RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 ASPRV1Q53RT3 343 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 MCTP2Q6DN12 878 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 TAF2Q6P1X5 1199 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 CCDC171Q6TFL3 1326 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 ANKRD11Q6UB99 2663 aaPredicted RBP6.63□□□□□ -1.35
KDM3B-205ENST00000508386 MFSD6Q6ZSS7 791 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 DTWD2Q8NBA8 298 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 ANKK1Q8NFD2 765 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 FLCNQ8NFG4 579 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 TRAPPC12Q8WVT3 735 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 TMEM40Q8WWA1 233 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 GPATCH3Q96I76 525 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 FAM49AQ9H0Q0 323 aaPredicted RBP6.63□□□□□ -1.35
KDM3B-205ENST00000508386 SENP2Q9HC62 589 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 ERVK-5Q9HDB9 667 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 HELLSQ9NRZ9 838 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 TMEM260Q9NX78 707 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 MAP3K20Q9NYL2 800 aaKnown RBP6.63□□□□□ -1.35
KDM3B-205ENST00000508386 MAD2L2Q9UI95 211 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 TUBE1Q9UJT0 475 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 RALYQ9UKM9 306 aaKnown RBP6.63□□□□□ -1.35
KDM3B-205ENST00000508386 IGSF9BQ9UPX0 1349 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 PCDHB15Q9Y5E8 787 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 R4GN57 208 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 CEP295Q9C0D2 2601 aa6.63□□□□□ -1.35
KDM3B-205ENST00000508386 SPEGQ15772 3267 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 ZMYM6O95789 1325 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 RCCD1A6NED2 376 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 C2orf71A6NGG8 1288 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 B4E1Z4 1266 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 C9IYK1 514 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 KLRF2D3W0D1 207 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 GCOM1H8Y6P7 765 aaPredicted RBP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 ZBTB5O15062 677 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 CLASP2O75122 1294 aaKnown RBP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 PARP1P09874 1014 aaKnown RBP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 POLR2MP0CAP2 368 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 INSRRP14616 1297 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 HOXB8P17481 243 aaPredicted RBP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 ITGB5P18084 799 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 TCF7P36402 384 aaPredicted RBP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 SARSP49591 514 aaKnown RBP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 IGBP1P78318 339 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 HNRNPUQ00839 825 aaKnown RBP eCLIP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 PLCB3Q01970 1234 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 NMIQ13287 307 aaPredicted RBP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 SEC23AQ15436 765 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 ZDHHC14Q8IZN3 488 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 MRPL43Q8N983 215 aaKnown RBP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 MRPS27Q92552 414 aaKnown RBP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 WNT2BQ93097 391 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 PIGSQ96S52 555 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 ZSCAN10Q96SZ4 725 aaPredicted RBP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 TCF25Q9BQ70 676 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 SENP7Q9BQF6 1050 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 CELF4Q9BZC1 486 aaKnown RBP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 SLC24A3Q9HC58 644 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 NOC2LQ9Y3T9 749 aaKnown RBP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 TRPV2Q9Y5S1 764 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 HCFC2Q9Y5Z7 792 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 SQORQ9Y6N5 450 aa6.62□□□□□ -1.35
KDM3B-205ENST00000508386 CNOT1A5YKK6 2376 aaKnown RBP6.62□□□□□ -1.35
KDM3B-205ENST00000508386 KRBA1A5PL33 1030 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 FIBPO43427 364 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 NARSO43776 548 aaKnown RBP6.61□□□□□ -1.35
KDM3B-205ENST00000508386 DHX16O60231 1041 aaKnown RBP6.61□□□□□ -1.35
KDM3B-205ENST00000508386 N4BP1O75113 896 aaKnown RBP6.61□□□□□ -1.35
KDM3B-205ENST00000508386 LMNAP02545 664 aaKnown RBP6.61□□□□□ -1.35
KDM3B-205ENST00000508386 STAG3L1P0CL83 205 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 MX1P20591 662 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 DSC3Q14574 896 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 PUM1Q14671 1186 aaKnown RBP eCLIP6.61□□□□□ -1.35
KDM3B-205ENST00000508386 RARS2Q5T160 578 aaKnown RBP6.61□□□□□ -1.35
KDM3B-205ENST00000508386 USP17L6PQ6QN14 398 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 CYB5R4Q7L1T6 521 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 THNSL1Q8IYQ7 743 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 MAML2Q8IZL2 1156 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-205ENST00000508386 SAMD3Q8N6K7 520 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 SLC22A17Q8WUG5 538 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 RIN2Q8WYP3 895 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-205ENST00000508386 ESR2Q92731 530 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 CASD1Q96PB1 797 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 ADAM2Q99965 735 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 FTHL17Q9BXU8 183 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 RIOX1Q9H6W3 641 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 KAT14Q9H8E8 782 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 RGS18Q9NS28 235 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 DLGAP2Q9P1A6 1054 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 ZNF215Q9UL58 517 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-205ENST00000508386 LZTS1Q9Y250 596 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 NR2E1Q9Y466 385 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 PCDHB12Q9Y5F1 795 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 PCDHA2Q9Y5H9 948 aa6.61□□□□□ -1.35
KDM3B-205ENST00000508386 FANCMQ8IYD8 2048 aa6.6□□□□□ -1.35
KDM3B-205ENST00000508386 KDM3AQ9Y4C1 1321 aa6.6□□□□□ -1.35
KDM3B-205ENST00000508386 ZBTB42B2RXF5 422 aa6.6□□□□□ -1.35
KDM3B-205ENST00000508386 MEIS2O14770 477 aa6.6□□□□□ -1.35
KDM3B-205ENST00000508386 EOMESO95936 686 aa6.6□□□□□ -1.35
KDM3B-205ENST00000508386 PCP11498 1178 aaKnown RBP6.6□□□□□ -1.35
KDM3B-205ENST00000508386 MS4A1P11836 297 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms