RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C YAT2P40017 923 aa4.73□□□□□ -1.65
YIR043CYIR043C SEC27P41811 889 aaKnown RBP4.73□□□□□ -1.65
YIR043CYIR043C YGL260WP53056 76 aa4.73□□□□□ -1.65
YIR043CYIR043C MTM1P53320 366 aa4.73□□□□□ -1.65
YIR043CYIR043C CAB5Q03941 241 aa4.73□□□□□ -1.65
YIR043CYIR043C NAT4Q04751 285 aa4.73□□□□□ -1.65
YIR043CYIR043C MRPL35Q06678 367 aa4.73□□□□□ -1.65
YIR043CYIR043C TSR1Q07381 788 aaKnown RBP4.73□□□□□ -1.65
YIR043CYIR043C GAT3Q07928 141 aa4.73□□□□□ -1.65
YIR043CYIR043C YOL075CQ08234 1294 aa4.73□□□□□ -1.65
YIR043CYIR043C EAF3Q12432 401 aa4.73□□□□□ -1.65
YIR043CYIR043C YCR024C-BQ3E7Z8 88 aa4.73□□□□□ -1.65
YIR043CYIR043C YBR298C-AQ8TGK4 73 aa4.73□□□□□ -1.65
YIR043CYIR043C GAL7P08431 366 aa4.72□□□□□ -1.65
YIR043CYIR043C ZUO1P32527 433 aaKnown RBP4.72□□□□□ -1.65
YIR043CYIR043C FMP46P36141 133 aaKnown RBP4.72□□□□□ -1.65
YIR043CYIR043C SWC5P38326 303 aa4.72□□□□□ -1.65
YIR043CYIR043C ALF1P53904 254 aa4.72□□□□□ -1.65
YIR043CYIR043C RTT103Q05543 409 aa4.72□□□□□ -1.65
YIR043CYIR043C YDR262WQ12331 272 aa4.72□□□□□ -1.65
YIR043CYIR043C APC2Q12440 853 aa4.72□□□□□ -1.65
YIR043CYIR043C YER078W-AQ3E7A2 54 aa4.72□□□□□ -1.65
YIR043CYIR043C PIS1P06197 220 aaKnown RBP4.71□□□□□ -1.66
YIR043CYIR043C PUT4P15380 627 aa4.71□□□□□ -1.66
YIR043CYIR043C CIN8P27895 1000 aa4.71□□□□□ -1.66
YIR043CYIR043C YPS1P32329 569 aa4.71□□□□□ -1.66
YIR043CYIR043C RAD5P32849 1169 aaPredicted RBP4.71□□□□□ -1.66
YIR043CYIR043C SDH3P33421 198 aa4.71□□□□□ -1.66
YIR043CYIR043C MRPS5P33759 307 aa4.71□□□□□ -1.66
YIR043CYIR043C NDT80P38830 627 aa4.71□□□□□ -1.66
YIR043CYIR043C YHR182WP38870 785 aa4.71□□□□□ -1.66
YIR043CYIR043C CCT4P39078 528 aaKnown RBP4.71□□□□□ -1.66
YIR043CYIR043C YMR134WP40207 237 aa4.71□□□□□ -1.66
YIR043CYIR043C LCB3P47013 409 aa4.71□□□□□ -1.66
YIR043CYIR043C YMR102CQ03177 834 aa4.71□□□□□ -1.66
YIR043CYIR043C RRN11Q04712 507 aa4.71□□□□□ -1.66
YIR043CYIR043C YOR387CQ08910 206 aa4.71□□□□□ -1.66
YIR043CYIR043C YIL002W-AQ3E7Z5 69 aa4.71□□□□□ -1.66
YIR043CYIR043C RPL18AP0CX49 186 aaKnown RBP4.7□□□□□ -1.66
YIR043CYIR043C RPL18BP0CX50 186 aaKnown RBP4.7□□□□□ -1.66
YIR043CYIR043C OM45P16547 393 aa4.7□□□□□ -1.66
YIR043CYIR043C RIB7P33312 244 aa4.7□□□□□ -1.66
YIR043CYIR043C ECM8P38246 354 aa4.7□□□□□ -1.66
YIR043CYIR043C KRE9P39005 276 aa4.7□□□□□ -1.66
YIR043CYIR043C CWC25P53854 179 aaKnown RBP4.7□□□□□ -1.66
YIR043CYIR043C HER2Q03557 464 aa4.7□□□□□ -1.66
YIR043CYIR043C PRM6Q04705 352 aa4.7□□□□□ -1.66
YIR043CYIR043C PBA1Q05778 276 aa4.7□□□□□ -1.66
YIR043CYIR043C BUR2Q05949 395 aa4.7□□□□□ -1.66
YIR043CYIR043C LOT6Q07923 191 aa4.7□□□□□ -1.66
YIR043CYIR043C SMC5Q08204 1093 aa4.7□□□□□ -1.66
YIR043CYIR043C MEX67Q99257 599 aaKnown RBP4.7□□□□□ -1.66
YIR043CYIR043C DET1Q99288 334 aaKnown RBP4.7□□□□□ -1.66
YIR043CYIR043C NAM2P11325 894 aa4.69□□□□□ -1.66
YIR043CYIR043C MYO3P36006 1272 aa4.69□□□□□ -1.66
YIR043CYIR043C ATG7P38862 630 aa4.69□□□□□ -1.66
YIR043CYIR043C MAM33P40513 266 aa4.69□□□□□ -1.66
YIR043CYIR043C AIP1P46680 615 aaKnown RBP4.69□□□□□ -1.66
YIR043CYIR043C AIM24P47127 394 aa4.69□□□□□ -1.66
YIR043CYIR043C LST7P53237 242 aa4.69□□□□□ -1.66
YIR043CYIR043C MTQ1P53944 314 aa4.69□□□□□ -1.66
YIR043CYIR043C TDA1Q03533 586 aa4.69□□□□□ -1.66
YIR043CYIR043C YLH47Q06493 454 aa4.69□□□□□ -1.66
YIR043CYIR043C YLR413WQ06689 675 aa4.69□□□□□ -1.66
YIR043CYIR043C HTZ1Q12692 134 aaKnown RBP4.69□□□□□ -1.66
YIR043CYIR043C FAR1P21268 830 aa4.68□□□□□ -1.66
YIR043CYIR043C UTR1P21373 530 aa4.68□□□□□ -1.66
YIR043CYIR043C POP5P28005 173 aa4.68□□□□□ -1.66
YIR043CYIR043C KAR9P32526 644 aa4.68□□□□□ -1.66
YIR043CYIR043C YHR131CP38835 850 aa4.68□□□□□ -1.66
YIR043CYIR043C PTH1P38876 190 aaKnown RBP4.68□□□□□ -1.66
YIR043CYIR043C RBG1P39729 369 aa4.68□□□□□ -1.66
YIR043CYIR043C BTT1P40314 149 aaPredicted RBP4.68□□□□□ -1.66
YIR043CYIR043C RIB4P50861 169 aaPredicted RBP4.68□□□□□ -1.66
YIR043CYIR043C EGD1Q02642 157 aaKnown RBP4.68□□□□□ -1.66
YIR043CYIR043C YGK3Q12222 375 aaPredicted RBP4.68□□□□□ -1.66
YIR043CYIR043C MRPL23Q12487 163 aaPredicted RBP4.68□□□□□ -1.66
YIR043CYIR043C HHF1P02309 103 aaKnown RBP4.67□□□□□ -1.66
YIR043CYIR043C ARF2P19146 181 aaKnown RBP4.67□□□□□ -1.66
YIR043CYIR043C BUD2P33314 1104 aa4.67□□□□□ -1.66
YIR043CYIR043C PAD1P33751 242 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
YIR043CYIR043C HAC1P41546 238 aa4.67□□□□□ -1.66
YIR043CYIR043C YJR030CP47101 745 aa4.67□□□□□ -1.66
YIR043CYIR043C SCS3P53012 380 aa4.67□□□□□ -1.66
YIR043CYIR043C PNC1P53184 216 aaKnown RBP4.67□□□□□ -1.66
YIR043CYIR043C DBP6P53734 629 aaKnown RBP4.67□□□□□ -1.66
YIR043CYIR043C PCL9Q12477 304 aa4.67□□□□□ -1.66
YIR043CYIR043C RRP36Q12481 300 aaPredicted RBP4.67□□□□□ -1.66
YIR043CYIR043C YMR230W-AQ3E7B5 62 aa4.67□□□□□ -1.66
YIR043CYIR043C RPS8AP0CX39 200 aaKnown RBP4.66□□□□□ -1.66
YIR043CYIR043C RPS8BP0CX40 200 aaKnown RBP4.66□□□□□ -1.66
YIR043CYIR043C DEG1P31115 442 aaKnown RBP4.66□□□□□ -1.66
YIR043CYIR043C IST2P38250 946 aa4.66□□□□□ -1.66
YIR043CYIR043C IML3P38265 245 aa4.66□□□□□ -1.66
YIR043CYIR043C PEX32P38292 413 aa4.66□□□□□ -1.66
YIR043CYIR043C KEG1P43614 200 aa4.66□□□□□ -1.66
YIR043CYIR043C TRF5P48561 642 aaKnown RBP4.66□□□□□ -1.66
YIR043CYIR043C NAS6P50086 228 aa4.66□□□□□ -1.66
YIR043CYIR043C VOA1P53262 265 aa4.66□□□□□ -1.66
YIR043CYIR043C YGR168CP53293 376 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 1164.2 ms