RNA–Protein interactions for RNA: YDR340W

YDR340W, Transcript of Putative protein of unknown function, yeastyeast

Gene YDR340W, Length 303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR340WYDR340W PSA1P41940 361 aaKnown RBP3.2□□□□□ -1.9
YDR340WYDR340W SFH5P47008 294 aa3.2□□□□□ -1.9
YDR340WYDR340W MDV1P47025 714 aa3.2□□□□□ -1.9
YDR340WYDR340W STP1Q00947 519 aa3.2□□□□□ -1.9
YDR340WYDR340W PIR3Q03180 325 aa3.2□□□□□ -1.9
YDR340WYDR340W SHS1Q07657 551 aa3.2□□□□□ -1.9
YDR340WYDR340W AFT2Q08957 416 aa3.2□□□□□ -1.9
YDR340WYDR340W RPL24AP04449 155 aaKnown RBP3.19□□□□□ -1.9
YDR340WYDR340W RAD7P06779 565 aa3.19□□□□□ -1.9
YDR340WYDR340W SSC1P0CS90 654 aaKnown RBP3.19□□□□□ -1.9
YDR340WYDR340W CAP2P13517 287 aa3.19□□□□□ -1.9
YDR340WYDR340W CDC42P19073 191 aa3.19□□□□□ -1.9
YDR340WYDR340W UTR1P21373 530 aa3.19□□□□□ -1.9
YDR340WYDR340W EXG1P23776 448 aaKnown RBP3.19□□□□□ -1.9
YDR340WYDR340W NTG1P31378 399 aa3.19□□□□□ -1.9
YDR340WYDR340W YKL162CP36052 402 aa3.19□□□□□ -1.9
YDR340WYDR340W IML3P38265 245 aa3.19□□□□□ -1.9
YDR340WYDR340W ATG7P38862 630 aa3.19□□□□□ -1.9
YDR340WYDR340W CCT4P39078 528 aaKnown RBP3.19□□□□□ -1.9
YDR340WYDR340W XBP1P40489 647 aa3.19□□□□□ -1.9
YDR340WYDR340W RRT5P43607 289 aa3.19□□□□□ -1.9
YDR340WYDR340W NAS6P50086 228 aa3.19□□□□□ -1.9
YDR340WYDR340W RIM13Q03792 727 aa3.19□□□□□ -1.9
YDR340WYDR340W RVB1Q03940 463 aaKnown RBP3.19□□□□□ -1.9
YDR340WYDR340W YLR173WQ06247 608 aa3.19□□□□□ -1.9
YDR340WYDR340W BCP1Q06338 283 aa3.19□□□□□ -1.9
YDR340WYDR340W SAM4Q08985 325 aaKnown RBP3.19□□□□□ -1.9
YDR340WYDR340W AHC1Q12433 566 aa3.19□□□□□ -1.9
YDR340WYDR340W PAB1P04147 577 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
YDR340WYDR340W RAD1P06777 1100 aa3.18□□□□□ -1.9
YDR340WYDR340W ARF2P19146 181 aaKnown RBP3.18□□□□□ -1.9
YDR340WYDR340W YCP4P25349 247 aaKnown RBP3.18□□□□□ -1.9
YDR340WYDR340W RPL5P26321 297 aaKnown RBP3.18□□□□□ -1.9
YDR340WYDR340W NDC1P32500 655 aa3.18□□□□□ -1.9
YDR340WYDR340W GPX2P38143 162 aa3.18□□□□□ -1.9
YDR340WYDR340W RIB5P38145 238 aa3.18□□□□□ -1.9
YDR340WYDR340W CHK1P38147 527 aa3.18□□□□□ -1.9
YDR340WYDR340W PEX32P38292 413 aa3.18□□□□□ -1.9
YDR340WYDR340W YHK8P38776 514 aa3.18□□□□□ -1.9
YDR340WYDR340W RBG1P39729 369 aa3.18□□□□□ -1.9
YDR340WYDR340W ALG8P40351 577 aa3.18□□□□□ -1.9
YDR340WYDR340W ABM1P47146 123 aa3.18□□□□□ -1.9
YDR340WYDR340W TAF6P53040 516 aa3.18□□□□□ -1.9
YDR340WYDR340W LST7P53237 242 aa3.18□□□□□ -1.9
YDR340WYDR340W TRM112P53738 135 aaPredicted RBP3.18□□□□□ -1.9
YDR340WYDR340W YNL134CP53912 376 aaKnown RBP3.18□□□□□ -1.9
YDR340WYDR340W DIG1Q03063 452 aaKnown RBP3.18□□□□□ -1.9
YDR340WYDR340W HER2Q03557 464 aa3.18□□□□□ -1.9
YDR340WYDR340W BCH1Q05029 724 aa3.18□□□□□ -1.9
YDR340WYDR340W SNX3Q08826 162 aaKnown RBP3.18□□□□□ -1.9
YDR340WYDR340W RBD2Q12270 262 aa3.18□□□□□ -1.9
YDR340WYDR340W MED4Q12343 284 aa3.18□□□□□ -1.9
YDR340WYDR340W MTF1P14908 341 aaKnown RBP3.17□□□□□ -1.9
YDR340WYDR340W FAR1P21268 830 aa3.17□□□□□ -1.9
YDR340WYDR340W TIR2P33890 251 aa3.17□□□□□ -1.9
YDR340WYDR340W IST2P38250 946 aa3.17□□□□□ -1.9
YDR340WYDR340W YHR182WP38870 785 aa3.17□□□□□ -1.9
YDR340WYDR340W OST1P41543 476 aaKnown RBP3.17□□□□□ -1.9
YDR340WYDR340W DIM1P41819 318 aaKnown RBP3.17□□□□□ -1.9
YDR340WYDR340W PXR1P53335 271 aaPredicted RBP3.17□□□□□ -1.9
YDR340WYDR340W YMR181CQ03231 154 aa3.17□□□□□ -1.9
YDR340WYDR340W THI7Q05998 598 aa3.17□□□□□ -1.9
YDR340WYDR340W GAT3Q07928 141 aa3.17□□□□□ -1.9
YDR340WYDR340W RAX1Q08760 435 aa3.17□□□□□ -1.9
YDR340WYDR340W SLF1Q12034 447 aaKnown RBP3.17□□□□□ -1.9
YDR340WYDR340W BTS1Q12051 335 aa3.17□□□□□ -1.9
YDR340WYDR340W PRP46Q12417 451 aaPredicted RBP3.17□□□□□ -1.9
YDR340WYDR340W DET1Q99288 334 aaKnown RBP3.17□□□□□ -1.9
YDR340WYDR340W YFL068WP0CX99 160 aa3.16□□□□□ -1.9
YDR340WYDR340W YLL066W-AP0CY00 160 aa3.16□□□□□ -1.9
YDR340WYDR340W YLL067W-AP0CY01 160 aa3.16□□□□□ -1.9
YDR340WYDR340W DAL2P25335 343 aa3.16□□□□□ -1.9
YDR340WYDR340W TMT1P32643 299 aa3.16□□□□□ -1.9
YDR340WYDR340W MTC4P38335 694 aaKnown RBP3.16□□□□□ -1.9
YDR340WYDR340W MMS21P38632 267 aa3.16□□□□□ -1.9
YDR340WYDR340W YHR045WP38775 560 aa3.16□□□□□ -1.9
YDR340WYDR340W FHL1P39521 936 aa3.16□□□□□ -1.9
YDR340WYDR340W INA22P40576 216 aa3.16□□□□□ -1.9
YDR340WYDR340W KEG1P43614 200 aa3.16□□□□□ -1.9
YDR340WYDR340W FMP33P46998 180 aa3.16□□□□□ -1.9
YDR340WYDR340W CAF40P53829 373 aa3.16□□□□□ -1.9
YDR340WYDR340W GOR1P53839 350 aa3.16□□□□□ -1.9
YDR340WYDR340W RPM2Q02773 1202 aa3.16□□□□□ -1.9
YDR340WYDR340W YMR102CQ03177 834 aa3.16□□□□□ -1.9
YDR340WYDR340W BOP2Q06150 570 aa3.16□□□□□ -1.9
YDR340WYDR340W GPN3Q06543 272 aa3.16□□□□□ -1.9
YDR340WYDR340W DSE3Q08729 430 aa3.16□□□□□ -1.9
YDR340WYDR340W YPQ1Q12010 308 aa3.16□□□□□ -1.9
YDR340WYDR340W SIA1Q12212 622 aa3.16□□□□□ -1.9
YDR340WYDR340W SET6Q12529 373 aa3.16□□□□□ -1.9
YDR340WYDR340W RRP12Q12754 1228 aaKnown RBP3.16□□□□□ -1.9
YDR340WYDR340W RBK1P25332 333 aa3.15□□□□□ -1.91
YDR340WYDR340W SPS22P25380 463 aa3.15□□□□□ -1.91
YDR340WYDR340W POP5P28005 173 aa3.15□□□□□ -1.91
YDR340WYDR340W MKK1P32490 508 aa3.15□□□□□ -1.91
YDR340WYDR340W IMP3P32899 183 aaPredicted RBP3.15□□□□□ -1.91
YDR340WYDR340W SKG6P32900 734 aaPredicted RBP3.15□□□□□ -1.91
YDR340WYDR340W PMU1P36069 295 aa3.15□□□□□ -1.91
YDR340WYDR340W NAT2P37293 288 aa3.15□□□□□ -1.91
YDR340WYDR340W HIS2P38635 335 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms