RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C RPL10P41805 221 aaKnown RBP3.9□□□□□ -1.79
VHS3YOR054C GLR1P41921 483 aaKnown RBP3.9□□□□□ -1.79
VHS3YOR054C MRX5P47007 382 aa3.9□□□□□ -1.79
VHS3YOR054C MPS3P47069 682 aa3.9□□□□□ -1.79
VHS3YOR054C MNN10P50108 393 aaKnown RBP3.9□□□□□ -1.79
VHS3YOR054C YGR053CP53234 283 aa3.9□□□□□ -1.79
VHS3YOR054C LSM3P57743 89 aaKnown RBP3.9□□□□□ -1.79
VHS3YOR054C ODC1Q03028 310 aa3.9□□□□□ -1.79
VHS3YOR054C RLI1Q03195 608 aaKnown RBP3.9□□□□□ -1.79
VHS3YOR054C YDR131CQ03899 556 aa3.9□□□□□ -1.79
VHS3YOR054C SEN15Q04675 128 aa3.9□□□□□ -1.79
VHS3YOR054C YMR034CQ05131 434 aaPredicted RBP3.9□□□□□ -1.79
VHS3YOR054C DIN7Q12086 430 aa3.9□□□□□ -1.79
VHS3YOR054C REC8Q12188 680 aa3.9□□□□□ -1.79
VHS3YOR054C AGC1Q12482 902 aa3.9□□□□□ -1.79
VHS3YOR054C TMA7Q3E764 64 aaKnown RBP3.9□□□□□ -1.79
VHS3YOR054C VMA9Q3E7B6 73 aa3.9□□□□□ -1.79
VHS3YOR054C SRN2Q99176 213 aa3.9□□□□□ -1.79
VHS3YOR054C MPD2Q99316 277 aa3.9□□□□□ -1.79
VHS3YOR054C SSA3P09435 649 aaKnown RBP3.89□□□□□ -1.79
VHS3YOR054C REV1P12689 985 aa3.89□□□□□ -1.79
VHS3YOR054C MDH1P17505 334 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
VHS3YOR054C GRR1P24814 1151 aa3.89□□□□□ -1.79
VHS3YOR054C YCL002CP25565 263 aa3.89□□□□□ -1.79
VHS3YOR054C DAL80P26343 269 aa3.89□□□□□ -1.79
VHS3YOR054C FAA1P30624 700 aaKnown RBP3.89□□□□□ -1.79
VHS3YOR054C RIM1P32445 135 aaKnown RBP3.89□□□□□ -1.79
VHS3YOR054C BEM3P32873 1128 aa3.89□□□□□ -1.79
VHS3YOR054C TAT1P38085 619 aa3.89□□□□□ -1.79
VHS3YOR054C FAA3P39002 694 aa3.89□□□□□ -1.79
VHS3YOR054C IDP2P41939 412 aa3.89□□□□□ -1.79
VHS3YOR054C CAK1P43568 368 aaPredicted RBP3.89□□□□□ -1.79
VHS3YOR054C NBP35P52920 328 aa3.89□□□□□ -1.79
VHS3YOR054C PKP2P53170 491 aa3.89□□□□□ -1.79
VHS3YOR054C YNL181WP53878 407 aa3.89□□□□□ -1.79
VHS3YOR054C IDP3P53982 420 aaKnown RBP3.89□□□□□ -1.79
VHS3YOR054C RRN5Q02983 363 aa3.89□□□□□ -1.79
VHS3YOR054C YMD8Q03697 442 aa3.89□□□□□ -1.79
VHS3YOR054C DUS4Q06063 367 aa3.89□□□□□ -1.79
VHS3YOR054C YDL199CQ12407 687 aa3.89□□□□□ -1.79
VHS3YOR054C YGR161W-CQ3E744 92 aa3.89□□□□□ -1.79
VHS3YOR054C MHF2Q3E829 80 aa3.89□□□□□ -1.79
VHS3YOR054C PMA1P05030 918 aaKnown RBP3.88□□□□□ -1.79
VHS3YOR054C ARG80P07249 177 aa3.88□□□□□ -1.79
VHS3YOR054C TRP4P07285 380 aaPredicted RBP3.88□□□□□ -1.79
VHS3YOR054C FUM1P08417 488 aaKnown RBP3.88□□□□□ -1.79
VHS3YOR054C YER152CP10356 443 aa3.88□□□□□ -1.79
VHS3YOR054C YPK2P18961 677 aa3.88□□□□□ -1.79
VHS3YOR054C PRP2P20095 876 aaPredicted RBP3.88□□□□□ -1.79
VHS3YOR054C UTR1P21373 530 aa3.88□□□□□ -1.79
VHS3YOR054C YCK2P23292 546 aaKnown RBP3.88□□□□□ -1.79
VHS3YOR054C MIR1P23641 311 aaKnown RBP3.88□□□□□ -1.79
VHS3YOR054C RSA4P25382 515 aaKnown RBP3.88□□□□□ -1.79
VHS3YOR054C POF1P25576 258 aa3.88□□□□□ -1.79
VHS3YOR054C BUB3P26449 341 aa3.88□□□□□ -1.79
VHS3YOR054C IDH1P28834 360 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
VHS3YOR054C MRPL9P31334 269 aa3.88□□□□□ -1.79
VHS3YOR054C CAT2P32796 670 aaKnown RBP3.88□□□□□ -1.79
VHS3YOR054C MRPL15P36523 253 aa3.88□□□□□ -1.79
VHS3YOR054C POL12P38121 705 aaPredicted RBP3.88□□□□□ -1.79
VHS3YOR054C YBR013CP38215 129 aa3.88□□□□□ -1.79
VHS3YOR054C VPS45P38932 577 aa3.88□□□□□ -1.79
VHS3YOR054C LAS21P40367 830 aa3.88□□□□□ -1.79
VHS3YOR054C PAN6P40459 309 aa3.88□□□□□ -1.79
VHS3YOR054C ATG18P43601 500 aa3.88□□□□□ -1.79
VHS3YOR054C PMT4P46971 762 aa3.88□□□□□ -1.79
VHS3YOR054C FAA4P47912 694 aaKnown RBP3.88□□□□□ -1.79
VHS3YOR054C GTO1P48239 356 aa3.88□□□□□ -1.79
VHS3YOR054C STR3P53101 465 aaKnown RBP3.88□□□□□ -1.79
VHS3YOR054C YGL159WP53110 370 aa3.88□□□□□ -1.79
VHS3YOR054C MPC1P53157 130 aaKnown RBP3.88□□□□□ -1.79
VHS3YOR054C PUS2P53167 370 aa3.88□□□□□ -1.79
VHS3YOR054C GIM3P53900 129 aa3.88□□□□□ -1.79
VHS3YOR054C PRP38Q00723 242 aaPredicted RBP3.88□□□□□ -1.79
VHS3YOR054C CWC27Q02770 301 aa3.88□□□□□ -1.79
VHS3YOR054C SNO1Q03144 224 aa3.88□□□□□ -1.79
VHS3YOR054C MRPS17Q03246 237 aaPredicted RBP3.88□□□□□ -1.79
VHS3YOR054C GAS3Q03655 524 aa3.88□□□□□ -1.79
VHS3YOR054C LRS4Q04087 347 aaKnown RBP3.88□□□□□ -1.79
VHS3YOR054C HOF1Q05080 669 aa3.88□□□□□ -1.79
VHS3YOR054C CDC123Q05791 360 aa3.88□□□□□ -1.79
VHS3YOR054C YLR173WQ06247 608 aa3.88□□□□□ -1.79
VHS3YOR054C PML1Q07930 204 aaPredicted RBP3.88□□□□□ -1.79
VHS3YOR054C YOL131WQ08270 108 aa3.88□□□□□ -1.79
VHS3YOR054C YLL056CQ12177 298 aa3.88□□□□□ -1.79
VHS3YOR054C YPL066WQ12194 479 aa3.88□□□□□ -1.79
VHS3YOR054C WTM2Q12206 467 aa3.88□□□□□ -1.79
VHS3YOR054C YLR046CQ12253 270 aa3.88□□□□□ -1.79
VHS3YOR054C ERG27Q12452 347 aaKnown RBP3.88□□□□□ -1.79
VHS3YOR054C YPR014CQ6B0W2 109 aa3.88□□□□□ -1.79
VHS3YOR054C Q0142Q9ZZW4 58 aa3.88□□□□□ -1.79
VHS3YOR054C GAL80P04387 435 aa3.88□□□□□ -1.79
VHS3YOR054C RPL8AP17076 256 aaKnown RBP3.88□□□□□ -1.79
VHS3YOR054C VMA3P25515 160 aa3.88□□□□□ -1.79
VHS3YOR054C EMC1P25574 760 aa3.88□□□□□ -1.79
VHS3YOR054C GAC1P28006 793 aa3.88□□□□□ -1.79
VHS3YOR054C DAL3P32459 195 aa3.88□□□□□ -1.79
VHS3YOR054C CDC5P32562 705 aa3.88□□□□□ -1.79
VHS3YOR054C SUR1P33300 382 aa3.88□□□□□ -1.79
VHS3YOR054C YKL162CP36052 402 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms