RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 SWSAP1Q6NVH7 229 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 TMEM184AQ6ZMB5 413 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 PLA2G4DQ86XP0 818 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 ASIC4Q96FT7 647 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 TMEM117Q9H0C3 514 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 S1PR5Q9H228 398 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 CWH43Q9H720 699 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 TSHZ2Q9NRE2 1034 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 FAM86C1Q9NVL1 165 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 HCSTQ9UBK5 93 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 FNDC1Q4ZHG4 1894 aaPredicted RBP16.2■□□□□ 0.18
VARS-228ENST00000495010 hCG_1984214I3L0E3 225 aa16.19■□□□□ 0.18
VARS-228ENST00000495010 CCNE2O96020 404 aa16.19■□□□□ 0.18
VARS-228ENST00000495010 ZSCAN20P17040 1043 aaPredicted RBP16.19■□□□□ 0.18
VARS-228ENST00000495010 HOXB8P17481 243 aaPredicted RBP16.19■□□□□ 0.18
VARS-228ENST00000495010 CA8P35219 290 aa16.19■□□□□ 0.18
VARS-228ENST00000495010 PPM1AP35813 382 aa16.19■□□□□ 0.18
VARS-228ENST00000495010 SREBF1P36956 1147 aa16.19■□□□□ 0.18
VARS-228ENST00000495010 VCPP55072 806 aaKnown RBP16.19■□□□□ 0.18
VARS-228ENST00000495010 CES5AQ6NT32 575 aa16.19■□□□□ 0.18
VARS-228ENST00000495010 NIPA1Q7RTP0 329 aa16.19■□□□□ 0.18
VARS-228ENST00000495010 TRMT1LQ7Z2T5 733 aaKnown RBP16.19■□□□□ 0.18
VARS-228ENST00000495010 TMC7Q7Z402 723 aa16.19■□□□□ 0.18
VARS-228ENST00000495010 FAM228AQ86W67 206 aa16.19■□□□□ 0.18
VARS-228ENST00000495010 CCDC60Q8IWA6 550 aaPredicted RBP16.19■□□□□ 0.18
VARS-228ENST00000495010 ZNF713Q8N859 430 aaPredicted RBP16.19■□□□□ 0.18
VARS-228ENST00000495010 RASGRP4Q8TDF6 673 aa16.19■□□□□ 0.18
VARS-228ENST00000495010 BBXQ8WY36 941 aaPredicted RBP16.19■□□□□ 0.18
VARS-228ENST00000495010 CASP10Q92851 521 aa16.19■□□□□ 0.18
VARS-228ENST00000495010 SNX27Q96L92 541 aa16.19■□□□□ 0.18
VARS-228ENST00000495010 YTHDC1Q96MU7 727 aaKnown RBP16.19■□□□□ 0.18
VARS-228ENST00000495010 ZNF558Q96NG5 402 aa16.19■□□□□ 0.18
VARS-228ENST00000495010 C5orf42Q9H799 3197 aa16.18■□□□□ 0.18
VARS-228ENST00000495010 VTNP04004 478 aa16.18■□□□□ 0.18
VARS-228ENST00000495010 FAM189BP81408 668 aa16.18■□□□□ 0.18
VARS-228ENST00000495010 BMS1Q14692 1282 aaKnown RBP16.18■□□□□ 0.18
VARS-228ENST00000495010 TPRNQ4KMQ1 711 aa16.18■□□□□ 0.18
VARS-228ENST00000495010 CREB3L3Q68CJ9 461 aa16.18■□□□□ 0.18
VARS-228ENST00000495010 KCNT2Q6UVM3 1135 aa16.18■□□□□ 0.18
VARS-228ENST00000495010 SGMS1Q86VZ5 419 aa16.18■□□□□ 0.18
VARS-228ENST00000495010 LRRC43Q8N309 656 aa16.18■□□□□ 0.18
VARS-228ENST00000495010 MAP7D2Q96T17 732 aa16.18■□□□□ 0.18
VARS-228ENST00000495010 SPG21Q9NZD8 308 aa16.18■□□□□ 0.18
VARS-228ENST00000495010 CEP131Q9UPN4 1083 aa16.18■□□□□ 0.18
VARS-228ENST00000495010 AKT3Q9Y243 479 aa16.18■□□□□ 0.18
VARS-228ENST00000495010 V9GY48 417 aaPredicted RBP16.18■□□□□ 0.18
VARS-228ENST00000495010 CNTNAP5Q8WYK1 1306 aa16.18■□□□□ 0.18
VARS-228ENST00000495010 KMT2EQ8IZD2 1858 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 HIDE1A8MVS5 230 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 IPO5O00410 1097 aaKnown RBP16.17■□□□□ 0.18
VARS-228ENST00000495010 C22orf31O95567 290 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 TMOD1P28289 359 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 NUBP1P53384 320 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 SMC1AQ14683 1233 aaKnown RBP16.17■□□□□ 0.18
VARS-228ENST00000495010 RTN1Q16799 776 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 TYW1BQ6NUM6 668 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 SYCE2Q6PIF2 218 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 TMEM87AQ8NBN3 555 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 RNF169Q8NCN4 708 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 KREMEN2Q8NCW0 462 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 RIPOR3Q96MK2 946 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 CASD1Q96PB1 797 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 ZNF577Q9BSK1 485 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 LSG1Q9H089 658 aaKnown RBP16.17■□□□□ 0.18
VARS-228ENST00000495010 TBC1D22BQ9NU19 505 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 BARHL2Q9NY43 387 aa16.17■□□□□ 0.18
VARS-228ENST00000495010 H0Y858 1186 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 MAGEB2O15479 319 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 ZBTB43O43298 467 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 GPR32O75388 356 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 PSAPP07602 524 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 MTMR3Q13615 1198 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 KCNC3Q14003 757 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 DSC3Q14574 896 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 RNF20Q5VTR2 975 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 JAKMIP3Q5VZ66 844 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 APOA5Q6Q788 366 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 UBALD2Q8IYN6 164 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 SCLT1Q96NL6 688 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 NECTIN4Q96NY8 510 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 ANO2Q9NQ90 1003 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 SORCS3Q9UPU3 1222 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 SAMM50Q9Y512 469 aa16.16■□□□□ 0.18
VARS-228ENST00000495010 ZBTB42B2RXF5 422 aa16.15■□□□□ 0.18
VARS-228ENST00000495010 FAM86B1E9PN63 330 aa16.15■□□□□ 0.18
VARS-228ENST00000495010 FAM86B2P0C5J1 330 aa16.15■□□□□ 0.18
VARS-228ENST00000495010 ATP4AP20648 1035 aa16.15■□□□□ 0.18
VARS-228ENST00000495010 PBX3P40426 434 aa16.15■□□□□ 0.18
VARS-228ENST00000495010 CLCN3P51790 818 aa16.15■□□□□ 0.18
VARS-228ENST00000495010 NLRP11P59045 1033 aaKnown RBP16.15■□□□□ 0.18
VARS-228ENST00000495010 SETQ01105 290 aaPredicted RBP16.15■□□□□ 0.18
VARS-228ENST00000495010 ITIH3Q06033 890 aa16.15■□□□□ 0.18
VARS-228ENST00000495010 COL9A3Q14050 684 aaPredicted RBP16.15■□□□□ 0.18
VARS-228ENST00000495010 ZNF746Q6NUN9 644 aaPredicted RBP16.15■□□□□ 0.18
VARS-228ENST00000495010 EFCAB12Q6NXP0 572 aa16.15■□□□□ 0.18
VARS-228ENST00000495010 LRRC55Q6ZSA7 311 aa16.15■□□□□ 0.18
VARS-228ENST00000495010 SMAP1Q8IYB5 467 aaPredicted RBP16.15■□□□□ 0.18
VARS-228ENST00000495010 ZNF710Q8N1W2 664 aa16.15■□□□□ 0.18
VARS-228ENST00000495010 EVPLQ92817 2033 aa16.15■□□□□ 0.18
VARS-228ENST00000495010 FAM167AQ96KS9 214 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms