RNA–Protein interactions for RNA: YOR042W

CUE5, Transcript of Ubiquitin-binding protein, yeast

Gene CUE5, Length 1,236 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE5	YOR042W	VPS33	P20795	691 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	MGR1	P25573	417 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	SPB1	P25582	841 aa	Predicted RBP	4.61	□□□□□ -1.67
CUE5	YOR042W	TAH1	P25638	111 aa	Predicted RBP	4.61	□□□□□ -1.67
CUE5	YOR042W	NTH1	P32356	751 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	PDX3	P38075	228 aa	Known RBP	4.61	□□□□□ -1.67
CUE5	YOR042W	MTW1	P39731	289 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	CFD1	P40558	293 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	YIL001W	P40560	513 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	YJL163C	P46996	555 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	HOC1	P47124	396 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	KEL2	P50090	882 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	COX18	P53239	316 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	HMO1	Q03973	246 aa	Known RBP	4.61	□□□□□ -1.67
CUE5	YOR042W	SSQ1	Q05931	657 aa	Predicted RBP	4.61	□□□□□ -1.67
CUE5	YOR042W	DIC1	Q06143	298 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	YLR456W	Q06199	204 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	COS7	Q07788	383 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	YLR036C	Q07986	203 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	BSC6	Q08280	497 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	MMT2	Q08970	484 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	ULA1	Q12059	462 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	YDR061W	Q12298	539 aa		4.61	□□□□□ -1.67
CUE5	YOR042W	COR1	P07256	457 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	BCY1	P07278	416 aa	Known RBP	4.6	□□□□□ -1.67
CUE5	YOR042W	YCR006C	P25350	157 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	NUP2	P32499	720 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	HIS7	P33734	552 aa	Known RBP	4.6	□□□□□ -1.67
CUE5	YOR042W	DOA1	P36037	715 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	SKG1	P36169	355 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	YHR218W	P38899	603 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	MNN9	P39107	395 aa	Known RBP	4.6	□□□□□ -1.67
CUE5	YOR042W	FAA2	P39518	744 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	ECM10	P39987	644 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	LAS21	P40367	830 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	RPL10	P41805	221 aa	Known RBP	4.6	□□□□□ -1.67
CUE5	YOR042W	BAP3	P41815	604 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	IBA57	P47158	497 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	MTL1	P53214	551 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	COS6	P53344	381 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	SED5	Q01590	340 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	RQC1	Q05468	723 aa	Known RBP	4.6	□□□□□ -1.67
CUE5	YOR042W	PNS1	Q12412	539 aa		4.6	□□□□□ -1.67
CUE5	YOR042W	GAL4	P04386	881 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	RAD7	P06779	565 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	RPL40A	P0CH08	128 aa	Known RBP	4.59	□□□□□ -1.67
CUE5	YOR042W	RPL40B	P0CH09	128 aa	Known RBP	4.59	□□□□□ -1.67
CUE5	YOR042W	YAK1	P14680	807 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	CBS2	P14905	389 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	IMG1	P25626	169 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	PEX3	P28795	441 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	UGP1	P32861	499 aa	Known RBP	4.59	□□□□□ -1.67
CUE5	YOR042W	TOR1	P35169	2470 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	TAF14	P35189	244 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	SCO2	P38072	301 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	MED8	P38304	223 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	RCK1	P38622	512 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	CHS7	P38843	316 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	AIM2	P39721	246 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	ALK1	P43633	760 aa	Known RBP	4.59	□□□□□ -1.67
CUE5	YOR042W	FMP33	P46998	180 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	YGR016W	P53209	190 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	YNR068C	P53754	272 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	YNL095C	P53932	642 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	RHO4	Q00246	291 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	YMR210W	Q03649	449 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	ARR1	Q06596	294 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	MFG1	Q07684	458 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	TEN1	Q07921	160 aa		4.59	□□□□□ -1.67
CUE5	YOR042W	GAL3	P13045	520 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	DAL82	P21705	255 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	CMK2	P22517	447 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	CHA1	P25379	360 aa	Known RBP	4.58	□□□□□ -1.68
CUE5	YOR042W	YCL049C	P25577	312 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	YMC1	P32331	307 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	OAR1	P35731	278 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	MRPL15	P36523	253 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	YBR241C	P38142	488 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	YHR177W	P38867	453 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	PRP39	P39682	629 aa	Known RBP	4.58	□□□□□ -1.68
CUE5	YOR042W	YEL020C	P39994	560 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	FAU1	P40099	211 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	RIC1	P40395	1056 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	LYS12	P40495	371 aa	Known RBP	4.58	□□□□□ -1.68
CUE5	YOR042W	YIL086C	P40503	102 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	ARF3	P40994	183 aa	RIP-Chip data	4.58	□□□□□ -1.68	not detected
CUE5	YOR042W	STE24	P47154	453 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	PAC10	P48363	199 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	TOM22	P49334	152 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	UBC11	P52492	156 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	RMR1	P53060	241 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	CDH1	P53197	566 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	SLI1	P53304	468 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	DSL1	P53847	754 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	CSL4	P53859	292 aa	Predicted RBP	4.58	□□□□□ -1.68
CUE5	YOR042W	IGO1	P53897	168 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	ERG13	P54839	491 aa	Known RBP	4.58	□□□□□ -1.68
CUE5	YOR042W	YAT1	P80235	687 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	OAZ1	Q02803	292 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	PEX12	Q04370	399 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 57 ms