RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 MKRN4PQ13434 485 aaPredicted RBP8.4□□□□□ -1.06
CPNE1-226ENST00000486021 PCBP1Q15365 356 aaKnown RBP eCLIP8.4□□□□□ -1.06
CPNE1-226ENST00000486021 LETM2Q2VYF4 491 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 LEXMQ3ZCV2 418 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 EP400NLQ6ZTU2 488 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 ZNF410Q86VK4 478 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 TMEM87AQ8NBN3 555 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 NEK9Q8TD19 979 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 NLRP7Q8WX94 980 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 SLC7A3Q8WY07 619 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 SLC5A5Q92911 643 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 ZNF689Q96CS4 500 aaPredicted RBP8.4□□□□□ -1.06
CPNE1-226ENST00000486021 PABPC5Q96DU9 382 aaKnown RBP8.4□□□□□ -1.06
CPNE1-226ENST00000486021 ZSCAN31Q96LW9 406 aaPredicted RBP8.4□□□□□ -1.06
CPNE1-226ENST00000486021 ADAM2Q99965 735 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 C17orf80Q9BSJ5 609 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 PHF20Q9BVI0 1012 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 MRPL9Q9BYD2 267 aaKnown RBP8.4□□□□□ -1.06
CPNE1-226ENST00000486021 UBE2ZQ9H832 354 aaPredicted RBP8.4□□□□□ -1.06
CPNE1-226ENST00000486021 PRDM6Q9NQX0 595 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 TMEM161AQ9NX61 479 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 ORC3Q9UBD5 711 aaPredicted RBP8.4□□□□□ -1.06
CPNE1-226ENST00000486021 PRKAG3Q9UGI9 489 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 SEPT9Q9UHD8 586 aaPredicted RBP8.4□□□□□ -1.06
CPNE1-226ENST00000486021 STK24Q9Y6E0 443 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 PLXNA4Q9HCM2 1894 aa8.4□□□□□ -1.07
CPNE1-226ENST00000486021 ARID2Q68CP9 1835 aa8.4□□□□□ -1.07
CPNE1-226ENST00000486021 COL6A3P12111 3177 aa8.4□□□□□ -1.07
CPNE1-226ENST00000486021 TDRD15B5MCY1 1934 aaKnown RBP8.39□□□□□ -1.07
CPNE1-226ENST00000486021 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.39□□□□□ -1.07
CPNE1-226ENST00000486021 CHMP2AO43633 222 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 PSMD10O75832 226 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 C22orf31O95567 290 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 CCNE2O96020 404 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 MMP1P03956 469 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 ALADP13716 330 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 RFC5P40937 340 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 QARSP47897 775 aaKnown RBP8.39□□□□□ -1.07
CPNE1-226ENST00000486021 RAB27AP51159 221 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 NLRP11P59045 1033 aaKnown RBP8.39□□□□□ -1.07
CPNE1-226ENST00000486021 PRKCEQ02156 737 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 GNL2Q13823 731 aaKnown RBP8.39□□□□□ -1.07
CPNE1-226ENST00000486021 TRMT1LQ7Z2T5 733 aaKnown RBP8.39□□□□□ -1.07
CPNE1-226ENST00000486021 TMCO2Q7Z6W1 182 aaPredicted RBP8.39□□□□□ -1.07
CPNE1-226ENST00000486021 SKAP1Q86WV1 359 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 HACE1Q8IYU2 909 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 KIAA0319LQ8IZA0 1049 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 MICAL1Q8TDZ2 1067 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 TRAPPC12Q8WVT3 735 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 PGBD4Q96DM1 585 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 CDCA3Q99618 268 aaPredicted RBP8.39□□□□□ -1.07
CPNE1-226ENST00000486021 NIFKQ9BYG3 293 aaKnown RBP8.39□□□□□ -1.07
CPNE1-226ENST00000486021 ST3GAL5Q9UNP4 418 aa8.39□□□□□ -1.07
CPNE1-226ENST00000486021 PRRC2BQ5JSZ5 2229 aaKnown RBP8.39□□□□□ -1.07
CPNE1-226ENST00000486021 DDX11L8A8MPP1 907 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 BMP1P13497 986 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 NEK4P51957 841 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 POLGP54098 1239 aaPredicted RBP8.38□□□□□ -1.07
CPNE1-226ENST00000486021 HMGN5P82970 282 aaKnown RBP8.38□□□□□ -1.07
CPNE1-226ENST00000486021 SCRN1Q12765 414 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 PPP2R5CQ13362 524 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 ORC2Q13416 577 aaPredicted RBP8.38□□□□□ -1.07
CPNE1-226ENST00000486021 GIT2Q14161 759 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 TFDP1Q14186 410 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 EPHA7Q15375 998 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 INF2Q27J81 1249 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 KIZQ2M2Z5 673 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 MTERF2Q49AM1 385 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 THNSL1Q8IYQ7 743 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 FAM184AQ8NB25 1140 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 CNNM3Q8NE01 707 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 RASGRP4Q8TDF6 673 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 OSMRQ99650 979 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 RAB34Q9BZG1 259 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 TMEM117Q9H0C3 514 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 UNC45AQ9H3U1 944 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 ZSWIM4Q9H7M6 989 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 AGO3Q9H9G7 860 aaKnown RBP8.38□□□□□ -1.07
CPNE1-226ENST00000486021 ERVK-5Q9HDB9 667 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 UBN1Q9NPG3 1134 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 CLDND1Q9NY35 253 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 PCDHA12Q9UN75 941 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 LZTS1Q9Y250 596 aa8.38□□□□□ -1.07
CPNE1-226ENST00000486021 NOC2LQ9Y3T9 749 aaKnown RBP8.38□□□□□ -1.07
CPNE1-226ENST00000486021 ATG2AQ2TAZ0 1938 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 EPOPA6NHQ4 379 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 TBKBP1A7MCY6 615 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 M0R2N6 131 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 GPR32O75388 356 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 MAFO75444 373 aaPredicted RBP8.37□□□□□ -1.07
CPNE1-226ENST00000486021 NR1I2O75469 434 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 VTNP04004 478 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 KCNA5P22460 613 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 AXLP30530 894 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 SSTR3P32745 418 aaPredicted RBP8.37□□□□□ -1.07
CPNE1-226ENST00000486021 ALDH7A1P49419 539 aaKnown RBP8.37□□□□□ -1.07
CPNE1-226ENST00000486021 GPC3P51654 580 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 AK2P54819 239 aa8.37□□□□□ -1.07
CPNE1-226ENST00000486021 COL9A3Q14050 684 aaPredicted RBP8.37□□□□□ -1.07
CPNE1-226ENST00000486021 MXD4Q14582 209 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms