RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHQ1	YIL104C	GAL3	P13045	520 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	AAC3	P18238	307 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	PWP1	P21304	576 aa	Known RBP	3.1	□□□□□ -1.91
SHQ1	YIL104C	TFC1	P32367	649 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	NUP2	P32499	720 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	MNN9	P39107	395 aa	Known RBP	3.1	□□□□□ -1.91
SHQ1	YIL104C	SWD1	P39706	426 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	ALG5	P40350	334 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	ALB1	P47019	175 aa	Predicted RBP	3.1	□□□□□ -1.91
SHQ1	YIL104C	YPL107W	Q02873	248 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	YDR541C	Q03049	344 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	YMR210W	Q03649	449 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	YAP6	Q03935	383 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	RAD30	Q04049	632 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	SMA2	Q04658	369 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	GPI11	Q06636	219 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	YLL007C	Q07799	665 aa		3.1	□□□□□ -1.91
SHQ1	YIL104C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
SHQ1	YIL104C	RPL24A	P04449	155 aa	Known RBP	3.09	□□□□□ -1.91
SHQ1	YIL104C	ATP4	P05626	244 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	MER1	P16523	270 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	RPS1B	P23248	255 aa	Known RBP	3.09	□□□□□ -1.91
SHQ1	YIL104C	RVS161	P25343	265 aa	Known RBP	3.09	□□□□□ -1.91
SHQ1	YIL104C	LDB16	P25587	256 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	PMT2	P31382	759 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	SSH4	P32343	579 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	ORC2	P32833	620 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	MSN2	P33748	704 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	GLG1	P36143	616 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	RIB1	P38066	345 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	FES1	P38260	290 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	OM14	P38325	134 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	MSS4	P38994	779 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	DSS1	P39112	969 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	GID8	P40208	455 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	TIM54	P47045	478 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	ASK10	P48361	1146 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	TOS2	P50078	622 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	MRK1	P50873	501 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	YGR067C	P53243	804 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	SYF2	P53277	215 aa	Predicted RBP	3.09	□□□□□ -1.91
SHQ1	YIL104C	GPI1	P53306	609 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	MTQ1	P53944	314 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	SNP1	Q00916	300 aa	Predicted RBP	3.09	□□□□□ -1.91
SHQ1	YIL104C	MMT1	Q03218	510 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	GAD1	Q04792	585 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	DAL4	Q04895	635 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	MDM30	Q05930	598 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	SSQ1	Q05931	657 aa	Predicted RBP	3.09	□□□□□ -1.91
SHQ1	YIL104C	BCP1	Q06338	283 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	YLR036C	Q07986	203 aa		3.09	□□□□□ -1.91
SHQ1	YIL104C	RPS21B	Q3E754	87 aa	Known RBP	3.09	□□□□□ -1.91
SHQ1	YIL104C	TIM9	O74700	87 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	PUT2	P07275	575 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	YAK1	P14680	807 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	CBS2	P14905	389 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	THR1	P17423	357 aa	Known RBP	3.09	□□□□□ -1.92
SHQ1	YIL104C	GLK1	P17709	500 aa	Known RBP	3.09	□□□□□ -1.92
SHQ1	YIL104C	RPB5	P20434	215 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	REC107	P21651	314 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	ADH7	P25377	361 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	CPR3	P25719	182 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	YJU2	P28320	278 aa	Predicted RBP	3.09	□□□□□ -1.92
SHQ1	YIL104C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.92	not detected
SHQ1	YIL104C	NTG1	P31378	399 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	ARP2	P32381	391 aa	Known RBP	3.09	□□□□□ -1.92
SHQ1	YIL104C	HSP150	P32478	413 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	SSE1	P32589	693 aa	Known RBP	3.09	□□□□□ -1.92
SHQ1	YIL104C	SWH1	P35845	1188 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	ALG3	P38179	458 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	TSL1	P38427	1098 aa	Known RBP	3.09	□□□□□ -1.92
SHQ1	YIL104C	VPS52	P39904	641 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	SER3	P40054	469 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	PHB1	P40961	287 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	CUP9	P41817	306 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	YFR054C	P43622	192 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	SEH1	P53011	349 aa	Known RBP	3.09	□□□□□ -1.92
SHQ1	YIL104C	YKU80	Q04437	629 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	SPC2	Q04969	178 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	RNH202	Q05635	350 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	GMC2	Q06201	188 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	RRP15	Q06511	250 aa	Predicted RBP	3.09	□□□□□ -1.92
SHQ1	YIL104C	NOP12	Q08208	459 aa	Known RBP	3.09	□□□□□ -1.92
SHQ1	YIL104C	THP1	Q08231	455 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	GPN2	Q08726	347 aa	Predicted RBP	3.09	□□□□□ -1.92
SHQ1	YIL104C	YOR365C	Q08844	703 aa		3.09	□□□□□ -1.92
SHQ1	YIL104C	THP2	O13539	261 aa	Known RBP	3.08	□□□□□ -1.92
SHQ1	YIL104C	YPT1	P01123	206 aa	Known RBP	3.08	□□□□□ -1.92
SHQ1	YIL104C	SIR3	P06701	978 aa		3.08	□□□□□ -1.92
SHQ1	YIL104C	RAD7	P06779	565 aa		3.08	□□□□□ -1.92
SHQ1	YIL104C	ADE5,7	P07244	802 aa	Known RBP	3.08	□□□□□ -1.92
SHQ1	YIL104C	RPC40	P07703	335 aa	Known RBP	3.08	□□□□□ -1.92
SHQ1	YIL104C	MSS18	P08593	268 aa		3.08	□□□□□ -1.92
SHQ1	YIL104C	ZWF1	P11412	505 aa	Known RBP	3.08	□□□□□ -1.92
SHQ1	YIL104C	CBS1	P14066	229 aa		3.08	□□□□□ -1.92
SHQ1	YIL104C	CMK2	P22517	447 aa		3.08	□□□□□ -1.92
SHQ1	YIL104C	YCR100C	P25606	316 aa		3.08	□□□□□ -1.92
SHQ1	YIL104C	ATP7	P30902	174 aa		3.08	□□□□□ -1.92
SHQ1	YIL104C	AST1	P35183	429 aa		3.08	□□□□□ -1.92
SHQ1	YIL104C	YBR241C	P38142	488 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms