RNA–Protein interactions for RNA: YOL133W

HRT1, Transcript of RING-H2 domain core subunit of multiple ubiquitin ligase complexes, yeast

Gene HRT1, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT1	YOL133W	RPL6B	P05739	176 aa	Known RBP	3.91	□□□□□ -1.78
HRT1	YOL133W	VAM7	P32912	316 aa		3.91	□□□□□ -1.78
HRT1	YOL133W	SPO23	P33757	523 aa		3.91	□□□□□ -1.78
HRT1	YOL133W	LAS1	P36146	502 aa	Predicted RBP	3.91	□□□□□ -1.78
HRT1	YOL133W	SIF2	P38262	535 aa		3.91	□□□□□ -1.78
HRT1	YOL133W	ALD5	P40047	520 aa	Known RBP	3.91	□□□□□ -1.78
HRT1	YOL133W	YFR057W	P43625	151 aa		3.91	□□□□□ -1.78
HRT1	YOL133W	CTK3	P46963	296 aa	Predicted RBP	3.91	□□□□□ -1.78
HRT1	YOL133W	PGU1	P47180	361 aa		3.91	□□□□□ -1.78
HRT1	YOL133W	CLD1	P53264	445 aa		3.91	□□□□□ -1.78
HRT1	YOL133W	RPL6A	Q02326	176 aa	Known RBP	3.91	□□□□□ -1.78
HRT1	YOL133W	ADA2	Q02336	434 aa		3.91	□□□□□ -1.78
HRT1	YOL133W	YHC1	Q05900	231 aa	Known RBP	3.91	□□□□□ -1.78
HRT1	YOL133W	DBP9	Q06218	594 aa	Known RBP	3.91	□□□□□ -1.78
HRT1	YOL133W	FCY22	Q12119	530 aa		3.91	□□□□□ -1.78
HRT1	YOL133W	YDR061W	Q12298	539 aa		3.91	□□□□□ -1.78
HRT1	YOL133W	RDS1	P25611	832 aa		3.9	□□□□□ -1.79
HRT1	YOL133W	RAD5	P32849	1169 aa	Predicted RBP	3.9	□□□□□ -1.79
HRT1	YOL133W	GDT1	P38301	280 aa	Predicted RBP	3.9	□□□□□ -1.79
HRT1	YOL133W	OXA1	P39952	402 aa		3.9	□□□□□ -1.79
HRT1	YOL133W	YER186C	P40101	306 aa		3.9	□□□□□ -1.79
HRT1	YOL133W	MAM33	P40513	266 aa		3.9	□□□□□ -1.79
HRT1	YOL133W	HAC1	P41546	238 aa		3.9	□□□□□ -1.79
HRT1	YOL133W	CIN2	P46670	268 aa		3.9	□□□□□ -1.79
HRT1	YOL133W	EFM3	P47163	339 aa		3.9	□□□□□ -1.79
HRT1	YOL133W	YET2	Q04210	160 aa		3.9	□□□□□ -1.79
HRT1	YOL133W	YOR012W	Q12351	137 aa		3.9	□□□□□ -1.79
HRT1	YOL133W	NAG1	Q8TGN9	163 aa		3.9	□□□□□ -1.79
HRT1	YOL133W	MAS2	P11914	482 aa		3.89	□□□□□ -1.79
HRT1	YOL133W	TPM1	P17536	199 aa	Known RBP	3.89	□□□□□ -1.79
HRT1	YOL133W	AAT2	P23542	418 aa	Known RBP	3.89	□□□□□ -1.79
HRT1	YOL133W	DBR1	P24309	405 aa	Known RBP	3.89	□□□□□ -1.79
HRT1	YOL133W	GRR1	P24814	1151 aa		3.89	□□□□□ -1.79
HRT1	YOL133W	SPT10	P35208	640 aa		3.89	□□□□□ -1.79
HRT1	YOL133W	OM14	P38325	134 aa		3.89	□□□□□ -1.79
HRT1	YOL133W	HEM14	P40012	539 aa		3.89	□□□□□ -1.79
HRT1	YOL133W	NAS2	P40555	220 aa		3.89	□□□□□ -1.79
HRT1	YOL133W	YNL143C	P53908	130 aa		3.89	□□□□□ -1.79
HRT1	YOL133W	SKI8	Q02793	397 aa	Predicted RBP	3.89	□□□□□ -1.79
HRT1	YOL133W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
HRT1	YOL133W	FAR1	P21268	830 aa		3.88	□□□□□ -1.79
HRT1	YOL133W	PRR1	P28708	518 aa		3.88	□□□□□ -1.79
HRT1	YOL133W	VPH1	P32563	840 aa	Known RBP	3.88	□□□□□ -1.79
HRT1	YOL133W	SEC27	P41811	889 aa	Known RBP	3.88	□□□□□ -1.79
HRT1	YOL133W	YGR016W	P53209	190 aa		3.88	□□□□□ -1.79
HRT1	YOL133W	MEX67	Q99257	599 aa	Known RBP	3.88	□□□□□ -1.79
HRT1	YOL133W	PCL1	P24867	279 aa		3.87	□□□□□ -1.79
HRT1	YOL133W	PHO84	P25297	587 aa	Known RBP	3.87	□□□□□ -1.79
HRT1	YOL133W	MSK1	P32048	576 aa		3.87	□□□□□ -1.79
HRT1	YOL133W	TRM112	P53738	135 aa	Predicted RBP	3.87	□□□□□ -1.79
HRT1	YOL133W	AIM33	Q04516	312 aa		3.87	□□□□□ -1.79
HRT1	YOL133W	PRS1	P32895	427 aa	Known RBP	3.86	□□□□□ -1.79
HRT1	YOL133W	YHR122W	P38829	231 aa		3.86	□□□□□ -1.79
HRT1	YOL133W	LYS12	P40495	371 aa	Known RBP	3.86	□□□□□ -1.79
HRT1	YOL133W	MPS2	P53159	387 aa		3.86	□□□□□ -1.79
HRT1	YOL133W	PML1	Q07930	204 aa	Predicted RBP	3.86	□□□□□ -1.79
HRT1	YOL133W	PEX27	Q08580	376 aa		3.86	□□□□□ -1.79
HRT1	YOL133W	PSY3	Q12318	242 aa		3.86	□□□□□ -1.79
HRT1	YOL133W	PCL9	Q12477	304 aa		3.86	□□□□□ -1.79
HRT1	YOL133W	YOR338W	Q99326	363 aa		3.86	□□□□□ -1.79
HRT1	YOL133W	SAG1	P20840	650 aa		3.85	□□□□□ -1.79
HRT1	YOL133W	MRPL8	P22353	238 aa		3.85	□□□□□ -1.79
HRT1	YOL133W	ZUO1	P32527	433 aa	Known RBP	3.85	□□□□□ -1.79
HRT1	YOL133W	PTK1	P36002	662 aa	Predicted RBP	3.85	□□□□□ -1.79
HRT1	YOL133W	UTH1	P36135	365 aa		3.85	□□□□□ -1.79
HRT1	YOL133W	SEH1	P53011	349 aa	Known RBP	3.85	□□□□□ -1.79
HRT1	YOL133W	HAL1	Q01766	294 aa		3.85	□□□□□ -1.79
HRT1	YOL133W	YDR286C	Q05530	114 aa		3.85	□□□□□ -1.79
HRT1	YOL133W	YLH47	Q06493	454 aa		3.85	□□□□□ -1.79
HRT1	YOL133W	BSC6	Q08280	497 aa		3.85	□□□□□ -1.79
HRT1	YOL133W	PGC1	Q08959	321 aa		3.85	□□□□□ -1.79
HRT1	YOL133W	DET1	Q99288	334 aa	Known RBP	3.85	□□□□□ -1.79
HRT1	YOL133W	PRB1	P09232	635 aa		3.84	□□□□□ -1.79
HRT1	YOL133W	THR4	P16120	514 aa	Known RBP	3.84	□□□□□ -1.79
HRT1	YOL133W	CDC50	P25656	391 aa		3.84	□□□□□ -1.79
HRT1	YOL133W	EFB1	P32471	206 aa	Known RBP	3.84	□□□□□ -1.79
HRT1	YOL133W	YEL043W	P32618	956 aa		3.84	□□□□□ -1.79
HRT1	YOL133W	ANP1	P32629	500 aa		3.84	□□□□□ -1.79
HRT1	YOL133W	UIP5	P36137	443 aa		3.84	□□□□□ -1.79
HRT1	YOL133W	CAJ1	P39101	391 aa		3.84	□□□□□ -1.79
HRT1	YOL133W	TIM17	P39515	158 aa		3.84	□□□□□ -1.79
HRT1	YOL133W	RPA34	P47006	233 aa	Predicted RBP	3.84	□□□□□ -1.79
HRT1	YOL133W	PDR16	P53860	351 aa	Known RBP	3.84	□□□□□ -1.79
HRT1	YOL133W	VAC7	P53950	1165 aa		3.84	□□□□□ -1.79
HRT1	YOL133W	SLM3	Q12093	417 aa		3.84	□□□□□ -1.79
HRT1	YOL133W	FSH3	Q99369	266 aa		3.84	□□□□□ -1.79
HRT1	YOL133W	STE3	P06783	470 aa		3.83	□□□□□ -1.8
HRT1	YOL133W	RPS18A	P0CX55	146 aa	Known RBP	3.83	□□□□□ -1.8
HRT1	YOL133W	RPS18B	P0CX56	146 aa	Predicted RBP	3.83	□□□□□ -1.8
HRT1	YOL133W	ECM8	P38246	354 aa		3.83	□□□□□ -1.8
HRT1	YOL133W	LSM12	P38828	187 aa	Known RBP	3.83	□□□□□ -1.8
HRT1	YOL133W	YNL208W	P40159	199 aa	Known RBP	3.83	□□□□□ -1.8
HRT1	YOL133W	FYV8	P46949	817 aa	Known RBP	3.83	□□□□□ -1.8
HRT1	YOL133W	REX2	P54964	269 aa	Known RBP	3.83	□□□□□ -1.8
HRT1	YOL133W	DNL4	Q08387	944 aa	Predicted RBP	3.83	□□□□□ -1.8
HRT1	YOL133W	ZRC1	P20107	442 aa		3.82	□□□□□ -1.8
HRT1	YOL133W	GIT1	P25346	518 aa		3.82	□□□□□ -1.8
HRT1	YOL133W	SSE1	P32589	693 aa	Known RBP	3.82	□□□□□ -1.8
HRT1	YOL133W	YBL028C	P38202	106 aa		3.82	□□□□□ -1.8
HRT1	YOL133W	ATG7	P38862	630 aa		3.82	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms