96K58 619 aaPredicted RBP21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 OSMRQ99650 979 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 IFIH1Q9BYX4 1025 aaKnown RBP21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 CSRNP2Q9H175 543 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 MTMR10Q9NXD2 777 aa21.89■■□□□ 1.09
SHKBP1-214ENST00000597396 CFAP45Q9UL16 551 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms