RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 OR6J1Q8NGC5 347 aa16.31■□□□□ 0.2
CDK5RAP3-201ENST00000338399 PPTC7Q8NI37 304 aa16.31■□□□□ 0.2
CDK5RAP3-201ENST00000338399 FIZ1Q96SL8 496 aa16.31■□□□□ 0.2
CDK5RAP3-201ENST00000338399 NIFKQ9BYG3 293 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-201ENST00000338399 SMARCAD1Q9H4L7 1026 aa16.31■□□□□ 0.2
CDK5RAP3-201ENST00000338399 IFNKQ9P0W0 207 aa16.31■□□□□ 0.2
CDK5RAP3-201ENST00000338399 PRPF6O94906 941 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP3-201ENST00000338399 KIF20AO95235 890 aa16.3■□□□□ 0.2
CDK5RAP3-201ENST00000338399 SERPINC1P01008 464 aa16.3■□□□□ 0.2
CDK5RAP3-201ENST00000338399 XRCC5P13010 732 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP3-201ENST00000338399 PRKCZQ05513 592 aa16.3■□□□□ 0.2
CDK5RAP3-201ENST00000338399 IRF5Q13568 498 aa16.3■□□□□ 0.2
CDK5RAP3-201ENST00000338399 CDKAL1Q5VV42 579 aa16.3■□□□□ 0.2
CDK5RAP3-201ENST00000338399 FAM178BQ8IXR5 827 aa16.3■□□□□ 0.2
CDK5RAP3-201ENST00000338399 FAM167AQ96KS9 214 aa16.3■□□□□ 0.2
CDK5RAP3-201ENST00000338399 DRC1Q96MC2 740 aa16.3■□□□□ 0.2
CDK5RAP3-201ENST00000338399 SRRTQ9BXP5 876 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP3-201ENST00000338399 PDLIM7Q9NR12 457 aa16.3■□□□□ 0.2
CDK5RAP3-201ENST00000338399 LARSQ9P2J5 1176 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP3-201ENST00000338399 SOX10P56693 466 aa16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 CSGALNACT2Q8N6G5 542 aa16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 BBXQ8WY36 941 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 ATP6V0A4Q9HBG4 840 aa16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 XPNPEP1Q9NQW7 623 aa16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 LGALS2P05162 132 aa16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 PLS3P13797 630 aa16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 POLGP54098 1239 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 PLCB4Q15147 1175 aa16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 TARBP2Q15633 366 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 ZC2HC1CQ53FD0 456 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 ZNF720Q7Z2F6 126 aa16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 MCPH1Q8NEM0 835 aa16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 ZNF507Q8TCN5 953 aa16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 EEF2KMTQ96G04 330 aa16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 CEP89Q96ST8 783 aa16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 TSG101Q99816 390 aa16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 XPO4Q9C0E2 1151 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 GNEQ9Y223 722 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-201ENST00000338399 DYNC1LI2O43237 492 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 HOXD13P35453 343 aa16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 SLC26A2P50443 739 aa16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 PEX3P56589 373 aa16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 UBASH3AP57075 661 aa16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 LRRC63Q05C16 580 aa16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 EMC2Q15006 297 aa16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 CREBRFQ8IUR6 639 aa16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 ATP8B4Q8TF62 1192 aa16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 TRIB2Q92519 343 aa16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 KIFAP3Q92845 792 aa16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 LENG1Q96BZ8 264 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 KCTD10Q9H3F6 313 aa16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 THAP9Q9H5L6 903 aa16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 DHX33Q9H6R0 707 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-201ENST00000338399 K7ENM7 598 aa16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 EIF3DO15371 548 aaKnown RBP eCLIP16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 PPFIA4O75335 1185 aa16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 MMP3P08254 477 aa16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 ZNF286BP0CG31 522 aa16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 KCNA1Q09470 495 aa16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 KNOP1Q1ED39 458 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 BMT2Q1RMZ1 405 aa16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 ZCWPW2Q504Y3 356 aa16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 IRF2BP1Q8IU81 584 aa16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 KSR1Q8IVT5 923 aa16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 CD99L2Q8TCZ2 262 aa16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 NOC3LQ8WTT2 800 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 MRFAP1L1Q96HT8 127 aa16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 NAP1L5Q96NT1 182 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 ERAP1Q9NZ08 941 aa16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 TRPC6Q9Y210 931 aa16.27■□□□□ 0.2
CDK5RAP3-201ENST00000338399 CASP8AP2Q9UKL3 1982 aa16.27■□□□□ 0.19
CDK5RAP3-201ENST00000338399 THSD7BQ9C0I4 1608 aa16.27■□□□□ 0.19
CDK5RAP3-201ENST00000338399 KCNJ18B7U540 433 aa16.27■□□□□ 0.19
CDK5RAP3-201ENST00000338399 KCNJ12Q14500 433 aa16.27■□□□□ 0.19
CDK5RAP3-201ENST00000338399 MFSD14CQ5VZR4 134 aa16.27■□□□□ 0.19
CDK5RAP3-201ENST00000338399 STXBP4Q6ZWJ1 553 aa16.27■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TLK2Q86UE8 772 aa16.27■□□□□ 0.19
CDK5RAP3-201ENST00000338399 SPC24Q8NBT2 197 aa16.27■□□□□ 0.19
CDK5RAP3-201ENST00000338399 SLC7A3Q8WY07 619 aa16.27■□□□□ 0.19
CDK5RAP3-201ENST00000338399 BSNDQ8WZ55 320 aa16.27■□□□□ 0.19
CDK5RAP3-201ENST00000338399 RNPEPQ9H4A4 650 aa16.27■□□□□ 0.19
CDK5RAP3-201ENST00000338399 FAM184BQ9ULE4 1060 aa16.27■□□□□ 0.19
CDK5RAP3-201ENST00000338399 PCDHB13Q9Y5F0 798 aa16.27■□□□□ 0.19
CDK5RAP3-201ENST00000338399 PCNTO95613 3336 aa16.26■□□□□ 0.19
CDK5RAP3-201ENST00000338399 GPR25O00155 361 aa16.26■□□□□ 0.19
CDK5RAP3-201ENST00000338399 MAPTP10636 758 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-201ENST00000338399 RFC5P40937 340 aa16.26■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TCP11X2Q5H9J9 407 aa16.26■□□□□ 0.19
CDK5RAP3-201ENST00000338399 FOXR2Q6PJQ5 311 aa16.26■□□□□ 0.19
CDK5RAP3-201ENST00000338399 DRC7Q8IY82 874 aa16.26■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TRPV1Q8NER1 839 aa16.26■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TMEM143Q96AN5 459 aa16.26■□□□□ 0.19
CDK5RAP3-201ENST00000338399 C16orf70Q9BSU1 422 aa16.26■□□□□ 0.19
CDK5RAP3-201ENST00000338399 STRA6Q9BX79 667 aa16.26■□□□□ 0.19
CDK5RAP3-201ENST00000338399 POLR3FQ9H1D9 316 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-201ENST00000338399 CCDC169A6NNP5 214 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ZBTB42B2RXF5 422 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 SLC16A4O15374 487 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 CBFA2T2O43439 604 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 HBP1O60381 514 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms