RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 ELAC1Q9H777 363 aaKnown RBP20.45■□□□□ 0.86
CLDND1-217ENST00000508071 RBM28Q9NW13 759 aaKnown RBP20.45■□□□□ 0.86
CLDND1-217ENST00000508071 CNTNAP5Q8WYK1 1306 aa20.45■□□□□ 0.86
CLDND1-217ENST00000508071 CFAP54Q96N23 3096 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 SREBF1P36956 1147 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 FAM189BP81408 668 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 PLCB3Q01970 1234 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 AP3B2Q13367 1082 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 TYW1BQ6NUM6 668 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 LLGL2Q6P1M3 1020 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 FAM228AQ86W67 206 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 CKAP2LQ8IYA6 745 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 RASGRP4Q8TDF6 673 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 TCF25Q9BQ70 676 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 APOL5Q9BWW9 433 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 LSG1Q9H089 658 aaKnown RBP20.44■□□□□ 0.86
CLDND1-217ENST00000508071 GLT8D2Q9H1C3 349 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 S1PR5Q9H228 398 aa20.44■□□□□ 0.86
CLDND1-217ENST00000508071 NGRNQ9NPE2 291 aaKnown RBP20.44■□□□□ 0.86
CLDND1-217ENST00000508071 SMCO2A6NFE2 343 aa20.43■□□□□ 0.86
CLDND1-217ENST00000508071 ZBTB42B2RXF5 422 aa20.43■□□□□ 0.86
CLDND1-217ENST00000508071 hCG_1984214I3L0E3 225 aa20.43■□□□□ 0.86
CLDND1-217ENST00000508071 HOXA2O43364 376 aa20.43■□□□□ 0.86
CLDND1-217ENST00000508071 C22orf31O95567 290 aa20.43■□□□□ 0.86
CLDND1-217ENST00000508071 HOXB8P17481 243 aaPredicted RBP20.43■□□□□ 0.86
CLDND1-217ENST00000508071 AVPR2P30518 371 aa20.43■□□□□ 0.86
CLDND1-217ENST00000508071 KCNC3Q14003 757 aa20.43■□□□□ 0.86
CLDND1-217ENST00000508071 CREB3L3Q68CJ9 461 aa20.43■□□□□ 0.86
CLDND1-217ENST00000508071 SWSAP1Q6NVH7 229 aa20.43■□□□□ 0.86
CLDND1-217ENST00000508071 SYCE2Q6PIF2 218 aa20.43■□□□□ 0.86
CLDND1-217ENST00000508071 METTL13Q8N6R0 699 aa20.43■□□□□ 0.86
CLDND1-217ENST00000508071 ZNF713Q8N859 430 aaPredicted RBP20.43■□□□□ 0.86
CLDND1-217ENST00000508071 ATOH1Q92858 354 aaPredicted RBP20.43■□□□□ 0.86
CLDND1-217ENST00000508071 TMEM117Q9H0C3 514 aa20.43■□□□□ 0.86
CLDND1-217ENST00000508071 FAM86C1Q9NVL1 165 aa20.43■□□□□ 0.86
CLDND1-217ENST00000508071 VTNP04004 478 aa20.42■□□□□ 0.86
CLDND1-217ENST00000508071 SP100P23497 879 aaPredicted RBP20.42■□□□□ 0.86
CLDND1-217ENST00000508071 PPM1AP35813 382 aa20.42■□□□□ 0.86
CLDND1-217ENST00000508071 KRT17Q04695 432 aa20.42■□□□□ 0.86
CLDND1-217ENST00000508071 KCNT2Q6UVM3 1135 aa20.42■□□□□ 0.86
CLDND1-217ENST00000508071 PLA2G4DQ86XP0 818 aa20.42■□□□□ 0.86
CLDND1-217ENST00000508071 ABI1Q8IZP0 508 aa20.42■□□□□ 0.86
CLDND1-217ENST00000508071 BBXQ8WY36 941 aaPredicted RBP20.42■□□□□ 0.86
CLDND1-217ENST00000508071 SNX27Q96L92 541 aa20.42■□□□□ 0.86
CLDND1-217ENST00000508071 ZNF558Q96NG5 402 aa20.42■□□□□ 0.86
CLDND1-217ENST00000508071 TSHZ2Q9NRE2 1034 aa20.42■□□□□ 0.86
CLDND1-217ENST00000508071 NR2E1Q9Y466 385 aa20.42■□□□□ 0.86
CLDND1-217ENST00000508071 V9GY48 417 aaPredicted RBP20.42■□□□□ 0.86
CLDND1-217ENST00000508071 HIDE1A8MVS5 230 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 IPO5O00410 1097 aaKnown RBP20.41■□□□□ 0.86
CLDND1-217ENST00000508071 GFRA3O60609 400 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 GPR32O75388 356 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 ATP4AP20648 1035 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 DSC3Q14574 896 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 RTN1Q16799 776 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 APOA5Q6Q788 366 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 TRMT1LQ7Z2T5 733 aaKnown RBP20.41■□□□□ 0.86
CLDND1-217ENST00000508071 TMC7Q7Z402 723 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 LRRC43Q8N309 656 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 CASP10Q92851 521 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 YTHDC1Q96MU7 727 aaKnown RBP20.41■□□□□ 0.86
CLDND1-217ENST00000508071 CASD1Q96PB1 797 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 BARHL2Q9NY43 387 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 TCEAL9Q9UHQ7 104 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 MYO10Q9HD67 2058 aa20.41■□□□□ 0.86
CLDND1-217ENST00000508071 FAM86B1E9PN63 330 aa20.4■□□□□ 0.86
CLDND1-217ENST00000508071 DHX15O43143 795 aaKnown RBP20.4■□□□□ 0.86
CLDND1-217ENST00000508071 FAM86B2P0C5J1 330 aa20.4■□□□□ 0.86
CLDND1-217ENST00000508071 ZSCAN20P17040 1043 aaPredicted RBP20.4■□□□□ 0.86
CLDND1-217ENST00000508071 CLK2P49760 499 aaKnown RBP20.4■□□□□ 0.86
CLDND1-217ENST00000508071 NECTIN1Q15223 517 aa20.4■□□□□ 0.86
CLDND1-217ENST00000508071 TPRNQ4KMQ1 711 aa20.4■□□□□ 0.86
CLDND1-217ENST00000508071 ZNF577Q9BSK1 485 aa20.4■□□□□ 0.86
CLDND1-217ENST00000508071 SPG21Q9NZD8 308 aa20.4■□□□□ 0.86
CLDND1-217ENST00000508071 CEP131Q9UPN4 1083 aa20.4■□□□□ 0.86
CLDND1-217ENST00000508071 ZBTB43O43298 467 aa20.39■□□□□ 0.85
CLDND1-217ENST00000508071 NUBP1P53384 320 aa20.39■□□□□ 0.85
CLDND1-217ENST00000508071 JAKMIP3Q5VZ66 844 aa20.39■□□□□ 0.85
CLDND1-217ENST00000508071 CES5AQ6NT32 575 aa20.39■□□□□ 0.85
CLDND1-217ENST00000508071 ZNF746Q6NUN9 644 aaPredicted RBP20.39■□□□□ 0.85
CLDND1-217ENST00000508071 LRRC55Q6ZSA7 311 aa20.39■□□□□ 0.85
CLDND1-217ENST00000508071 KREMEN2Q8NCW0 462 aa20.39■□□□□ 0.85
CLDND1-217ENST00000508071 RIPOR3Q96MK2 946 aa20.39■□□□□ 0.85
CLDND1-217ENST00000508071 MAP7D2Q96T17 732 aa20.39■□□□□ 0.85
CLDND1-217ENST00000508071 ESYT1Q9BSJ8 1104 aa20.39■□□□□ 0.85
CLDND1-217ENST00000508071 TBC1D22BQ9NU19 505 aa20.39■□□□□ 0.85
CLDND1-217ENST00000508071 AKT3Q9Y243 479 aa20.39■□□□□ 0.85
CLDND1-217ENST00000508071 MAFBQ9Y5Q3 323 aaPredicted RBP20.39■□□□□ 0.85
CLDND1-217ENST00000508071 MAGEB2O15479 319 aa20.38■□□□□ 0.85
CLDND1-217ENST00000508071 PSAPP07602 524 aa20.38■□□□□ 0.85
CLDND1-217ENST00000508071 PBX3P40426 434 aa20.38■□□□□ 0.85
CLDND1-217ENST00000508071 CLCN3P51790 818 aa20.38■□□□□ 0.85
CLDND1-217ENST00000508071 NLRP11P59045 1033 aaKnown RBP20.38■□□□□ 0.85
CLDND1-217ENST00000508071 FUT2Q10981 343 aa20.38■□□□□ 0.85
CLDND1-217ENST00000508071 MTMR3Q13615 1198 aa20.38■□□□□ 0.85
CLDND1-217ENST00000508071 SMC1AQ14683 1233 aaKnown RBP20.38■□□□□ 0.85
CLDND1-217ENST00000508071 SMAP1Q8IYB5 467 aaPredicted RBP20.38■□□□□ 0.85
CLDND1-217ENST00000508071 NECTIN4Q96NY8 510 aa20.38■□□□□ 0.85
CLDND1-217ENST00000508071 ANO2Q9NQ90 1003 aa20.38■□□□□ 0.85
CLDND1-217ENST00000508071 RNF19AQ9NV58 838 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms