RNA–Protein interactions for RNA: ENST00000529182.5

VPS28-210, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2 BASIC

Gene VPS28, Length 1,010 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-210ENST00000529182 OTUD6AQ7L8S5 288 aa14.94□□□□□ -0.02
VPS28-210ENST00000529182 POLR3CQ9BUI4 534 aaPredicted RBP14.94□□□□□ -0.02
VPS28-210ENST00000529182 AGO3Q9H9G7 860 aaKnown RBP14.94□□□□□ -0.02
VPS28-210ENST00000529182 TUFT1Q9NNX1 390 aa14.94□□□□□ -0.02
VPS28-210ENST00000529182 IGKV6-21A0A0C4DH24 114 aa14.93□□□□□ -0.02
VPS28-210ENST00000529182 GPR32O75388 356 aa14.93□□□□□ -0.02
VPS28-210ENST00000529182 RPLP2P05387 115 aaKnown RBP14.93□□□□□ -0.02
VPS28-210ENST00000529182 RPA1P27694 616 aa14.93□□□□□ -0.02
VPS28-210ENST00000529182 TMOD1P28289 359 aa14.93□□□□□ -0.02
VPS28-210ENST00000529182 CD52P31358 61 aa14.93□□□□□ -0.02
VPS28-210ENST00000529182 PDIA5Q14554 519 aa14.93□□□□□ -0.02
VPS28-210ENST00000529182 TMCO2Q7Z6W1 182 aaPredicted RBP14.93□□□□□ -0.02
VPS28-210ENST00000529182 ERMNQ8TAM6 284 aa14.93□□□□□ -0.02
VPS28-210ENST00000529182 SNX29Q8TEQ0 813 aa14.93□□□□□ -0.02
VPS28-210ENST00000529182 TMEM40Q8WWA1 233 aa14.93□□□□□ -0.02
VPS28-210ENST00000529182 SEPT8Q92599 483 aa14.93□□□□□ -0.02
VPS28-210ENST00000529182 MAP7D2Q96T17 732 aa14.93□□□□□ -0.02
VPS28-210ENST00000529182 OSMRQ99650 979 aa14.93□□□□□ -0.02
VPS28-210ENST00000529182 IFIH1Q9BYX4 1025 aaKnown RBP14.93□□□□□ -0.02
VPS28-210ENST00000529182 MTIF3Q9H2K0 278 aaKnown RBP14.93□□□□□ -0.02
VPS28-210ENST00000529182 ZSCAN16Q9H4T2 348 aaPredicted RBP14.93□□□□□ -0.02
VPS28-210ENST00000529182 SLC4A7Q9Y6M7 1214 aa14.93□□□□□ -0.02
VPS28-210ENST00000529182 KDM3AQ9Y4C1 1321 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.92□□□□□ -0.02
VPS28-210ENST00000529182 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.92□□□□□ -0.02
VPS28-210ENST00000529182 BAIAP3O94812 1187 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 RARRES1P49788 294 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 POLGP54098 1239 aaPredicted RBP14.92□□□□□ -0.02
VPS28-210ENST00000529182 NLRP11P59045 1033 aaKnown RBP14.92□□□□□ -0.02
VPS28-210ENST00000529182 WDR5P61964 334 aaKnown RBP14.92□□□□□ -0.02
VPS28-210ENST00000529182 DEFB103AP81534 67 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 GRIN1Q05586 938 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 IKBKEQ14164 716 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 EMC2Q15006 297 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 PTPAQ15257 358 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 FOXD4L6Q3SYB3 417 aaPredicted RBP14.92□□□□□ -0.02
VPS28-210ENST00000529182 HAUS3Q68CZ6 603 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 FOXD4L3Q6VB84 417 aaPredicted RBP14.92□□□□□ -0.02
VPS28-210ENST00000529182 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.92□□□□□ -0.02
VPS28-210ENST00000529182 TSHZ1Q6ZSZ6 1077 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 TMEM143Q96AN5 459 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 USP28Q96RU2 1077 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 MMTAG2Q9BU76 263 aaKnown RBP14.92□□□□□ -0.02
VPS28-210ENST00000529182 RAB34Q9BZG1 259 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 ADAMTS10Q9H324 1103 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 DHX33Q9H6R0 707 aaKnown RBP14.92□□□□□ -0.02
VPS28-210ENST00000529182 ANKEF1Q9NU02 776 aa14.92□□□□□ -0.02
VPS28-210ENST00000529182 SUCLA2Q9P2R7 463 aaPredicted RBP14.92□□□□□ -0.02
VPS28-210ENST00000529182 NOC2LQ9Y3T9 749 aaKnown RBP14.92□□□□□ -0.02
VPS28-210ENST00000529182 CDH23Q9H251 3354 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 BMP15O95972 392 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 ZSCAN22P10073 491 aaPredicted RBP14.91□□□□□ -0.02
VPS28-210ENST00000529182 ATP2A2P16615 1042 aaKnown RBP14.91□□□□□ -0.02
VPS28-210ENST00000529182 MARCKSP29966 332 aaPredicted RBP14.91□□□□□ -0.02
VPS28-210ENST00000529182 PBX2P40425 430 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 RFC5P40937 340 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 KCNJ6P48051 423 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 GPC3P51654 580 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 RABGGTBP53611 331 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 BECN1Q14457 450 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 ZRSR1Q15695 479 aaKnown RBP14.91□□□□□ -0.02
VPS28-210ENST00000529182 KRT79Q5XKE5 535 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 ARL6IP4Q66PJ3 421 aaKnown RBP14.91□□□□□ -0.02
VPS28-210ENST00000529182 KSR1Q8IVT5 923 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 SLC7A3Q8WY07 619 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 CCDC43Q96MW1 224 aaKnown RBP14.91□□□□□ -0.02
VPS28-210ENST00000529182 NACC1Q96RE7 527 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 XPNPEP1Q9NQW7 623 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 PADI3Q9ULW8 664 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 KIAA1024Q9UPX6 916 aa14.91□□□□□ -0.02
VPS28-210ENST00000529182 ABHD14A-ACY1A0A1B0GW23 586 aa14.9□□□□□ -0.02
VPS28-210ENST00000529182 USO1O60763 962 aaKnown RBP14.9□□□□□ -0.02
VPS28-210ENST00000529182 F13A1P00488 732 aa14.9□□□□□ -0.02
VPS28-210ENST00000529182 DNM2P50570 870 aa14.9□□□□□ -0.02
VPS28-210ENST00000529182 CRYBB1P53674 252 aaPredicted RBP14.9□□□□□ -0.02
VPS28-210ENST00000529182 SMAD3P84022 425 aaKnown RBP14.9□□□□□ -0.02
VPS28-210ENST00000529182 FAM228AQ86W67 206 aa14.9□□□□□ -0.02
VPS28-210ENST00000529182 RHPN2Q8IUC4 686 aa14.9□□□□□ -0.02
VPS28-210ENST00000529182 NLRP7Q8WX94 980 aa14.9□□□□□ -0.02
VPS28-210ENST00000529182 APBB2Q92870 758 aa14.9□□□□□ -0.02
VPS28-210ENST00000529182 SCLT1Q96NL6 688 aa14.9□□□□□ -0.02
VPS28-210ENST00000529182 PLIN2Q99541 437 aa14.9□□□□□ -0.02
VPS28-210ENST00000529182 MTRQ99707 1265 aa14.9□□□□□ -0.02
VPS28-210ENST00000529182 JPH2Q9BR39 696 aaPredicted RBP14.9□□□□□ -0.02
VPS28-210ENST00000529182 PBX4Q9BYU1 374 aa14.9□□□□□ -0.02
VPS28-210ENST00000529182 DDX19AQ9NUU7 478 aaKnown RBP14.9□□□□□ -0.02
VPS28-210ENST00000529182 PPME1Q9Y570 386 aa14.9□□□□□ -0.02
VPS28-210ENST00000529182 SQORQ9Y6N5 450 aa14.9□□□□□ -0.02
VPS28-210ENST00000529182 ARID2Q68CP9 1835 aa14.89□□□□□ -0.03
VPS28-210ENST00000529182 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.89□□□□□ -0.03
VPS28-210ENST00000529182 E9PMD0 336 aa14.89□□□□□ -0.03
VPS28-210ENST00000529182 CSDE1O75534 798 aaKnown RBP14.89□□□□□ -0.03
VPS28-210ENST00000529182 RPS6KA5O75582 802 aa14.89□□□□□ -0.03
VPS28-210ENST00000529182 XRCC6P12956 609 aaKnown RBP eCLIP14.89□□□□□ -0.037e-6■□□□□ 8.8
VPS28-210ENST00000529182 MYOGP15173 224 aa14.89□□□□□ -0.03
VPS28-210ENST00000529182 FGFR4P22455 802 aa14.89□□□□□ -0.03
VPS28-210ENST00000529182 NFX1Q12986 1120 aaKnown RBP14.89□□□□□ -0.03
VPS28-210ENST00000529182 PAK2Q13177 524 aa14.89□□□□□ -0.03
VPS28-210ENST00000529182 SPECC1Q5M775 1068 aa14.89□□□□□ -0.03
VPS28-210ENST00000529182 FAM117BQ6P1L5 589 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms