RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 ZNF862O60290 1169 aa18.73■□□□□ 0.59
SREBF1-219ENST00000580540 ARHGEF15O94989 841 aa18.73■□□□□ 0.59
SREBF1-219ENST00000580540 OATP04181 439 aa18.73■□□□□ 0.59
SREBF1-219ENST00000580540 CD52P31358 61 aa18.73■□□□□ 0.59
SREBF1-219ENST00000580540 TAP1Q03518 808 aa18.73■□□□□ 0.59
SREBF1-219ENST00000580540 SAFBQ15424 915 aaKnown RBP eCLIP18.73■□□□□ 0.59
SREBF1-219ENST00000580540 PPP4R3AQ6IN85 833 aa18.73■□□□□ 0.59
SREBF1-219ENST00000580540 FAM184AQ8NB25 1140 aa18.73■□□□□ 0.59
SREBF1-219ENST00000580540 RDM1Q8NG50 284 aa18.73■□□□□ 0.59
SREBF1-219ENST00000580540 ARNTL2Q8WYA1 636 aa18.73■□□□□ 0.59
SREBF1-219ENST00000580540 C8orf76Q96K31 380 aa18.73■□□□□ 0.59
SREBF1-219ENST00000580540 LLPHQ9BRT6 129 aaKnown RBP18.73■□□□□ 0.59
SREBF1-219ENST00000580540 PTPRSQ13332 1948 aa18.72■□□□□ 0.59
SREBF1-219ENST00000580540 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.72■□□□□ 0.59
SREBF1-219ENST00000580540 RFXAPO00287 272 aa18.72■□□□□ 0.59
SREBF1-219ENST00000580540 ST18O60284 1047 aa18.72■□□□□ 0.59
SREBF1-219ENST00000580540 C22orf31O95567 290 aa18.72■□□□□ 0.59
SREBF1-219ENST00000580540 ATP2B1P20020 1258 aa18.72■□□□□ 0.59
SREBF1-219ENST00000580540 TSHZ1Q6ZSZ6 1077 aa18.72■□□□□ 0.59
SREBF1-219ENST00000580540 POTEDQ86YR6 584 aa18.72■□□□□ 0.59
SREBF1-219ENST00000580540 KIAA0319LQ8IZA0 1049 aa18.72■□□□□ 0.59
SREBF1-219ENST00000580540 BANK1Q8NDB2 785 aa18.72■□□□□ 0.59
SREBF1-219ENST00000580540 TNFRSF25Q93038 417 aa18.72■□□□□ 0.59
SREBF1-219ENST00000580540 FAM20AQ96MK3 541 aa18.72■□□□□ 0.59
SREBF1-219ENST00000580540 AGO3Q9H9G7 860 aaKnown RBP18.72■□□□□ 0.59
SREBF1-219ENST00000580540 SEPT9Q9UHD8 586 aaPredicted RBP18.72■□□□□ 0.59
SREBF1-219ENST00000580540 COL6A3P12111 3177 aa18.72■□□□□ 0.59
SREBF1-219ENST00000580540 MICAL3Q7RTP6 2002 aa18.71■□□□□ 0.59
SREBF1-219ENST00000580540 EVPLQ92817 2033 aa18.71■□□□□ 0.59
SREBF1-219ENST00000580540 BAG4O95429 457 aaKnown RBP18.71■□□□□ 0.59
SREBF1-219ENST00000580540 CLCN3P51790 818 aa18.71■□□□□ 0.59
SREBF1-219ENST00000580540 ADGRE1Q14246 886 aa18.71■□□□□ 0.59
SREBF1-219ENST00000580540 EFCAB12Q6NXP0 572 aa18.71■□□□□ 0.59
SREBF1-219ENST00000580540 SUGCTQ9HAC7 445 aa18.71■□□□□ 0.59
SREBF1-219ENST00000580540 KCNMB3Q9NPA1 279 aa18.71■□□□□ 0.59
SREBF1-219ENST00000580540 MTUS1Q9ULD2 1270 aa18.71■□□□□ 0.59
SREBF1-219ENST00000580540 INSL6Q9Y581 213 aa18.71■□□□□ 0.59
SREBF1-219ENST00000580540 DDX11L8A8MPP1 907 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 EML1O00423 815 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 MAGEB2O15479 319 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 VTNP04004 478 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 IBSPP21815 317 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-219ENST00000580540 HMGN5P82970 282 aaKnown RBP18.7■□□□□ 0.58
SREBF1-219ENST00000580540 NFX1Q12986 1120 aaKnown RBP18.7■□□□□ 0.58
SREBF1-219ENST00000580540 PAK2Q13177 524 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 MKRN4PQ13434 485 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-219ENST00000580540 CCDC85BQ15834 202 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-219ENST00000580540 TMEM266Q2M3C6 531 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 MTERF2Q49AM1 385 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 NCAPH2Q6IBW4 605 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 B3GNT9Q6UX72 402 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 SPRED2Q7Z698 418 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 MICALL1Q8N3F8 863 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 LRRC71Q8N4P6 559 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 USP38Q8NB14 1042 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 HAS1Q92839 578 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 TOP1MTQ969P6 601 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 YME1L1Q96TA2 773 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 CDHR5Q9HBB8 845 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 VAV3Q9UKW4 847 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 PADI3Q9ULW8 664 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 AKT3Q9Y243 479 aa18.7■□□□□ 0.58
SREBF1-219ENST00000580540 TMEM150BA6NC51 233 aa18.69■□□□□ 0.58
SREBF1-219ENST00000580540 ENPP3O14638 875 aa18.69■□□□□ 0.58
SREBF1-219ENST00000580540 TBX3O15119 743 aa18.69■□□□□ 0.58
SREBF1-219ENST00000580540 TMOD1P28289 359 aa18.69■□□□□ 0.58
SREBF1-219ENST00000580540 TBC1D8BQ0IIM8 1120 aa18.69■□□□□ 0.58
SREBF1-219ENST00000580540 PPP2R5CQ13362 524 aa18.69■□□□□ 0.58
SREBF1-219ENST00000580540 GNL2Q13823 731 aaKnown RBP18.69■□□□□ 0.58
SREBF1-219ENST00000580540 KIZQ2M2Z5 673 aa18.69■□□□□ 0.58
SREBF1-219ENST00000580540 XKR3Q5GH77 459 aa18.69■□□□□ 0.58
SREBF1-219ENST00000580540 MAP7D2Q96T17 732 aa18.69■□□□□ 0.58
SREBF1-219ENST00000580540 SH2D3AQ9BRG2 576 aa18.69■□□□□ 0.58
SREBF1-219ENST00000580540 SQORQ9Y6N5 450 aa18.69■□□□□ 0.58
SREBF1-219ENST00000580540 SIP14410 1827 aa18.69■□□□□ 0.58
SREBF1-219ENST00000580540 WDR81Q562E7 1941 aa18.68■□□□□ 0.58
SREBF1-219ENST00000580540 EPOPA6NHQ4 379 aa18.68■□□□□ 0.58
SREBF1-219ENST00000580540 RPS6KA5O75582 802 aa18.68■□□□□ 0.58
SREBF1-219ENST00000580540 PSMC5P62195 406 aa18.68■□□□□ 0.58
SREBF1-219ENST00000580540 CALCRLQ16602 461 aa18.68■□□□□ 0.58
SREBF1-219ENST00000580540 SLFN12Q8IYM2 578 aa18.68■□□□□ 0.58
SREBF1-219ENST00000580540 ZNF668Q96K58 619 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-219ENST00000580540 OSMRQ99650 979 aa18.68■□□□□ 0.58
SREBF1-219ENST00000580540 NOC2LQ9Y3T9 749 aaKnown RBP18.68■□□□□ 0.58
SREBF1-219ENST00000580540 CHD9Q3L8U1 2897 aa18.68■□□□□ 0.58
SREBF1-219ENST00000580540 KDM3AQ9Y4C1 1321 aa18.68■□□□□ 0.58
SREBF1-219ENST00000580540 CDH23Q9H251 3354 aa18.68■□□□□ 0.58
SREBF1-219ENST00000580540 LOXHD1Q8IVV2 1947 aa18.67■□□□□ 0.58
SREBF1-219ENST00000580540 LINC01553A4QN01 128 aa18.67■□□□□ 0.58
SREBF1-219ENST00000580540 GTPBP6O43824 516 aaPredicted RBP18.67■□□□□ 0.58
SREBF1-219ENST00000580540 QARSP47897 775 aaKnown RBP18.67■□□□□ 0.58
SREBF1-219ENST00000580540 SCLT1Q96NL6 688 aa18.67■□□□□ 0.58
SREBF1-219ENST00000580540 TGS1Q96RS0 853 aaKnown RBP18.67■□□□□ 0.58
SREBF1-219ENST00000580540 FTHL17Q9BXU8 183 aa18.67■□□□□ 0.58
SREBF1-219ENST00000580540 WNT7AO00755 349 aa18.66■□□□□ 0.58
SREBF1-219ENST00000580540 NEMFO60524 1076 aa18.66■□□□□ 0.58
SREBF1-219ENST00000580540 DKC1O60832 514 aaKnown RBP eCLIP18.66■□□□□ 0.58
SREBF1-219ENST00000580540 P4HBP07237 508 aaKnown RBP18.66■□□□□ 0.58
SREBF1-219ENST00000580540 MCM7P33993 719 aa18.66■□□□□ 0.58
SREBF1-219ENST00000580540 TXKP42681 527 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms