RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W YHI9P38765 294 aa5.51□□□□□ -1.53
SNN1YNL086W PRP39P39682 629 aaKnown RBP5.51□□□□□ -1.53
SNN1YNL086W CCT7P42943 550 aaKnown RBP5.51□□□□□ -1.53
SNN1YNL086W ROG1P53118 685 aa5.51□□□□□ -1.53
SNN1YNL086W YGR066CP53242 292 aa5.51□□□□□ -1.53
SNN1YNL086W MKC7P53379 596 aa5.51□□□□□ -1.53
SNN1YNL086W SPP2Q02521 185 aa5.51□□□□□ -1.53
SNN1YNL086W YMR155WQ03795 547 aa5.51□□□□□ -1.53
SNN1YNL086W PLM2Q04383 521 aa5.51□□□□□ -1.53
SNN1YNL086W YMR114CQ04471 368 aaKnown RBP5.51□□□□□ -1.53
SNN1YNL086W BCH1Q05029 724 aa5.51□□□□□ -1.53
SNN1YNL086W GLO2Q05584 274 aa5.51□□□□□ -1.53
SNN1YNL086W YEH1Q07804 573 aa5.51□□□□□ -1.53
SNN1YNL086W RRP40Q08285 240 aaKnown RBP5.51□□□□□ -1.53
SNN1YNL086W RTN2Q12443 393 aa5.51□□□□□ -1.53
SNN1YNL086W YJR112W-AQ3E743 109 aa5.51□□□□□ -1.53
SNN1YNL086W ARG4P04076 463 aaPredicted RBP5.5□□□□□ -1.53
SNN1YNL086W TPK2P06245 380 aa5.5□□□□□ -1.53
SNN1YNL086W PWP1P21304 576 aaKnown RBP5.5□□□□□ -1.53
SNN1YNL086W VMA16P23968 213 aa5.5□□□□□ -1.53
SNN1YNL086W HXT1P32465 570 aa5.5□□□□□ -1.53
SNN1YNL086W MRPL10P36520 322 aa5.5□□□□□ -1.53
SNN1YNL086W SRO77P38163 1010 aa5.5□□□□□ -1.53
SNN1YNL086W POP4P38336 279 aa5.5□□□□□ -1.53
SNN1YNL086W VBA2P38358 474 aaKnown RBP5.5□□□□□ -1.53
SNN1YNL086W RIX1P38883 763 aaPredicted RBP5.5□□□□□ -1.53
SNN1YNL086W NPT1P39683 429 aaKnown RBP5.5□□□□□ -1.53
SNN1YNL086W HAT2P39984 401 aa5.5□□□□□ -1.53
SNN1YNL086W MIT1P40002 666 aa5.5□□□□□ -1.53
SNN1YNL086W PHM8P40025 321 aa5.5□□□□□ -1.53
SNN1YNL086W MRX1P40050 688 aa5.5□□□□□ -1.53
SNN1YNL086W UTP25P40498 721 aaKnown RBP5.5□□□□□ -1.53
SNN1YNL086W ICE2P40499 491 aa5.5□□□□□ -1.53
SNN1YNL086W APQ12P40532 138 aa5.5□□□□□ -1.53
SNN1YNL086W STE24P47154 453 aa5.5□□□□□ -1.53
SNN1YNL086W SEH1P53011 349 aaKnown RBP5.5□□□□□ -1.53
SNN1YNL086W ALF1P53904 254 aa5.5□□□□□ -1.53
SNN1YNL086W GOT1Q03554 138 aa5.5□□□□□ -1.53
SNN1YNL086W TAF12Q03761 539 aa5.5□□□□□ -1.53
SNN1YNL086W BUD22Q04347 519 aaKnown RBP5.5□□□□□ -1.53
SNN1YNL086W TAF3Q12297 353 aa5.5□□□□□ -1.53
SNN1YNL086W AHA1Q12449 350 aaKnown RBP5.5□□□□□ -1.53
SNN1YNL086W SPS100P13130 326 aa5.49□□□□□ -1.53
SNN1YNL086W PDX1P16451 410 aa5.49□□□□□ -1.53
SNN1YNL086W MAK32P23060 363 aa5.49□□□□□ -1.53
SNN1YNL086W DMC1P25453 334 aa5.49□□□□□ -1.53
SNN1YNL086W PTC6P25646 442 aa5.49□□□□□ -1.53
SNN1YNL086W YKL100CP34248 587 aa5.49□□□□□ -1.53
SNN1YNL086W ASC1P38011 319 aaKnown RBP5.49□□□□□ -1.53
SNN1YNL086W SEC31P38968 1273 aaKnown RBP5.49□□□□□ -1.53
SNN1YNL086W MEP1P40260 492 aa5.49□□□□□ -1.53
SNN1YNL086W SEC27P41811 889 aaKnown RBP5.49□□□□□ -1.53
SNN1YNL086W SWP82P43554 623 aa5.49□□□□□ -1.53
SNN1YNL086W ECO1P43605 281 aa5.49□□□□□ -1.53
SNN1YNL086W BOL2P53082 120 aa5.49□□□□□ -1.53
SNN1YNL086W YGL117WP53133 265 aa5.49□□□□□ -1.53
SNN1YNL086W CLD1P53264 445 aa5.49□□□□□ -1.53
SNN1YNL086W PDR16P53860 351 aaKnown RBP5.49□□□□□ -1.53
SNN1YNL086W RAD33Q04231 177 aa5.49□□□□□ -1.53
SNN1YNL086W CDC123Q05791 360 aa5.49□□□□□ -1.53
SNN1YNL086W UBX3Q12229 455 aa5.49□□□□□ -1.53
SNN1YNL086W RRP42Q12277 265 aaPredicted RBP5.49□□□□□ -1.53
SNN1YNL086W PRP46Q12417 451 aaPredicted RBP5.49□□□□□ -1.53
SNN1YNL086W FAS1P07149 2051 aaKnown RBP5.48□□□□□ -1.53
SNN1YNL086W TEF1P02994 458 aaKnown RBP5.48□□□□□ -1.53
SNN1YNL086W HXK2P04807 486 aaKnown RBP5.48□□□□□ -1.53
SNN1YNL086W STE3P06783 470 aa5.48□□□□□ -1.53
SNN1YNL086W DFR1P07807 211 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
SNN1YNL086W CDC43P18898 376 aa5.48□□□□□ -1.53
SNN1YNL086W SOF1P33750 489 aaKnown RBP5.48□□□□□ -1.53
SNN1YNL086W OAR1P35731 278 aa5.48□□□□□ -1.53
SNN1YNL086W RSM22P36056 628 aa5.48□□□□□ -1.53
SNN1YNL086W GRE3P38715 327 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
SNN1YNL086W STB2P46679 850 aa5.48□□□□□ -1.53
SNN1YNL086W BPL1P48445 690 aaPredicted RBP5.48□□□□□ -1.53
SNN1YNL086W MPS1P54199 764 aa5.48□□□□□ -1.53
SNN1YNL086W RSM28Q03430 361 aa5.48□□□□□ -1.53
SNN1YNL086W APC4Q04601 652 aa5.48□□□□□ -1.53
SNN1YNL086W VPS38Q05919 439 aa5.48□□□□□ -1.53
SNN1YNL086W SPE4Q12455 300 aa5.48□□□□□ -1.53
SNN1YNL086W YPT6Q99260 215 aa5.48□□□□□ -1.53
SNN1YNL086W Q0010Q9ZZX9 128 aa5.48□□□□□ -1.53
SNN1YNL086W ILV2P07342 687 aaKnown RBP5.47□□□□□ -1.53
SNN1YNL086W SSC1P0CS90 654 aaKnown RBP5.47□□□□□ -1.53
SNN1YNL086W PEP5P12868 1029 aa5.47□□□□□ -1.53
SNN1YNL086W CBP4P37267 147 aa5.47□□□□□ -1.53
SNN1YNL086W MET28P40573 187 aa5.47□□□□□ -1.53
SNN1YNL086W YRB1P41920 201 aaKnown RBP5.47□□□□□ -1.53
SNN1YNL086W IST1P53843 298 aaPredicted RBP5.47□□□□□ -1.53
SNN1YNL086W YPR174CQ06616 221 aaPredicted RBP5.47□□□□□ -1.53
SNN1YNL086W RAD1P06777 1100 aa5.46□□□□□ -1.54
SNN1YNL086W YSF3P0C074 85 aaPredicted RBP5.46□□□□□ -1.54
SNN1YNL086W URA7P28274 579 aaKnown RBP5.46□□□□□ -1.54
SNN1YNL086W YIM1P28625 365 aa5.46□□□□□ -1.54
SNN1YNL086W PTM1P32857 523 aa5.46□□□□□ -1.54
SNN1YNL086W MUP3P38734 546 aa5.46□□□□□ -1.54
SNN1YNL086W BUR6P40096 142 aa5.46□□□□□ -1.54
SNN1YNL086W MET18P40469 1032 aa5.46□□□□□ -1.54
SNN1YNL086W YFL015CP43578 164 aa5.46□□□□□ -1.54
SNN1YNL086W YJR141WP47172 347 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms