RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	AIM45	Q12480	344 aa	Known RBP	1.35	□□□□□ -2.19
SMC4	YLR086W	MEX67	Q99257	599 aa	Known RBP	1.35	□□□□□ -2.19
SMC4	YLR086W	NFT1	P0CE68	1218 aa		1.35	□□□□□ -2.19
SMC4	YLR086W	SPT15	P13393	240 aa	Known RBP	1.35	□□□□□ -2.19
SMC4	YLR086W	DBP3	P20447	523 aa	Known RBP	1.35	□□□□□ -2.19
SMC4	YLR086W	TRS65	P32893	560 aa		1.35	□□□□□ -2.19
SMC4	YLR086W	BUD2	P33314	1104 aa		1.35	□□□□□ -2.19
SMC4	YLR086W	SKN1	P33336	771 aa		1.35	□□□□□ -2.19
SMC4	YLR086W	MSG5	P38590	489 aa		1.35	□□□□□ -2.19
SMC4	YLR086W	LSM12	P38828	187 aa	Known RBP	1.35	□□□□□ -2.19
SMC4	YLR086W	FAD1	P38913	306 aa		1.35	□□□□□ -2.19
SMC4	YLR086W	PCP1	P53259	346 aa		1.35	□□□□□ -2.19
SMC4	YLR086W	ARP5	P53946	755 aa		1.35	□□□□□ -2.19
SMC4	YLR086W	HXT11	P54862	567 aa		1.35	□□□□□ -2.19
SMC4	YLR086W	ALE1	Q08548	619 aa		1.35	□□□□□ -2.19
SMC4	YLR086W	YPR022C	Q12139	1133 aa		1.35	□□□□□ -2.19
SMC4	YLR086W	RSF2	P46974	1380 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	HEM2	P05373	342 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	MCK1	P21965	375 aa	Known RBP	1.34	□□□□□ -2.19
SMC4	YLR086W	YCL068C	P25593	260 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	ERG9	P29704	444 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	DPH2	P32461	534 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	YSC83	P32792	385 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	ATP3	P38077	311 aa	Known RBP	1.34	□□□□□ -2.19
SMC4	YLR086W	STP2	P38704	541 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	YML122C	Q03207	126 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	PRM6	Q04705	352 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	SNA4	Q07549	140 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	NRT1	Q08485	598 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	ESA1	Q08649	445 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	YOP1	Q12402	180 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	SET6	Q12529	373 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	YER078W-A	Q3E7A2	54 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	KRE5	P22023	1365 aa		1.34	□□□□□ -2.19
SMC4	YLR086W	YRF1-2	P40105	1681 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	CBP2	P03874	630 aa	Predicted RBP	1.34	□□□□□ -2.2
SMC4	YLR086W	PHO2	P07269	559 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	RNR2	P09938	399 aa	Known RBP	1.34	□□□□□ -2.2
SMC4	YLR086W	YKR015C	P36111	568 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	PCH2	P38126	564 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	SNM1	P40993	198 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	LOH1	P47055	219 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	MPP10	P47083	593 aa	Known RBP	1.34	□□□□□ -2.2
SMC4	YLR086W	PMT5	P52867	743 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	YIF1	P53845	314 aa	Known RBP	1.34	□□□□□ -2.2
SMC4	YLR086W	AQR1	P53943	586 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	CRZ1	P53968	678 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	YPL199C	Q08954	240 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	PLP2	Q12017	286 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	YDR061W	Q12298	539 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	YDR262W	Q12331	272 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	ATP1	P07251	545 aa	Known RBP	1.34	□□□□□ -2.2
SMC4	YLR086W	GCD2	P12754	651 aa	Predicted RBP	1.34	□□□□□ -2.2
SMC4	YLR086W	FAR1	P21268	830 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	FUN26	P31381	517 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	MSK1	P32048	576 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	SUR1	P33300	382 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	ANR2	P36090	516 aa	Predicted RBP	1.34	□□□□□ -2.2
SMC4	YLR086W	KAP104	P38217	918 aa	Known RBP	1.34	□□□□□ -2.2
SMC4	YLR086W	SSO2	P39926	295 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	KEG1	P43614	200 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	IMP4	P53941	290 aa	Known RBP	1.34	□□□□□ -2.2
SMC4	YLR086W	LDS2	Q08218	356 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	YLR108C	Q12259	485 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	APC1	P53886	1748 aa		1.34	□□□□□ -2.2
SMC4	YLR086W	YRF1-1	P0CX20	1796 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	YRF1-5	P0CX21	1796 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	YRF1-8	P0CX22	1796 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	RPL22A	P05749	121 aa	Known RBP	1.33	□□□□□ -2.2
SMC4	YLR086W	DST1	P07273	309 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	SAG1	P20840	650 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	DAL80	P26343	269 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	PEX2	P32800	271 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	OPY1	P38271	328 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	MMF1	P40185	145 aa	Known RBP	1.33	□□□□□ -2.2
SMC4	YLR086W	INA22	P40576	216 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	PRM1	P53835	661 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	ASA1	Q06822	443 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	MLP1	Q02455	1875 aa	Known RBP	1.33	□□□□□ -2.2
SMC4	YLR086W	CDC21	P06785	304 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	SCH9	P11792	824 aa	Known RBP	1.33	□□□□□ -2.2
SMC4	YLR086W	YAT2	P40017	923 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	LYS12	P40495	371 aa	Known RBP	1.33	□□□□□ -2.2
SMC4	YLR086W	YGR210C	P42942	411 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	YPI1	P43587	155 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	TOS2	P50078	622 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	PIB2	P53191	635 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	YMR027W	Q04371	470 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	YGK3	Q12222	375 aa	Predicted RBP	1.33	□□□□□ -2.2
SMC4	YLR086W	YCL021W-A	Q96VH3	125 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	CDC37	P06101	506 aa	Known RBP	1.33	□□□□□ -2.2
SMC4	YLR086W	PDE2	P06776	526 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	RPS16A	P0CX51	143 aa	Known RBP	1.33	□□□□□ -2.2
SMC4	YLR086W	RPS16B	P0CX52	143 aa	Known RBP	1.33	□□□□□ -2.2
SMC4	YLR086W	CPR3	P25719	182 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	DOA1	P36037	715 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	YBR139W	P38109	508 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	RIB5	P38145	238 aa		1.33	□□□□□ -2.2
SMC4	YLR086W	YER079W	P40052	210 aa	Known RBP	1.33	□□□□□ -2.2
SMC4	YLR086W	AZR1	P50080	613 aa		1.33	□□□□□ -2.2

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms