RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	MGR1	P25573	417 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	PRR1	P28708	518 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	BRF1	P29056	596 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	AFG1	P32317	509 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	RML2	P32611	393 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	TFB1	P32776	642 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	FRE1	P32791	686 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	REC114	P32841	428 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	ATO2	P32907	282 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	AST1	P35183	429 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	NTC20	P38302	140 aa	Predicted RBP	4.09	□□□□□ -1.75
SHE1	YBL031W	YIL152W	P40455	235 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	VMA13	P41807	478 aa	Known RBP	4.09	□□□□□ -1.75
SHE1	YBL031W	RBL2	P48606	106 aa	Known RBP	4.09	□□□□□ -1.75
SHE1	YBL031W	RMD9	P53140	646 aa	Known RBP	4.09	□□□□□ -1.75
SHE1	YBL031W	NOP19	P53317	196 aa	Predicted RBP	4.09	□□□□□ -1.75
SHE1	YBL031W	CUS2	P53830	285 aa	Predicted RBP	4.09	□□□□□ -1.75
SHE1	YBL031W	ENT5	Q03769	411 aa	Known RBP	4.09	□□□□□ -1.75
SHE1	YBL031W	SPC2	Q04969	178 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	YMR226C	Q05016	267 aa	Known RBP	4.09	□□□□□ -1.75
SHE1	YBL031W	GLO2	Q05584	274 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	CDC123	Q05791	360 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	DIC1	Q06143	298 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	YOL019W	Q08157	551 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	DIS3	Q08162	1001 aa	Known RBP	4.09	□□□□□ -1.75
SHE1	YBL031W	DNL4	Q08387	944 aa	Predicted RBP	4.09	□□□□□ -1.75
SHE1	YBL031W	UAF30	Q08747	228 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	YPR202W	Q08993	238 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	MSH5	Q12175	901 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	EMP46	Q12396	444 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	CTF3	Q12748	733 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	ISN1	Q99312	450 aa		4.09	□□□□□ -1.75
SHE1	YBL031W	GLN3	P18494	730 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	PPH22	P23595	377 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	RPS5	P26783	225 aa	Known RBP	4.08	□□□□□ -1.76
SHE1	YBL031W	PHO91	P27514	894 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	ZIP1	P31111	875 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	VPS17	P32913	551 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	SIP2	P34164	415 aa	Known RBP	4.08	□□□□□ -1.76
SHE1	YBL031W	ECM15	P35195	104 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	YNK1	P36010	153 aa	Known RBP	4.08	□□□□□ -1.76
SHE1	YBL031W	CBP4	P37267	147 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	ARA1	P38115	344 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	TRM5	P38793	499 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	MEP1	P40260	492 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	CAK1	P43568	368 aa	Predicted RBP	4.08	□□□□□ -1.76
SHE1	YBL031W	GCD14	P46959	383 aa	Predicted RBP	4.08	□□□□□ -1.76
SHE1	YBL031W	YGR016W	P53209	190 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	SAM50	P53969	484 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	RCF1	Q03713	159 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	MUM3	Q08750	479 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	VPS54	Q12071	889 aa		4.08	□□□□□ -1.76
SHE1	YBL031W	PMD1	P32634	1753 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	YFL068W	P0CX99	160 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	YLL066W-A	P0CY00	160 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	YLL067W-A	P0CY01	160 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	ATR1	P13090	542 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	POX1	P13711	748 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SHE1	YBL031W	CPR2	P23285	205 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	SGV1	P23293	657 aa	Known RBP	4.07	□□□□□ -1.76
SHE1	YBL031W	AAT2	P23542	418 aa	Known RBP	4.07	□□□□□ -1.76
SHE1	YBL031W	YCL068C	P25593	260 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	YIM1	P28625	365 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	AEP1	P32493	518 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	CYM1	P32898	989 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	UTP11	P34247	250 aa	Predicted RBP	4.07	□□□□□ -1.76
SHE1	YBL031W	VPS21	P36017	210 aa	Known RBP	4.07	□□□□□ -1.76
SHE1	YBL031W	APE3	P37302	537 aa	Known RBP	4.07	□□□□□ -1.76
SHE1	YBL031W	YBR241C	P38142	488 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	LRP1	P38801	184 aa	Known RBP	4.07	□□□□□ -1.76
SHE1	YBL031W	YAT2	P40017	923 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	YER186C	P40101	306 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	SNL1	P40548	159 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	AGP3	P43548	558 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	RPS0B	P46654	252 aa	Known RBP	4.07	□□□□□ -1.76
SHE1	YBL031W	GUF1	P46943	645 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	SHE4	P51534	789 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	SCS3	P53012	380 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	YGL039W	P53183	348 aa	Known RBP	4.07	□□□□□ -1.76
SHE1	YBL031W	PRO2	P54885	456 aa	Known RBP	4.07	□□□□□ -1.76
SHE1	YBL031W	CDC14	Q00684	551 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	SKO1	Q02100	647 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	RPM2	Q02773	1202 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	YDR476C	Q03362	224 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	YDR415C	Q04033	374 aa	Predicted RBP	4.07	□□□□□ -1.76
SHE1	YBL031W	AIM32	Q04689	311 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	YMR321C	Q04898	105 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	DYN3	Q04949	312 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	YDR278C	Q05612	105 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	ATG38	Q05789	226 aa	Known RBP	4.07	□□□□□ -1.76
SHE1	YBL031W	GMC2	Q06201	188 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	SEC10	Q06245	871 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	YLR413W	Q06689	675 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	BSC1	Q12140	328 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	HSP42	Q12329	375 aa		4.07	□□□□□ -1.76
SHE1	YBL031W	HIS1	P00498	297 aa	Known RBP	4.06	□□□□□ -1.76
SHE1	YBL031W	RSR1	P13856	272 aa		4.06	□□□□□ -1.76
SHE1	YBL031W	FBA1	P14540	359 aa	Known RBP	4.06	□□□□□ -1.76
SHE1	YBL031W	YAK1	P14680	807 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms