RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 OTUD6AQ7L8S5 288 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 ZNF668Q96K58 619 aaPredicted RBP15.18■□□□□ 0.02
FDPS-219ENST00000495308 CXXC1Q9P0U4 656 aaPredicted RBP15.18■□□□□ 0.02
FDPS-219ENST00000495308 AKT3Q9Y243 479 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 GINS2Q9Y248 185 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 TRPV2Q9Y5S1 764 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 CDH23Q9H251 3354 aa15.18■□□□□ 0.02
FDPS-219ENST00000495308 CHD7Q9P2D1 2997 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 IGKV6-21A0A0C4DH24 114 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 ZBBXA8MT70 800 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 BMP15O95972 392 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 RPLP2P05387 115 aaKnown RBP15.17■□□□□ 0.02
FDPS-219ENST00000495308 TMOD1P28289 359 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 MARCKSP29966 332 aaPredicted RBP15.17■□□□□ 0.02
FDPS-219ENST00000495308 POLGP54098 1239 aaPredicted RBP15.17■□□□□ 0.02
FDPS-219ENST00000495308 MKRN4PQ13434 485 aaPredicted RBP15.17■□□□□ 0.02
FDPS-219ENST00000495308 LPIN1Q14693 890 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 KIZQ2M2Z5 673 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 FBXO47Q5MNV8 452 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 IER5Q5VY09 327 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 CNKSR3Q6P9H4 555 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 NME8Q8N427 588 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 HERVK_113Q902F9 699 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 CCDC43Q96MW1 224 aaKnown RBP15.17■□□□□ 0.02
FDPS-219ENST00000495308 MAP7D2Q96T17 732 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 MMTAG2Q9BU76 263 aaKnown RBP15.17■□□□□ 0.02
FDPS-219ENST00000495308 CELF4Q9BZC1 486 aaKnown RBP15.17■□□□□ 0.02
FDPS-219ENST00000495308 CDHR5Q9HBB8 845 aa15.17■□□□□ 0.02
FDPS-219ENST00000495308 DAXXQ9UER7 740 aaPredicted RBP15.17■□□□□ 0.02
FDPS-219ENST00000495308 ACTN1P12814 892 aa15.16■□□□□ 0.02
FDPS-219ENST00000495308 PDIA4P13667 645 aaKnown RBP15.16■□□□□ 0.02
FDPS-219ENST00000495308 RARRES1P49788 294 aa15.16■□□□□ 0.02
FDPS-219ENST00000495308 EMC2Q15006 297 aa15.16■□□□□ 0.02
FDPS-219ENST00000495308 ZRSR1Q15695 479 aaKnown RBP15.16■□□□□ 0.02
FDPS-219ENST00000495308 PLEKHG4Q58EX7 1191 aa15.16■□□□□ 0.02
FDPS-219ENST00000495308 KRT79Q5XKE5 535 aa15.16■□□□□ 0.02
FDPS-219ENST00000495308 DBF4BQ8NFT6 615 aa15.16■□□□□ 0.02
FDPS-219ENST00000495308 SLC7A3Q8WY07 619 aa15.16■□□□□ 0.02
FDPS-219ENST00000495308 OSMRQ99650 979 aa15.16■□□□□ 0.02
FDPS-219ENST00000495308 DHX33Q9H6R0 707 aaKnown RBP15.16■□□□□ 0.02
FDPS-219ENST00000495308 ANKEF1Q9NU02 776 aa15.16■□□□□ 0.02
FDPS-219ENST00000495308 DDX19AQ9NUU7 478 aaKnown RBP15.16■□□□□ 0.02
FDPS-219ENST00000495308 TFIP11Q9UBB9 837 aaKnown RBP15.16■□□□□ 0.02
FDPS-219ENST00000495308 KIAA1024Q9UPX6 916 aa15.16■□□□□ 0.02
FDPS-219ENST00000495308 ZDHHC9Q9Y397 364 aa15.16■□□□□ 0.02
FDPS-219ENST00000495308 MYH11P35749 1972 aa15.16■□□□□ 0.02
FDPS-219ENST00000495308 SOX1O00570 391 aaPredicted RBP15.15■□□□□ 0.02
FDPS-219ENST00000495308 GPR32O75388 356 aa15.15■□□□□ 0.02
FDPS-219ENST00000495308 CD52P31358 61 aa15.15■□□□□ 0.02
FDPS-219ENST00000495308 RFC5P40937 340 aa15.15■□□□□ 0.02
FDPS-219ENST00000495308 NLRP11P59045 1033 aaKnown RBP15.15■□□□□ 0.02
FDPS-219ENST00000495308 RASIP1Q5U651 963 aa15.15■□□□□ 0.02
FDPS-219ENST00000495308 FAM109BQ6ICB4 259 aaPredicted RBP15.15■□□□□ 0.02
FDPS-219ENST00000495308 TMEM40Q8WWA1 233 aa15.15■□□□□ 0.02
FDPS-219ENST00000495308 TMEM143Q96AN5 459 aa15.15■□□□□ 0.02
FDPS-219ENST00000495308 NACC1Q96RE7 527 aa15.15■□□□□ 0.02
FDPS-219ENST00000495308 PLIN2Q99541 437 aa15.15■□□□□ 0.02
FDPS-219ENST00000495308 IFIH1Q9BYX4 1025 aaKnown RBP15.15■□□□□ 0.02
FDPS-219ENST00000495308 AGO3Q9H9G7 860 aaKnown RBP15.15■□□□□ 0.02
FDPS-219ENST00000495308 SUCLA2Q9P2R7 463 aaPredicted RBP15.15■□□□□ 0.02
FDPS-219ENST00000495308 FBXO2Q9UK22 296 aaPredicted RBP15.15■□□□□ 0.02
FDPS-219ENST00000495308 PPME1Q9Y570 386 aa15.15■□□□□ 0.02
FDPS-219ENST00000495308 KDM3AQ9Y4C1 1321 aa15.15■□□□□ 0.02
FDPS-219ENST00000495308 TRANK1O15050 2925 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 E9PMD0 336 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 USO1O60763 962 aaKnown RBP15.14■□□□□ 0.01
FDPS-219ENST00000495308 BRD1O95696 1058 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 NASPP49321 788 aaPredicted RBP15.14■□□□□ 0.01
FDPS-219ENST00000495308 DNM2P50570 870 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 GPC3P51654 580 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 STK38Q15208 465 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 LRIT3Q3SXY7 679 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 TSHZ1Q6ZSZ6 1077 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 KCNK18Q7Z418 384 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 CABP7Q86V35 215 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 RHPN2Q8IUC4 686 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 KSR1Q8IVT5 923 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 SEPT8Q92599 483 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 ZNF396Q96N95 335 aaPredicted RBP15.14■□□□□ 0.01
FDPS-219ENST00000495308 CLIC6Q96NY7 704 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 PNMA5Q96PV4 448 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 MTRQ99707 1265 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 JPH2Q9BR39 696 aaPredicted RBP15.14■□□□□ 0.01
FDPS-219ENST00000495308 CSRNP2Q9H175 543 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 MTIF3Q9H2K0 278 aaKnown RBP15.14■□□□□ 0.01
FDPS-219ENST00000495308 XPNPEP1Q9NQW7 623 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 DBR1Q9UK59 544 aaKnown RBP15.14■□□□□ 0.01
FDPS-219ENST00000495308 NOC2LQ9Y3T9 749 aaKnown RBP15.14■□□□□ 0.01
FDPS-219ENST00000495308 STK24Q9Y6E0 443 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 SLC4A7Q9Y6M7 1214 aa15.14■□□□□ 0.01
FDPS-219ENST00000495308 GRXCR1A8MXD5 290 aa15.13■□□□□ 0.01
FDPS-219ENST00000495308 BAIAP3O94812 1187 aa15.13■□□□□ 0.01
FDPS-219ENST00000495308 XRCC6P12956 609 aaKnown RBP eCLIP15.13■□□□□ 0.01
FDPS-219ENST00000495308 MUTP22033 750 aa15.13■□□□□ 0.01
FDPS-219ENST00000495308 LONP1P36776 959 aaKnown RBP15.13■□□□□ 0.01
FDPS-219ENST00000495308 CRYBB1P53674 252 aaPredicted RBP15.13■□□□□ 0.01
FDPS-219ENST00000495308 WDR5P61964 334 aaKnown RBP15.13■□□□□ 0.01
FDPS-219ENST00000495308 PAK2Q13177 524 aa15.13■□□□□ 0.01
FDPS-219ENST00000495308 IKBKEQ14164 716 aa15.13■□□□□ 0.01
FDPS-219ENST00000495308 SLC39A14Q15043 492 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms