RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO1, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO1	YPL232W	NOP58	Q12499	511 aa	Known RBP	4.6	□□□□□ -1.67
SSO1	YPL232W	CAR1	P00812	333 aa	Known RBP	4.59	□□□□□ -1.67
SSO1	YPL232W	RHO2	P06781	192 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	KSS1	P14681	368 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	SAN1	P22470	610 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	NPP1	P25353	742 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	DMC1	P25453	334 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	EHD3	P28817	500 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	ITR1	P30605	584 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	MKS1	P34072	584 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	SCO2	P38072	301 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	YBR220C	P38318	560 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	FAA2	P39518	744 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	SLS1	P42900	643 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	PTR3	P43606	678 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	YFR054C	P43622	192 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	BIT61	P47041	543 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
SSO1	YPL232W	AAD10	P47182	288 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	NAS6	P50086	228 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	PCP1	P53259	346 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	RCF2	P53721	224 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	GOR1	P53839	350 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	YPL039W	Q03080	316 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	YDR124W	Q04608	324 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	COQ11	Q05892	277 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	YDL121C	Q07541	149 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	YDL180W	Q12301	547 aa		4.59	□□□□□ -1.67
SSO1	YPL232W	HSC82	P15108	705 aa	Known RBP	4.58	□□□□□ -1.68
SSO1	YPL232W	DBF2	P22204	572 aa		4.58	□□□□□ -1.68
SSO1	YPL232W	SCO1	P23833	295 aa		4.58	□□□□□ -1.68
SSO1	YPL232W	ITR2	P30606	609 aa		4.58	□□□□□ -1.68
SSO1	YPL232W	CYS4	P32582	507 aa	Known RBP	4.58	□□□□□ -1.68
SSO1	YPL232W	SPC29	P33419	253 aa		4.58	□□□□□ -1.68
SSO1	YPL232W	YKL102C	P34249	101 aa		4.58	□□□□□ -1.68
SSO1	YPL232W	ARB1	P40024	610 aa	Known RBP	4.58	□□□□□ -1.68
SSO1	YPL232W	YER188W	P40103	239 aa		4.58	□□□□□ -1.68
SSO1	YPL232W	YNL208W	P40159	199 aa	Known RBP	4.58	□□□□□ -1.68
SSO1	YPL232W	LYS12	P40495	371 aa	Known RBP	4.58	□□□□□ -1.68
SSO1	YPL232W	SEC26	P41810	973 aa	Known RBP	4.58	□□□□□ -1.68
SSO1	YPL232W	IGO1	P53897	168 aa		4.58	□□□□□ -1.68
SSO1	YPL232W	INP1	Q03694	420 aa		4.58	□□□□□ -1.68
SSO1	YPL232W	RIM13	Q03792	727 aa		4.58	□□□□□ -1.68
SSO1	YPL232W	SNX41	Q04053	625 aa		4.58	□□□□□ -1.68
SSO1	YPL232W	RPN5	Q12250	445 aa	Known RBP	4.58	□□□□□ -1.68
SSO1	YPL232W	ILV2	P07342	687 aa	Known RBP	4.57	□□□□□ -1.68
SSO1	YPL232W	ADH4	P10127	382 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	AAR2	P32357	355 aa	Predicted RBP	4.57	□□□□□ -1.68
SSO1	YPL232W	NGG1	P32494	702 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	SEC17	P32602	292 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	CAF4	P36130	643 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	RIM2	P38127	377 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	OLA1	P38219	394 aa	Known RBP	4.57	□□□□□ -1.68
SSO1	YPL232W	EXO84	P38261	753 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	YHL044W	P38727	235 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	AYR1	P40471	297 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	SMK1	P41808	388 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	MRPS18	P42847	217 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	MRPL19	P53875	158 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	EKI1	Q03764	534 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	YLR053C	Q12026	108 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	NUR1	Q12066	484 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	SET6	Q12529	373 aa		4.57	□□□□□ -1.68
SSO1	YPL232W	RHO1	P06780	209 aa	Known RBP	4.56	□□□□□ -1.68
SSO1	YPL232W	CTR86	P25355	563 aa		4.56	□□□□□ -1.68
SSO1	YPL232W	OSH7	P38755	437 aa		4.56	□□□□□ -1.68
SSO1	YPL232W	SEC31	P38968	1273 aa	Known RBP	4.56	□□□□□ -1.68
SSO1	YPL232W	YJL068C	P40363	299 aa		4.56	□□□□□ -1.68
SSO1	YPL232W	YIL029C	P40538	142 aa		4.56	□□□□□ -1.68
SSO1	YPL232W	YIR020C	P40575	100 aa		4.56	□□□□□ -1.68
SSO1	YPL232W	GTO1	P48239	356 aa		4.56	□□□□□ -1.68
SSO1	YPL232W	RSM28	Q03430	361 aa		4.56	□□□□□ -1.68
SSO1	YPL232W	TY1A-MR1	Q04215	440 aa		4.56	□□□□□ -1.68
SSO1	YPL232W	STE23	Q06010	1027 aa		4.56	□□□□□ -1.68
SSO1	YPL232W	ARR1	Q06596	294 aa		4.56	□□□□□ -1.68
SSO1	YPL232W	RDL2	Q08742	149 aa	Known RBP	4.56	□□□□□ -1.68
SSO1	YPL232W	RDL1	Q12305	139 aa	Known RBP	4.56	□□□□□ -1.68
SSO1	YPL232W	REP1	P03871	373 aa		4.55	□□□□□ -1.68
SSO1	YPL232W	DAL80	P26343	269 aa		4.55	□□□□□ -1.68
SSO1	YPL232W	STE14	P32584	239 aa		4.55	□□□□□ -1.68
SSO1	YPL232W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	RIP-Chip
SSO1	YPL232W	YEL043W	P32618	956 aa		4.55	□□□□□ -1.68
SSO1	YPL232W	LAS1	P36146	502 aa	Predicted RBP	4.55	□□□□□ -1.68
SSO1	YPL232W	MRK1	P50873	501 aa		4.55	□□□□□ -1.68
SSO1	YPL232W	SBH2	P52871	88 aa		4.55	□□□□□ -1.68
SSO1	YPL232W	NOP19	P53317	196 aa	Predicted RBP	4.55	□□□□□ -1.68
SSO1	YPL232W	NAN1	Q02931	896 aa	Known RBP	4.55	□□□□□ -1.68
SSO1	YPL232W	COX20	Q04935	205 aa		4.55	□□□□□ -1.68
SSO1	YPL232W	FRA1	Q07825	749 aa		4.55	□□□□□ -1.68
SSO1	YPL232W	YLR036C	Q07986	203 aa		4.55	□□□□□ -1.68
SSO1	YPL232W	TMA46	Q12000	345 aa	Known RBP	4.55	□□□□□ -1.68
SSO1	YPL232W	TRP3	P00937	484 aa		4.54	□□□□□ -1.68
SSO1	YPL232W	ATP4	P05626	244 aa		4.54	□□□□□ -1.68
SSO1	YPL232W	HEM3	P28789	327 aa		4.54	□□□□□ -1.68
SSO1	YPL232W	TOD6	P34219	525 aa		4.54	□□□□□ -1.68
SSO1	YPL232W	SPP381	P38282	291 aa	Predicted RBP	4.54	□□□□□ -1.68
SSO1	YPL232W	SMX2	P40204	77 aa	Known RBP	4.54	□□□□□ -1.68
SSO1	YPL232W	RFC4	P40339	323 aa	Known RBP	4.54	□□□□□ -1.68
SSO1	YPL232W	VHR1	P40522	640 aa		4.54	□□□□□ -1.68
SSO1	YPL232W	MOB2	P43563	287 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms