RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W WSC4P38739 605 aa2.69□□□□□ -1.98
VPS38YLR360W PGU1P47180 361 aa2.69□□□□□ -1.98
VPS38YLR360W YIP5P53108 310 aa2.69□□□□□ -1.98
VPS38YLR360W RTT102P53330 157 aa2.69□□□□□ -1.98
VPS38YLR360W REX2P54964 269 aaKnown RBP2.69□□□□□ -1.98
VPS38YLR360W YMR010WQ03687 405 aa2.69□□□□□ -1.98
VPS38YLR360W SXM1Q04175 944 aaKnown RBP2.69□□□□□ -1.98
VPS38YLR360W SPO23P33757 523 aa2.68□□□□□ -1.98
VPS38YLR360W SPP381P38282 291 aaPredicted RBP2.68□□□□□ -1.98
VPS38YLR360W TRF5P48561 642 aaKnown RBP2.68□□□□□ -1.98
VPS38YLR360W YGR018CP53211 109 aa2.68□□□□□ -1.98
VPS38YLR360W TPS1Q00764 495 aaKnown RBP2.68□□□□□ -1.98
VPS38YLR360W YHC1Q05900 231 aaKnown RBP2.68□□□□□ -1.98
VPS38YLR360W NDL1Q06568 189 aa2.68□□□□□ -1.98
VPS38YLR360W MEX67Q99257 599 aaKnown RBP2.68□□□□□ -1.98
VPS38YLR360W RPS18AP0CX55 146 aaKnown RBP2.68□□□□□ -1.98
VPS38YLR360W RPS18BP0CX56 146 aaPredicted RBP2.68□□□□□ -1.98
VPS38YLR360W CMK2P22517 447 aa2.68□□□□□ -1.98
VPS38YLR360W GIT1P25346 518 aa2.68□□□□□ -1.98
VPS38YLR360W ALD5P40047 520 aaKnown RBP2.68□□□□□ -1.98
VPS38YLR360W SEC27P41811 889 aaKnown RBP2.68□□□□□ -1.98
VPS38YLR360W RSC1P53236 928 aa2.68□□□□□ -1.98
VPS38YLR360W AAD15Q08361 143 aa2.68□□□□□ -1.98
VPS38YLR360W HMS1Q12398 434 aa2.68□□□□□ -1.98
VPS38YLR360W PAR32Q12515 295 aaKnown RBP2.68□□□□□ -1.98
VPS38YLR360W RNA1P11745 407 aaKnown RBP2.67□□□□□ -1.98
VPS38YLR360W TOA2P32774 122 aa2.67□□□□□ -1.98
VPS38YLR360W SOL2P37262 315 aa2.67□□□□□ -1.98
VPS38YLR360W SEC9P40357 651 aa2.67□□□□□ -1.98
VPS38YLR360W ABM1P47146 123 aa2.67□□□□□ -1.98
VPS38YLR360W ASN2P49090 572 aaKnown RBP2.67□□□□□ -1.98
VPS38YLR360W VPS9P54787 451 aa2.67□□□□□ -1.98
VPS38YLR360W ENT5Q03769 411 aaKnown RBP2.67□□□□□ -1.98
VPS38YLR360W MSC3Q05812 728 aa2.67□□□□□ -1.98
VPS38YLR360W STE7P06784 515 aa2.66□□□□□ -1.98
VPS38YLR360W MRPL27P36526 146 aaPredicted RBP2.66□□□□□ -1.98
VPS38YLR360W LSM12P38828 187 aaKnown RBP2.66□□□□□ -1.98
VPS38YLR360W YHR177WP38867 453 aa2.66□□□□□ -1.98
VPS38YLR360W GDI1P39958 451 aaKnown RBP2.66□□□□□ -1.98
VPS38YLR360W FLC3P53121 802 aa2.66□□□□□ -1.98
VPS38YLR360W IPK1Q06667 281 aa2.66□□□□□ -1.98
VPS38YLR360W LRP1P38801 184 aaKnown RBP2.65□□□□□ -1.99
VPS38YLR360W MLH1P38920 769 aa2.65□□□□□ -1.99
VPS38YLR360W CIN2P46670 268 aa2.65□□□□□ -1.99
VPS38YLR360W YDR115WQ04598 105 aa2.65□□□□□ -1.99
VPS38YLR360W ERP4Q12450 207 aa2.65□□□□□ -1.99
VPS38YLR360W ZUO1P32527 433 aaKnown RBP2.64□□□□□ -1.99
VPS38YLR360W MDL1P33310 695 aa2.64□□□□□ -1.99
VPS38YLR360W BMT2P38278 337 aa2.64□□□□□ -1.99
VPS38YLR360W PEX22P39718 180 aa2.64□□□□□ -1.99
VPS38YLR360W YER184CP39961 794 aa2.64□□□□□ -1.99
VPS38YLR360W YFL012WP43580 148 aa2.64□□□□□ -1.99
VPS38YLR360W PRP38Q00723 242 aaPredicted RBP2.64□□□□□ -1.99
VPS38YLR360W RPL21AQ02753 160 aaKnown RBP2.64□□□□□ -1.99
VPS38YLR360W YLR177WQ06251 628 aa2.64□□□□□ -1.99
VPS38YLR360W GAT3Q07928 141 aa2.64□□□□□ -1.99
VPS38YLR360W MCT1Q12283 360 aa2.64□□□□□ -1.99
VPS38YLR360W RPL21BQ12672 160 aaKnown RBP2.64□□□□□ -1.99
VPS38YLR360W CHA1P25379 360 aaKnown RBP2.63□□□□□ -1.99
VPS38YLR360W RPL16AP26784 199 aaKnown RBP2.63□□□□□ -1.99
VPS38YLR360W ECT1P33412 323 aa2.63□□□□□ -1.99
VPS38YLR360W HEM14P40012 539 aa2.63□□□□□ -1.99
VPS38YLR360W EPL1P43572 832 aa2.63□□□□□ -1.99
VPS38YLR360W KEG1P43614 200 aa2.63□□□□□ -1.99
VPS38YLR360W YPL107WQ02873 248 aa2.63□□□□□ -1.99
VPS38YLR360W NOP6Q07623 225 aaKnown RBP2.63□□□□□ -1.99
VPS38YLR360W IES4Q08561 116 aa2.63□□□□□ -1.99
VPS38YLR360W SRN2Q99176 213 aa2.63□□□□□ -1.99
VPS38YLR360W ASP3-2P0CX77 362 aa2.62□□□□□ -1.99
VPS38YLR360W ASP3-3P0CX78 362 aa2.62□□□□□ -1.99
VPS38YLR360W ASP3-4P0CX79 362 aa2.62□□□□□ -1.99
VPS38YLR360W ASP3-1P0CZ17 362 aa2.62□□□□□ -1.99
VPS38YLR360W MRPL8P22353 238 aa2.62□□□□□ -1.99
VPS38YLR360W DPH2P32461 534 aa2.62□□□□□ -1.99
VPS38YLR360W PDC2P32896 925 aa2.62□□□□□ -1.99
VPS38YLR360W YBR241CP38142 488 aa2.62□□□□□ -1.99
VPS38YLR360W CTK3P46963 296 aaPredicted RBP2.62□□□□□ -1.99
VPS38YLR360W VHT1P53241 593 aa2.62□□□□□ -1.99
VPS38YLR360W CWC22P53333 577 aaKnown RBP2.62□□□□□ -1.99
VPS38YLR360W FSH2Q05015 223 aa2.62□□□□□ -1.99
VPS38YLR360W YDR061WQ12298 539 aa2.62□□□□□ -1.99
VPS38YLR360W YOR338WQ99326 363 aa2.62□□□□□ -1.99
VPS38YLR360W HEM4P06174 275 aa2.61□□□□□ -1.99
VPS38YLR360W RRP7P25368 297 aaPredicted RBP2.61□□□□□ -1.99
VPS38YLR360W ANP1P32629 500 aa2.61□□□□□ -1.99
VPS38YLR360W PEX5P35056 612 aa2.61□□□□□ -1.99
VPS38YLR360W ATP22P50273 684 aaPredicted RBP2.61□□□□□ -1.99
VPS38YLR360W SEH1P53011 349 aaKnown RBP2.61□□□□□ -1.99
VPS38YLR360W VEL1P53058 206 aa2.61□□□□□ -1.99
VPS38YLR360W VAC7P53950 1165 aa2.61□□□□□ -1.99
VPS38YLR360W YLH47Q06493 454 aa2.61□□□□□ -1.99
VPS38YLR360W YDL109CQ12103 647 aa2.61□□□□□ -1.99
VPS38YLR360W SFM1Q12314 213 aa2.61□□□□□ -1.99
VPS38YLR360W MAS2P11914 482 aa2.6□□□□□ -1.99
VPS38YLR360W PUT4P15380 627 aa2.6□□□□□ -1.99
VPS38YLR360W LDS1P31379 325 aa2.6□□□□□ -1.99
VPS38YLR360W WSS1P38838 269 aa2.6□□□□□ -1.99
VPS38YLR360W MLC1P53141 149 aa2.6□□□□□ -1.99
VPS38YLR360W SHS1Q07657 551 aa2.6□□□□□ -1.99
VPS38YLR360W SSE1P32589 693 aaKnown RBP2.59□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 83 ms