RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 TPH2Q8IWU9 490 aa8.37□□□□□ -1.07
LEMD3-206ENST00000545026 MAGEB6Q8N7X4 407 aa8.37□□□□□ -1.07
LEMD3-206ENST00000545026 TTC8Q8TAM2 541 aa8.37□□□□□ -1.07
LEMD3-206ENST00000545026 FAM168AQ92567 244 aa8.37□□□□□ -1.07
LEMD3-206ENST00000545026 SYT3Q9BQG1 590 aa8.37□□□□□ -1.07
LEMD3-206ENST00000545026 QRSL1Q9H0R6 528 aaKnown RBP8.37□□□□□ -1.07
LEMD3-206ENST00000545026 CNTD2Q9H8S5 307 aa8.37□□□□□ -1.07
LEMD3-206ENST00000545026 INVSQ9Y283 1065 aa8.37□□□□□ -1.07
LEMD3-206ENST00000545026 GPR45Q9Y5Y3 372 aa8.37□□□□□ -1.07
LEMD3-206ENST00000545026 NUMBLQ9Y6R0 609 aa8.37□□□□□ -1.07
LEMD3-206ENST00000545026 CARMIL2Q6F5E8 1435 aa8.37□□□□□ -1.07
LEMD3-206ENST00000545026 MYOCOSA0A1B0GUC4 107 aa8.36□□□□□ -1.07
LEMD3-206ENST00000545026 KIF3BO15066 747 aa8.36□□□□□ -1.07
LEMD3-206ENST00000545026 ZRANB2O95218 330 aaKnown RBP eCLIP8.36□□□□□ -1.07
LEMD3-206ENST00000545026 LPLP06858 475 aa8.36□□□□□ -1.07
LEMD3-206ENST00000545026 PFKMP08237 780 aa8.36□□□□□ -1.07
LEMD3-206ENST00000545026 CT47B1P0C2W7 299 aaPredicted RBP8.36□□□□□ -1.07
LEMD3-206ENST00000545026 ECE1P42892 770 aa8.36□□□□□ -1.07
LEMD3-206ENST00000545026 TBX4P57082 545 aa8.36□□□□□ -1.07
LEMD3-206ENST00000545026 MRPS9P82933 396 aaKnown RBP8.36□□□□□ -1.07
LEMD3-206ENST00000545026 MLC1Q15049 377 aa8.36□□□□□ -1.07
LEMD3-206ENST00000545026 SKIDA1Q1XH10 827 aa8.36□□□□□ -1.07
LEMD3-206ENST00000545026 EFCAB2Q5VUJ9 269 aa8.36□□□□□ -1.07
LEMD3-206ENST00000545026 CXorf57Q6NSI4 855 aaKnown RBP8.36□□□□□ -1.07
LEMD3-206ENST00000545026 MPZL3Q6UWV2 235 aa8.36□□□□□ -1.07
LEMD3-206ENST00000545026 CALML6Q8TD86 181 aa8.36□□□□□ -1.07
LEMD3-206ENST00000545026 RAX2Q96IS3 184 aa8.36□□□□□ -1.07
LEMD3-206ENST00000545026 PNMA8BQ9ULN7 279 aaPredicted RBP8.36□□□□□ -1.07
LEMD3-206ENST00000545026 PCDHA5Q9Y5H7 936 aa8.36□□□□□ -1.07
LEMD3-206ENST00000545026 PEX10O60683 326 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 ATF3P18847 181 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 CDR1P51861 262 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 TCIRG1Q13488 830 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 TRIM25Q14258 630 aaKnown RBP8.35□□□□□ -1.07
LEMD3-206ENST00000545026 NOLC1Q14978 699 aaKnown RBP eCLIP8.35□□□□□ -1.07
LEMD3-206ENST00000545026 TARBP2Q15633 366 aaKnown RBP8.35□□□□□ -1.07
LEMD3-206ENST00000545026 B3GNT8Q7Z7M8 397 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 SLC41A1Q8IVJ1 513 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 SSH1Q8WYL5 1049 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 HSPBAP1Q96EW2 488 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 CCDC136Q96JN2 1154 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 BTBD2Q9BX70 525 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 KCTD10Q9H3F6 313 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 DLL4Q9NR61 685 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 SIRT5Q9NXA8 310 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 GABBR1Q9UBS5 961 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 MBD1Q9UIS9 605 aaPredicted RBP8.35□□□□□ -1.07
LEMD3-206ENST00000545026 DENND2AQ9ULE3 1009 aa8.35□□□□□ -1.07
LEMD3-206ENST00000545026 MYPNQ86TC9 1320 aa8.34□□□□□ -1.07
LEMD3-206ENST00000545026 ST20-MTHFSA0A0A6YYL1 179 aa8.34□□□□□ -1.07
LEMD3-206ENST00000545026 PRC1O43663 620 aa8.34□□□□□ -1.07
LEMD3-206ENST00000545026 CYP2C8P10632 490 aa8.34□□□□□ -1.07
LEMD3-206ENST00000545026 OSMP13725 252 aa8.34□□□□□ -1.07
LEMD3-206ENST00000545026 NCKAP1LP55160 1127 aa8.34□□□□□ -1.07
LEMD3-206ENST00000545026 PRR23BQ6ZRT6 265 aa8.34□□□□□ -1.07
LEMD3-206ENST00000545026 SMARCC2Q8TAQ2 1214 aa8.34□□□□□ -1.07
LEMD3-206ENST00000545026 TMEM209Q96SK2 561 aa8.34□□□□□ -1.07
LEMD3-206ENST00000545026 NUP88Q99567 741 aaPredicted RBP8.34□□□□□ -1.07
LEMD3-206ENST00000545026 IL18BPO95998 194 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 MTHFD2P13995 350 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 JUNBP17275 347 aaPredicted RBP8.33□□□□□ -1.08
LEMD3-206ENST00000545026 C5AR1P21730 350 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 IGFBP6P24592 240 aaPredicted RBP8.33□□□□□ -1.08
LEMD3-206ENST00000545026 LGALS4P56470 323 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 BCAR1P56945 870 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 STILQ15468 1287 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 MUM1Q2TAK8 710 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 SLC2A13Q96QE2 648 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 DIRC2Q96SL1 478 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 PITHD1Q9GZP4 211 aaPredicted RBP8.33□□□□□ -1.08
LEMD3-206ENST00000545026 MCOLN1Q9GZU1 580 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 OR10A5Q9H207 317 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 MTG2Q9H4K7 406 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 NSUN3Q9H649 340 aaKnown RBP8.33□□□□□ -1.08
LEMD3-206ENST00000545026 KCNK12Q9HB15 430 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 SLC52A1Q9NWF4 448 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.33□□□□□ -1.08
LEMD3-206ENST00000545026 ARHGAP20Q9P2F6 1191 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 DPP7Q9UHL4 492 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 ZBTB21Q9ULJ3 1066 aa8.33□□□□□ -1.08
LEMD3-206ENST00000545026 PCDH8O95206 1070 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 IL33O95760 270 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 APEX1P27695 318 aaKnown RBP8.32□□□□□ -1.08
LEMD3-206ENST00000545026 CYP2C19P33261 490 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 ITGA1P56199 1179 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 IL13RA1P78552 427 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 ADAM9Q13443 819 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 PHF19Q5T6S3 580 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 KANK2Q63ZY3 851 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 IGDCC3Q8IVU1 814 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 MZB1Q8WU39 189 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 TSPEARQ8WU66 669 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 RSAD2Q8WXG1 361 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 AUTS2Q8WXX7 1259 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 RPGRQ92834 1020 aaKnown RBP8.32□□□□□ -1.08
LEMD3-206ENST00000545026 GORASP1Q9BQQ3 440 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 EPB41L4BQ9H329 900 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 DCP1AQ9NPI6 582 aaPredicted RBP8.32□□□□□ -1.08
LEMD3-206ENST00000545026 PRSS50Q9UI38 385 aa8.32□□□□□ -1.08
LEMD3-206ENST00000545026 TUBD1Q9UJT1 453 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms