RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 RTKN2Q8IZC4 609 aa2.29□□□□□ -2.04
CEP290-208ENST00000604024 CALML6Q8TD86 181 aa2.29□□□□□ -2.04
CEP290-208ENST00000604024 PLEKHG4BQ96PX9 1271 aa2.29□□□□□ -2.04
CEP290-208ENST00000604024 MMRN2Q9H8L6 949 aa2.29□□□□□ -2.04
CEP290-208ENST00000604024 CAPN14A8MX76 684 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 ARVCFO00192 962 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 PRODHO43272 600 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 GJB6O95452 261 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 MPIG6BO95866 241 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 CD38P28907 300 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 SUMO1P63165 101 aaKnown RBP2.28□□□□□ -2.04
CEP290-208ENST00000604024 BLOC1S1P78537 153 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 SMAD3P84022 425 aaKnown RBP2.28□□□□□ -2.04
CEP290-208ENST00000604024 MAP3K12Q12852 859 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 PCOLCEQ15113 449 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 NTRK3Q16288 839 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 KANK2Q63ZY3 851 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 Q6ZPA2 131 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 SHCBP1Q8NEM2 672 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 SH3RF2Q8TEC5 729 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 THAP3Q8WTV1 239 aaPredicted RBP2.28□□□□□ -2.04
CEP290-208ENST00000604024 DLG3Q92796 817 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 NELL1Q92832 810 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 IER2Q9BTL4 223 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 CLCA2Q9UQC9 943 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 R3HCC1Q9Y3T6 440 aaKnown RBP2.28□□□□□ -2.04
CEP290-208ENST00000604024 CTDP1Q9Y5B0 961 aaPredicted RBP2.28□□□□□ -2.04
CEP290-208ENST00000604024 CCDC163A0A0D9SF12 145 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 ESYT3A0FGR9 886 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 TRIM24O15164 1050 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 NKRFO15226 690 aaKnown RBP eCLIP2.28□□□□□ -2.04
CEP290-208ENST00000604024 MTSS1O43312 755 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 GCP02774 474 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 HMGCRP04035 888 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 MAN2A2P49641 1150 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 SF1Q15637 639 aaKnown RBP2.28□□□□□ -2.04
CEP290-208ENST00000604024 CRY1Q16526 586 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 PRSS53Q2L4Q9 553 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 DCAF17Q5H9S7 520 aaPredicted RBP2.28□□□□□ -2.04
CEP290-208ENST00000604024 LARP1BQ659C4 914 aaKnown RBP2.28□□□□□ -2.04
CEP290-208ENST00000604024 HAS1Q92839 578 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 OR14A2Q96R54 314 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 GMLQ99445 158 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 PDCD2LQ9BRP1 358 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 OR10A5Q9H207 317 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 IPPKQ9H8X2 491 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 BTBD7Q9P203 1132 aa2.28□□□□□ -2.04
CEP290-208ENST00000604024 COL4A3Q01955 1670 aa2.28□□□□□ -2.05
CEP290-208ENST00000604024 A0A0A6YYK5 440 aaPredicted RBP2.27□□□□□ -2.05
CEP290-208ENST00000604024 GOLGA6L6A8MZA4 724 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 INO80B-WBP1J3KQ70 363 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 DGCR2P98153 550 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 CNGB1Q14028 1251 aaPredicted RBP2.27□□□□□ -2.05
CEP290-208ENST00000604024 FAM47CQ5HY64 1035 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 LY6G5CQ5SRR4 150 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 LAIR1Q6GTX8 287 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 MRM1Q6IN84 353 aaKnown RBP2.27□□□□□ -2.05
CEP290-208ENST00000604024 EP400NLQ6ZTU2 488 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 LARP4Q71RC2 724 aaKnown RBP eCLIP2.27□□□□□ -2.05
CEP290-208ENST00000604024 GPR155Q7Z3F1 870 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 ZNF764Q96H86 408 aaPredicted RBP2.27□□□□□ -2.05
CEP290-208ENST00000604024 INO80BQ9C086 356 aaPredicted RBP2.27□□□□□ -2.05
CEP290-208ENST00000604024 HECAQ9UBI9 543 aaPredicted RBP2.27□□□□□ -2.05
CEP290-208ENST00000604024 PPARGC1AQ9UBK2 798 aaKnown RBP2.27□□□□□ -2.05
CEP290-208ENST00000604024 ZNF561-AS1K7EIQ3 104 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 MAN2B1O00754 1011 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 EFCAB14O75071 495 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 COL6A2P12110 1019 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 PTPN1P18031 435 aaKnown RBP2.27□□□□□ -2.05
CEP290-208ENST00000604024 APEX1P27695 318 aaKnown RBP2.27□□□□□ -2.05
CEP290-208ENST00000604024 FNTBP49356 437 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 KRTAP10-11P60412 298 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 GABREP78334 506 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 IL13RA1P78552 427 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 COL10A1Q03692 680 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 ARHGAP44Q17R89 818 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 GRAMD4Q6IC98 578 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 CC2D1AQ6P1N0 951 aaPredicted RBP2.27□□□□□ -2.05
CEP290-208ENST00000604024 LRP10Q7Z4F1 713 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 GPR135Q8IZ08 494 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 SYNE4Q8N205 404 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 SLC9A6Q92581 669 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 PTPRN2Q92932 1015 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 FOXB1Q99853 325 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 CCDC113Q9H0I3 377 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 SLC39A2Q9NP94 309 aa2.27□□□□□ -2.05
CEP290-208ENST00000604024 SAE1Q9UBE0 346 aaPredicted RBP2.27□□□□□ -2.05
CEP290-208ENST00000604024 FAM90A27PA6NNH2 459 aa2.26□□□□□ -2.05
CEP290-208ENST00000604024 MRE11P49959 708 aa2.26□□□□□ -2.05
CEP290-208ENST00000604024 MOGSQ13724 837 aa2.26□□□□□ -2.05
CEP290-208ENST00000604024 DDR2Q16832 855 aa2.26□□□□□ -2.05
CEP290-208ENST00000604024 CLIP3Q96DZ5 547 aa2.26□□□□□ -2.05
CEP290-208ENST00000604024 C16orf92Q96LL3 132 aa2.26□□□□□ -2.05
CEP290-208ENST00000604024 SPATA9Q9BWV2 254 aa2.26□□□□□ -2.05
CEP290-208ENST00000604024 OSBPL6Q9BZF3 934 aa2.26□□□□□ -2.05
CEP290-208ENST00000604024 ARHGEF4Q9NR80 690 aa2.26□□□□□ -2.05
CEP290-208ENST00000604024 KCNH7Q9NS40 1196 aa2.26□□□□□ -2.05
CEP290-208ENST00000604024 RBPJLQ9UBG7 517 aa2.26□□□□□ -2.05
CEP290-208ENST00000604024 TRPS1Q9UHF7 1281 aa2.26□□□□□ -2.05
CEP290-208ENST00000604024 PTPN22Q9Y2R2 807 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms