RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W RPN9Q04062 393 aaKnown RBP2.34□□□□□ -2.04
SSF2YDR312W URH1Q04179 340 aa2.34□□□□□ -2.04
SSF2YDR312W MTR10Q99189 972 aa2.34□□□□□ -2.04
SSF2YDR312W SEN1Q00416 2231 aaKnown RBP2.33□□□□□ -2.04
SSF2YDR312W UTP10P42945 1769 aaKnown RBP2.33□□□□□ -2.04
SSF2YDR312W HOM3P10869 527 aa2.33□□□□□ -2.04
SSF2YDR312W POT1P27796 417 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
SSF2YDR312W PUP2P32379 260 aa2.33□□□□□ -2.04
SSF2YDR312W CSE2P33308 149 aa2.33□□□□□ -2.04
SSF2YDR312W BLI1P35727 113 aa2.33□□□□□ -2.04
SSF2YDR312W JEM1P40358 645 aa2.33□□□□□ -2.04
SSF2YDR312W VHS2P40463 436 aa2.33□□□□□ -2.04
SSF2YDR312W SIM1P40472 476 aa2.33□□□□□ -2.04
SSF2YDR312W YPS6P40583 537 aa2.33□□□□□ -2.04
SSF2YDR312W BRO1P48582 844 aa2.33□□□□□ -2.04
SSF2YDR312W YNL050CP53952 270 aa2.33□□□□□ -2.04
SSF2YDR312W YLR152CP54072 576 aa2.33□□□□□ -2.04
SSF2YDR312W NUP116Q02630 1113 aa2.33□□□□□ -2.04
SSF2YDR312W PEX25Q02969 394 aa2.33□□□□□ -2.04
SSF2YDR312W YKL097CP34245 136 aa2.32□□□□□ -2.04
SSF2YDR312W YBR056WP38081 501 aa2.32□□□□□ -2.04
SSF2YDR312W CHK1P38147 527 aa2.32□□□□□ -2.04
SSF2YDR312W ZTA1P38230 334 aaKnown RBP2.32□□□□□ -2.04
SSF2YDR312W SBE22P38814 852 aa2.32□□□□□ -2.04
SSF2YDR312W GDI1P39958 451 aaKnown RBP2.32□□□□□ -2.04
SSF2YDR312W GAT2P40209 560 aa2.32□□□□□ -2.04
SSF2YDR312W YJL055WP47044 245 aa2.32□□□□□ -2.04
SSF2YDR312W RRP9Q06506 573 aaKnown RBP2.32□□□□□ -2.04
SSF2YDR312W DCI1Q08558 271 aa2.32□□□□□ -2.04
SSF2YDR312W TPT1Q12272 230 aaKnown RBP2.32□□□□□ -2.04
SSF2YDR312W CEX1Q12453 761 aa2.32□□□□□ -2.04
SSF2YDR312W SOD1P00445 154 aaKnown RBP2.31□□□□□ -2.04
SSF2YDR312W YCL068CP25593 260 aa2.31□□□□□ -2.04
SSF2YDR312W MDL1P33310 695 aa2.31□□□□□ -2.04
SSF2YDR312W RRP1P35178 278 aaPredicted RBP2.31□□□□□ -2.04
SSF2YDR312W MRPL10P36520 322 aa2.31□□□□□ -2.04
SSF2YDR312W STP2P38704 541 aa2.31□□□□□ -2.04
SSF2YDR312W CHS6P40955 746 aa2.31□□□□□ -2.04
SSF2YDR312W MPP10P47083 593 aaKnown RBP2.31□□□□□ -2.04
SSF2YDR312W YJR085CP47131 105 aaKnown RBP2.31□□□□□ -2.04
SSF2YDR312W STD1Q02794 444 aa2.31□□□□□ -2.04
SSF2YDR312W CCE1Q03702 353 aa2.31□□□□□ -2.04
SSF2YDR312W NDL1Q06568 189 aa2.31□□□□□ -2.04
SSF2YDR312W RAX1Q08760 435 aa2.31□□□□□ -2.04
SSF2YDR312W SPE3Q12074 293 aaKnown RBP2.31□□□□□ -2.04
SSF2YDR312W WTM1Q12363 437 aaKnown RBP2.31□□□□□ -2.04
SSF2YDR312W SAC3P46674 1301 aa2.3□□□□□ -2.04
SSF2YDR312W PHA2P32452 334 aa2.3□□□□□ -2.04
SSF2YDR312W CYS4P32582 507 aaKnown RBP2.3□□□□□ -2.04
SSF2YDR312W PRS1P32895 427 aaKnown RBP2.3□□□□□ -2.04
SSF2YDR312W MDE1P47095 244 aa2.3□□□□□ -2.04
SSF2YDR312W MMT1Q03218 510 aa2.3□□□□□ -2.04
SSF2YDR312W YDR341CQ05506 607 aaKnown RBP2.3□□□□□ -2.04
SSF2YDR312W YLR456WQ06199 204 aa2.3□□□□□ -2.04
SSF2YDR312W NSE1Q07913 336 aa2.3□□□□□ -2.04
SSF2YDR312W IRC25Q07951 179 aa2.3□□□□□ -2.04
SSF2YDR312W UAF30Q08747 228 aa2.3□□□□□ -2.04
SSF2YDR312W GPM3Q12326 303 aa2.3□□□□□ -2.04
SSF2YDR312W SNU66Q12420 587 aaPredicted RBP2.3□□□□□ -2.04
SSF2YDR312W SKS1Q12505 502 aa2.3□□□□□ -2.04
SSF2YDR312W RPP0P05317 312 aaKnown RBP2.29□□□□□ -2.04
SSF2YDR312W RPL6BP05739 176 aaKnown RBP2.29□□□□□ -2.04
SSF2YDR312W NAT1P12945 854 aaKnown RBP2.29□□□□□ -2.04
SSF2YDR312W POX1P13711 748 aa2.29□□□□□ -2.04
SSF2YDR312W RIM1P32445 135 aaKnown RBP2.29□□□□□ -2.04
SSF2YDR312W PTK1P36002 662 aaPredicted RBP2.29□□□□□ -2.04
SSF2YDR312W FAD1P38913 306 aa2.29□□□□□ -2.04
SSF2YDR312W STN1P38960 494 aa2.29□□□□□ -2.04
SSF2YDR312W YER079WP40052 210 aaKnown RBP2.29□□□□□ -2.04
SSF2YDR312W YIL029CP40538 142 aa2.29□□□□□ -2.04
SSF2YDR312W SHY1P53266 389 aa2.29□□□□□ -2.04
SSF2YDR312W RPL6AQ02326 176 aaKnown RBP2.29□□□□□ -2.04
SSF2YDR312W PRP3Q03338 469 aaPredicted RBP2.29□□□□□ -2.04
SSF2YDR312W YMR027WQ04371 470 aa2.29□□□□□ -2.04
SSF2YDR312W NDE2Q07500 545 aa2.29□□□□□ -2.04
SSF2YDR312W NCA2Q12374 616 aa2.29□□□□□ -2.04
SSF2YDR312W IZH2Q12442 317 aa2.29□□□□□ -2.04
SSF2YDR312W SRN2Q99176 213 aa2.29□□□□□ -2.04
SSF2YDR312W DST1P07273 309 aa2.28□□□□□ -2.04
SSF2YDR312W NAM2P11325 894 aa2.28□□□□□ -2.04
SSF2YDR312W CAP2P13517 287 aa2.28□□□□□ -2.04
SSF2YDR312W EXG1P23776 448 aaKnown RBP2.28□□□□□ -2.04
SSF2YDR312W MNE1P24720 663 aa2.28□□□□□ -2.04
SSF2YDR312W ATP3P38077 311 aaKnown RBP2.28□□□□□ -2.04
SSF2YDR312W GPI16P38875 610 aa2.28□□□□□ -2.04
SSF2YDR312W TVP23P38962 199 aa2.28□□□□□ -2.04
SSF2YDR312W ALD5P40047 520 aaKnown RBP2.28□□□□□ -2.04
SSF2YDR312W SEC28P40509 296 aaKnown RBP2.28□□□□□ -2.04
SSF2YDR312W TOS3P43637 560 aa2.28□□□□□ -2.04
SSF2YDR312W MRM2P53123 320 aa2.28□□□□□ -2.04
SSF2YDR312W MLC1P53141 149 aa2.28□□□□□ -2.04
SSF2YDR312W COS1P53822 381 aa2.28□□□□□ -2.04
SSF2YDR312W EOS1P53938 366 aa2.28□□□□□ -2.04
SSF2YDR312W MTQ1P53944 314 aa2.28□□□□□ -2.04
SSF2YDR312W YDR541CQ03049 344 aa2.28□□□□□ -2.04
SSF2YDR312W GYL1Q04322 720 aa2.28□□□□□ -2.04
SSF2YDR312W INM2Q05533 292 aa2.28□□□□□ -2.04
SSF2YDR312W MDM36Q06820 579 aa2.28□□□□□ -2.04
SSF2YDR312W RPN5Q12250 445 aaKnown RBP2.28□□□□□ -2.04
SSF2YDR312W PDE2P06776 526 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms