RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C TUL1P36096 758 aa8.98□□□□□ -0.97
SPT20YOL148C PGD1P40356 397 aa8.98□□□□□ -0.97
SPT20YOL148C LOH1P47055 219 aa8.98□□□□□ -0.97
SPT20YOL148C VOA1P53262 265 aa8.98□□□□□ -0.97
SPT20YOL148C VID22Q05934 901 aa8.98□□□□□ -0.97
SPT20YOL148C HBT1Q07653 1046 aaKnown RBP8.98□□□□□ -0.97
SPT20YOL148C YCL012CQ8J0M4 134 aa8.98□□□□□ -0.97
SPT20YOL148C DFG16Q99234 619 aa8.98□□□□□ -0.97
SPT20YOL148C SLH1P53327 1967 aaKnown RBP8.98□□□□□ -0.97
SPT20YOL148C PRP2P20095 876 aaPredicted RBP8.97□□□□□ -0.97
SPT20YOL148C VMA5P31412 392 aaKnown RBP8.97□□□□□ -0.97
SPT20YOL148C ATP11P32453 318 aa8.97□□□□□ -0.97
SPT20YOL148C VPH1P32563 840 aaKnown RBP8.97□□□□□ -0.97
SPT20YOL148C LOT5P34234 306 aa8.97□□□□□ -0.97
SPT20YOL148C SHE2P36068 246 aaKnown RBP RIP-Chip data8.97□□□□□ -0.97not detected
SPT20YOL148C HRB1P38922 454 aaKnown RBP RIP-Chip data8.97□□□□□ -0.97not detected
SPT20YOL148C RAD55P38953 406 aa8.97□□□□□ -0.97
SPT20YOL148C FET4P40988 552 aa8.97□□□□□ -0.97
SPT20YOL148C YGR201CP42936 225 aa8.97□□□□□ -0.97
SPT20YOL148C GOR1P53839 350 aa8.97□□□□□ -0.97
SPT20YOL148C AAT1Q01802 451 aa8.97□□□□□ -0.97
SPT20YOL148C YSA1Q01976 231 aa8.97□□□□□ -0.97
SPT20YOL148C VBA1Q04301 562 aa8.97□□□□□ -0.97
SPT20YOL148C UTP21Q06078 939 aaPredicted RBP8.97□□□□□ -0.97
SPT20YOL148C NUT2Q06213 157 aa8.97□□□□□ -0.97
SPT20YOL148C YPR084WQ06821 456 aa8.97□□□□□ -0.97
SPT20YOL148C YPR063CQ12160 140 aa8.97□□□□□ -0.97
SPT20YOL148C TY1A-NL1Q12391 440 aaKnown RBP8.97□□□□□ -0.97
SPT20YOL148C RDI1Q12434 202 aa8.97□□□□□ -0.97
SPT20YOL148C ARG80P07249 177 aa8.96□□□□□ -0.97
SPT20YOL148C RPS18AP0CX55 146 aaKnown RBP8.96□□□□□ -0.97
SPT20YOL148C RPS18BP0CX56 146 aaPredicted RBP8.96□□□□□ -0.97
SPT20YOL148C PET9P18239 318 aaKnown RBP8.96□□□□□ -0.97
SPT20YOL148C HOP1P20050 605 aa8.96□□□□□ -0.97
SPT20YOL148C AHC2P25649 128 aa8.96□□□□□ -0.97
SPT20YOL148C CYS3P31373 394 aaKnown RBP8.96□□□□□ -0.97
SPT20YOL148C MCM10P32354 571 aa8.96□□□□□ -0.97
SPT20YOL148C SHM2P37291 469 aaKnown RBP8.96□□□□□ -0.97
SPT20YOL148C RTC2P38279 296 aa8.96□□□□□ -0.97
SPT20YOL148C MEP1P40260 492 aa8.96□□□□□ -0.97
SPT20YOL148C YIL024CP40543 189 aa8.96□□□□□ -0.97
SPT20YOL148C MAD2P40958 196 aa8.96□□□□□ -0.97
SPT20YOL148C CIN1P40987 1014 aa8.96□□□□□ -0.97
SPT20YOL148C MCM22P47167 239 aa8.96□□□□□ -0.97
SPT20YOL148C VPS73P53142 486 aaKnown RBP8.96□□□□□ -0.97
SPT20YOL148C GIP3Q03016 1276 aa8.96□□□□□ -0.97
SPT20YOL148C DCR2Q05924 578 aa8.96□□□□□ -0.97
SPT20YOL148C PLB3Q08108 686 aa8.96□□□□□ -0.97
SPT20YOL148C YLR149CQ99296 730 aa8.96□□□□□ -0.97
SPT20YOL148C SWI5P08153 709 aa8.96□□□□□ -0.98
SPT20YOL148C STE12P13574 688 aa8.96□□□□□ -0.98
SPT20YOL148C CDC23P16522 626 aa8.96□□□□□ -0.98
SPT20YOL148C DCC1P25559 380 aa8.96□□□□□ -0.98
SPT20YOL148C YCR061WP25639 631 aa8.96□□□□□ -0.98
SPT20YOL148C SUR1P33300 382 aa8.96□□□□□ -0.98
SPT20YOL148C SFC1P33303 322 aa8.96□□□□□ -0.98
SPT20YOL148C GPT2P36148 743 aa8.96□□□□□ -0.98
SPT20YOL148C PRS2P38620 318 aaKnown RBP8.96□□□□□ -0.98
SPT20YOL148C UTP25P40498 721 aaKnown RBP8.96□□□□□ -0.98
SPT20YOL148C RPE1P46969 238 aa8.96□□□□□ -0.98
SPT20YOL148C AIM14P53109 570 aa8.96□□□□□ -0.98
SPT20YOL148C ODC1Q03028 310 aa8.96□□□□□ -0.98
SPT20YOL148C MDM30Q05930 598 aa8.96□□□□□ -0.98
SPT20YOL148C YLR040CQ07988 224 aa8.96□□□□□ -0.98
SPT20YOL148C DCN1Q12395 269 aa8.96□□□□□ -0.98
SPT20YOL148C CSR2Q12734 1121 aa8.96□□□□□ -0.98
SPT20YOL148C PRE7P23724 241 aaKnown RBP8.95□□□□□ -0.98
SPT20YOL148C YCP4P25349 247 aaKnown RBP8.95□□□□□ -0.98
SPT20YOL148C CDC12P32468 407 aaKnown RBP8.95□□□□□ -0.98
SPT20YOL148C SPO23P33757 523 aa8.95□□□□□ -0.98
SPT20YOL148C THI80P35202 319 aa8.95□□□□□ -0.98
SPT20YOL148C SHE1P38200 338 aa8.95□□□□□ -0.98
SPT20YOL148C LDB7P38210 180 aa8.95□□□□□ -0.98
SPT20YOL148C CCZ1P38273 704 aa8.95□□□□□ -0.98
SPT20YOL148C URA8P38627 578 aaPredicted RBP8.95□□□□□ -0.98
SPT20YOL148C TAD2P47058 250 aa8.95□□□□□ -0.98
SPT20YOL148C YCL001W-AP87012 153 aa8.95□□□□□ -0.98
SPT20YOL148C TPS1Q00764 495 aaKnown RBP8.95□□□□□ -0.98
SPT20YOL148C GSF2Q04697 403 aaKnown RBP8.95□□□□□ -0.98
SPT20YOL148C YPL245WQ12179 454 aaKnown RBP8.95□□□□□ -0.98
SPT20YOL148C BMT6Q12291 365 aa8.95□□□□□ -0.98
SPT20YOL148C YDR461C-AQ2V2P7 80 aa8.95□□□□□ -0.98
SPT20YOL148C TY1A-DR4O74302 440 aa8.94□□□□□ -0.98
SPT20YOL148C TY1A-AP0CX57 440 aa8.94□□□□□ -0.98
SPT20YOL148C TY1A-PR1P0CX58 440 aa8.94□□□□□ -0.98
SPT20YOL148C TY1A-ORP0CX59 440 aa8.94□□□□□ -0.98
SPT20YOL148C TY1A-PR2P0CX60 440 aa8.94□□□□□ -0.98
SPT20YOL148C TY1A-DR5P0CX65 440 aa8.94□□□□□ -0.98
SPT20YOL148C TY1A-ER2P0CX66 440 aa8.94□□□□□ -0.98
SPT20YOL148C TY1A-GR3P0CX67 440 aa8.94□□□□□ -0.98
SPT20YOL148C TY1A-LR1P0CX68 440 aa8.94□□□□□ -0.98
SPT20YOL148C TY1A-MR2P0CX69 440 aa8.94□□□□□ -0.98
SPT20YOL148C ZWF1P11412 505 aaKnown RBP8.94□□□□□ -0.98
SPT20YOL148C AAC3P18238 307 aa8.94□□□□□ -0.98
SPT20YOL148C ERV15P38312 142 aa8.94□□□□□ -0.98
SPT20YOL148C UBX7P38349 436 aa8.94□□□□□ -0.98
SPT20YOL148C PRS3P38689 320 aaKnown RBP8.94□□□□□ -0.98
SPT20YOL148C HTD2P38790 280 aaKnown RBP8.94□□□□□ -0.98
SPT20YOL148C QRI1P43123 477 aaKnown RBP8.94□□□□□ -0.98
SPT20YOL148C YJL043WP47053 257 aa8.94□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms