RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TRIM33Q9UPN9 1127 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CEP83Q9Y592 693 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 CORINQ9Y5Q5 1042 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 ABCA5Q8WWZ7 1642 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 FRMPD1Q5SYB0 1578 aa3.29□□□□□ -1.88
HMGN4-202ENST00000477243 TOP2AP11388 1531 aaKnown RBP3.29□□□□□ -1.88
HMGN4-202ENST00000477243 C5orf42Q9H799 3197 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 CCDC196A0A1B0GTZ2 297 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 PTPDC1A2A3K4 754 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 BLACEA4D250 179 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 A6NLC8 198 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 TRIM64CA6NLI5 447 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 CHURC1-FNTBB4DL54 471 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 C19orf81C9J6K1 198 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 DDX3XO00571 662 aaKnown RBP eCLIP3.28□□□□□ -1.885e-32■■■■■ 43
HMGN4-202ENST00000477243 WNT7AO00755 349 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 HOXC11O43248 304 aaPredicted RBP3.28□□□□□ -1.88
HMGN4-202ENST00000477243 SIAH2O43255 324 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 FRS3O43559 492 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 B3GALT2O43825 422 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 MAN1A2O60476 641 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 SMNDC1O75940 238 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGN4-202ENST00000477243 FGF18O76093 207 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 INMTO95050 263 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 SCG5P05408 212 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 APOA4P06727 396 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 GSTP1P09211 210 aaKnown RBP3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ITGA4P13612 1032 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ATF7P17544 494 aaPredicted RBP3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ALOX12P18054 663 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 PTPRAP18433 802 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ATP4AP20648 1035 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 PDCP20941 246 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 IL12RB1P42701 662 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 NPTX2P47972 431 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 AGFG1P52594 562 aaKnown RBP3.28□□□□□ -1.88
HMGN4-202ENST00000477243 GFRA1P56159 465 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 PHC1P78364 1004 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 CALD1Q05682 793 aaKnown RBP3.28□□□□□ -1.88
HMGN4-202ENST00000477243 FOXO1Q12778 655 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 PTPN14Q15678 1187 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 NTRK3Q16288 839 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ZNF423Q2M1K9 1284 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 PGS1Q32NB8 556 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 DNAJC21Q5F1R6 531 aaKnown RBP3.28□□□□□ -1.88
HMGN4-202ENST00000477243 FAM47CQ5HY64 1035 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 LRCH2Q5VUJ6 765 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 SLC6A19Q695T7 634 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 APOA5Q6Q788 366 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 NPNTQ6UXI9 565 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ADAMTSL4Q6UY14 1074 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 SYDE1Q6ZW31 735 aaPredicted RBP3.28□□□□□ -1.88
HMGN4-202ENST00000477243 USP53Q70EK8 1073 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 PDZD3Q86UT5 571 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 VSIG1Q86XK7 387 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 CEP57L1Q8IYX8 460 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 NRSN1Q8IZ57 195 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ZNF687Q8N1G0 1237 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 GALNT15Q8N3T1 639 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 PRR18Q8N4B5 295 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ARHGEF39Q8N4T4 335 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ZNF513Q8N8E2 541 aaPredicted RBP3.28□□□□□ -1.88
HMGN4-202ENST00000477243 APPL2Q8NEU8 664 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ZMIZ2Q8NF64 920 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 FLCNQ8NFG4 579 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 STK35Q8TDR2 534 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 RFFLQ8WZ73 363 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 JADE3Q92613 823 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 KIAA1191Q96A73 305 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 PLPPR2Q96GM1 343 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ACAP3Q96P50 834 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ASB2Q96Q27 587 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ADPGKQ9BRR6 497 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 FAM167BQ9BTA0 163 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ANP32EQ9BTT0 268 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 CENPOQ9BU64 300 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 APOL5Q9BWW9 433 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 STK31Q9BXU1 1019 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 CELF4Q9BZC1 486 aaKnown RBP3.28□□□□□ -1.88
HMGN4-202ENST00000477243 GTPBP4Q9BZE4 634 aaKnown RBP3.28□□□□□ -1.88
HMGN4-202ENST00000477243 SMOC1Q9H4F8 434 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ZNF395Q9H8N7 513 aaPredicted RBP3.28□□□□□ -1.88
HMGN4-202ENST00000477243 SCUBE2Q9NQ36 999 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 DMRT3Q9NQL9 472 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ITM2CQ9NQX7 267 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 MBIPQ9NS73 344 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 KRT82Q9NSB4 513 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 ABCF3Q9NUQ8 709 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 MRGBPQ9NV56 204 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 GIMAP2Q9UG22 337 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 SIK3Q9Y2K2 1263 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 TRAF6Q9Y4K3 522 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 PCDHA8Q9Y5H6 950 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 SNX13Q9Y5W8 968 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 TLL2Q9Y6L7 1015 aa3.28□□□□□ -1.88
HMGN4-202ENST00000477243 DENND4BO75064 1496 aaPredicted RBP3.28□□□□□ -1.88
HMGN4-202ENST00000477243 MAP1BP46821 2468 aaKnown RBP3.27□□□□□ -1.89
HMGN4-202ENST00000477243 LOC102724428A0A0B4J2F2 783 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 A0A1W2PPC1 479 aa3.27□□□□□ -1.89
HMGN4-202ENST00000477243 GOLGA6L3A6NEY3 463 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms