RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	BAR1	P12630	587 aa		2.56	□□□□□ -2
SKP2	YNL311C	UNG1	P12887	359 aa		2.56	□□□□□ -2
SKP2	YNL311C	MRPL33	P20084	86 aa		2.56	□□□□□ -2
SKP2	YNL311C	DMC1	P25453	334 aa		2.56	□□□□□ -2
SKP2	YNL311C	SEC65	P29478	273 aa		2.56	□□□□□ -2
SKP2	YNL311C	BMT2	P38278	337 aa		2.56	□□□□□ -2
SKP2	YNL311C	YHR219W	P38900	624 aa		2.56	□□□□□ -2
SKP2	YNL311C	AGE2	P40529	298 aa		2.56	□□□□□ -2
SKP2	YNL311C	MAD3	P47074	515 aa		2.56	□□□□□ -2
SKP2	YNL311C	PEF1	P53238	335 aa		2.56	□□□□□ -2
SKP2	YNL311C	MUM3	Q08750	479 aa		2.56	□□□□□ -2
SKP2	YNL311C	RPS23A	P0CX29	145 aa	Known RBP	2.55	□□□□□ -2
SKP2	YNL311C	RPS23B	P0CX30	145 aa		2.55	□□□□□ -2
SKP2	YNL311C	KGD1	P20967	1014 aa	Known RBP	2.55	□□□□□ -2
SKP2	YNL311C	VMA3	P25515	160 aa		2.55	□□□□□ -2
SKP2	YNL311C	KAR4	P25583	335 aa		2.55	□□□□□ -2
SKP2	YNL311C	YOR062C	P36025	268 aa		2.55	□□□□□ -2
SKP2	YNL311C	NSG1	P38837	291 aa		2.55	□□□□□ -2
SKP2	YNL311C	PSD1	P39006	500 aa		2.55	□□□□□ -2
SKP2	YNL311C	END3	P39013	349 aa		2.55	□□□□□ -2
SKP2	YNL311C	AAD10	P47182	288 aa		2.55	□□□□□ -2
SKP2	YNL311C	IMA1	P53051	589 aa		2.55	□□□□□ -2
SKP2	YNL311C	LSC1	P53598	329 aa	Known RBP	2.55	□□□□□ -2
SKP2	YNL311C	YNL140C	P53910	189 aa		2.55	□□□□□ -2
SKP2	YNL311C	SSL2	Q00578	843 aa		2.55	□□□□□ -2
SKP2	YNL311C	RNY1	Q02933	434 aa	Known RBP	2.55	□□□□□ -2
SKP2	YNL311C	YPL109C	Q02981	657 aa		2.55	□□□□□ -2
SKP2	YNL311C	VPS60	Q03390	229 aa		2.55	□□□□□ -2
SKP2	YNL311C	YDR278C	Q05612	105 aa		2.55	□□□□□ -2
SKP2	YNL311C	TMA10	Q06177	86 aa		2.55	□□□□□ -2
SKP2	YNL311C	IPK1	Q06667	281 aa		2.55	□□□□□ -2
SKP2	YNL311C	PET123	P17558	318 aa		2.54	□□□□□ -2
SKP2	YNL311C	MCK1	P21965	375 aa	Known RBP	2.54	□□□□□ -2
SKP2	YNL311C	MIG1	P27705	504 aa		2.54	□□□□□ -2
SKP2	YNL311C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.54	□□□□□ -2	not detected
SKP2	YNL311C	PPG1	P32838	368 aa		2.54	□□□□□ -2
SKP2	YNL311C	LOS1	P33418	1100 aa	Predicted RBP	2.54	□□□□□ -2
SKP2	YNL311C	CHK1	P38147	527 aa		2.54	□□□□□ -2
SKP2	YNL311C	TFG2	P41896	400 aa	Predicted RBP	2.54	□□□□□ -2
SKP2	YNL311C	DPB11	P47027	764 aa	Predicted RBP	2.54	□□□□□ -2
SKP2	YNL311C	ELA1	P53861	379 aa	Predicted RBP	2.54	□□□□□ -2
SKP2	YNL311C	RCE1	Q03530	315 aa		2.54	□□□□□ -2
SKP2	YNL311C	SNA4	Q07549	140 aa		2.54	□□□□□ -2
SKP2	YNL311C	SPT3	P06844	337 aa		2.54	□□□□□ -2
SKP2	YNL311C	ADE5,7	P07244	802 aa	Known RBP	2.54	□□□□□ -2
SKP2	YNL311C	ERG11	P10614	530 aa		2.54	□□□□□ -2
SKP2	YNL311C	PHO81	P17442	1178 aa		2.54	□□□□□ -2
SKP2	YNL311C	HEM3	P28789	327 aa		2.54	□□□□□ -2
SKP2	YNL311C	SET5	P38890	526 aa	Known RBP	2.54	□□□□□ -2
SKP2	YNL311C	LCP5	P40079	357 aa	Predicted RBP	2.54	□□□□□ -2
SKP2	YNL311C	PIG2	P40187	538 aa		2.54	□□□□□ -2
SKP2	YNL311C	QDR1	P40475	563 aa		2.54	□□□□□ -2
SKP2	YNL311C	RHO4	Q00246	291 aa		2.54	□□□□□ -2
SKP2	YNL311C	PET191	Q02772	108 aa		2.54	□□□□□ -2
SKP2	YNL311C	SWP1	Q02795	286 aa		2.54	□□□□□ -2
SKP2	YNL311C	NAN1	Q02931	896 aa	Known RBP	2.54	□□□□□ -2
SKP2	YNL311C	RSN1	Q03516	953 aa		2.54	□□□□□ -2
SKP2	YNL311C	UTP21	Q06078	939 aa	Predicted RBP	2.54	□□□□□ -2
SKP2	YNL311C	YLR177W	Q06251	628 aa		2.54	□□□□□ -2
SKP2	YNL311C	NDL1	Q06568	189 aa		2.54	□□□□□ -2
SKP2	YNL311C	WTM1	Q12363	437 aa	Known RBP	2.54	□□□□□ -2
SKP2	YNL311C	KSS1	P14681	368 aa		2.53	□□□□□ -2
SKP2	YNL311C	SPO12	P17123	173 aa		2.53	□□□□□ -2
SKP2	YNL311C	SCO1	P23833	295 aa		2.53	□□□□□ -2
SKP2	YNL311C	PTM1	P32857	523 aa		2.53	□□□□□ -2
SKP2	YNL311C	POP4	P38336	279 aa		2.53	□□□□□ -2
SKP2	YNL311C	REV7	P38927	245 aa		2.53	□□□□□ -2
SKP2	YNL311C	IMA5	P40884	581 aa		2.53	□□□□□ -2
SKP2	YNL311C	YFL012W	P43580	148 aa		2.53	□□□□□ -2
SKP2	YNL311C	BTN2	P53286	410 aa		2.53	□□□□□ -2
SKP2	YNL311C	RIM13	Q03792	727 aa		2.53	□□□□□ -2
SKP2	YNL311C	SWF1	Q04629	336 aa		2.53	□□□□□ -2
SKP2	YNL311C	PUN1	Q06991	263 aa		2.53	□□□□□ -2
SKP2	YNL311C	MFG1	Q07684	458 aa		2.53	□□□□□ -2
SKP2	YNL311C	CRT10	Q08226	957 aa		2.53	□□□□□ -2
SKP2	YNL311C	SRL1	Q08673	210 aa		2.53	□□□□□ -2
SKP2	YNL311C	RDL2	Q08742	149 aa	Known RBP	2.53	□□□□□ -2
SKP2	YNL311C	ATG34	Q12292	412 aa		2.53	□□□□□ -2
SKP2	YNL311C	AHA1	Q12449	350 aa	Known RBP	2.53	□□□□□ -2
SKP2	YNL311C	NOP58	Q12499	511 aa	Known RBP	2.53	□□□□□ -2
SKP2	YNL311C	MHT1	Q12525	324 aa		2.53	□□□□□ -2
SKP2	YNL311C	GPA2	P10823	449 aa		2.53	□□□□□ -2
SKP2	YNL311C	PHO13	P19881	312 aa		2.53	□□□□□ -2
SKP2	YNL311C	AMD2	P22580	549 aa		2.53	□□□□□ -2
SKP2	YNL311C	HXT1	P32465	570 aa		2.53	□□□□□ -2
SKP2	YNL311C	ISC10	P32645	267 aa		2.53	□□□□□ -2
SKP2	YNL311C	COX13	P32799	129 aa		2.53	□□□□□ -2
SKP2	YNL311C	YME2	P32843	850 aa		2.53	□□□□□ -2
SKP2	YNL311C	YPT7	P32939	208 aa		2.53	□□□□□ -2
SKP2	YNL311C	CLG1	P35190	452 aa		2.53	□□□□□ -2
SKP2	YNL311C	PIC2	P40035	300 aa		2.53	□□□□□ -2
SKP2	YNL311C	PFK26	P40433	827 aa	Known RBP	2.53	□□□□□ -2
SKP2	YNL311C	GLR1	P41921	483 aa	Known RBP	2.53	□□□□□ -2
SKP2	YNL311C	GZF3	P42944	551 aa	Known RBP	2.53	□□□□□ -2
SKP2	YNL311C	MIC19	P43594	170 aa		2.53	□□□□□ -2
SKP2	YNL311C	CHA4	P43634	648 aa		2.53	□□□□□ -2
SKP2	YNL311C	COS1	P53822	381 aa		2.53	□□□□□ -2
SKP2	YNL311C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.53	□□□□□ -2	not detected
SKP2	YNL311C	CTR9	P89105	1077 aa		2.53	□□□□□ -2
SKP2	YNL311C	MTG1	Q03151	367 aa	Predicted RBP	2.53	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms