RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 ADGRE1Q14246 886 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 NTRK3Q16288 839 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 PKN1Q16512 942 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 Q4G0T1 1027 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 EPC2Q52LR7 807 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 SPOUT1Q5T280 376 aaKnown RBP8.43□□□□□ -1.06
CPNE1-226ENST00000486021 PDE12Q6L8Q7 609 aaKnown RBP8.43□□□□□ -1.06
CPNE1-226ENST00000486021 TYW1BQ6NUM6 668 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 OTUD6AQ7L8S5 288 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 MIER3Q7Z3K6 550 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 SLFN12Q8IYM2 578 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 ABI1Q8IZP0 508 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 METTL13Q8N6R0 699 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 TBCKQ8TEA7 893 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 WNT8BQ93098 351 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 VWCEQ96DN2 955 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 FAM20AQ96MK3 541 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 NSUN3Q9H649 340 aaKnown RBP8.43□□□□□ -1.06
CPNE1-226ENST00000486021 BCAS3Q9H6U6 928 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 SUGCTQ9HAC7 445 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 DACT1Q9NYF0 836 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 VPS54Q9P1Q0 977 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 GABBR1Q9UBS5 961 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 AKT3Q9Y243 479 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 STK36Q9NRP7 1315 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 KIAA1671Q9BY89 1806 aa8.43□□□□□ -1.06
CPNE1-226ENST00000486021 IGLV3-22A0A075B6J6 115 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.42□□□□□ -1.06
CPNE1-226ENST00000486021 FAM86B1E9PN63 330 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 LPXNO60711 386 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 OATP04181 439 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 FAM86B2P0C5J1 330 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 CPA1P15085 419 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 BMPR1AP36894 532 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 SARSP49591 514 aaKnown RBP8.42□□□□□ -1.06
CPNE1-226ENST00000486021 UBE3AQ05086 875 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 NCBP1Q09161 790 aaKnown RBP8.42□□□□□ -1.06
CPNE1-226ENST00000486021 STK3Q13188 491 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 ITGB3BPQ13352 177 aaPredicted RBP8.42□□□□□ -1.06
CPNE1-226ENST00000486021 HIC1Q14526 733 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 LPIN1Q14693 890 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 MBTPS1Q14703 1052 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 SAFBQ15424 915 aaKnown RBP eCLIP8.42□□□□□ -1.06
CPNE1-226ENST00000486021 XKR3Q5GH77 459 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 MARCH8Q5T0T0 291 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 EFCAB12Q6NXP0 572 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 RUFY4Q6ZNE9 571 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 SLC24A5Q71RS6 500 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 NEK8Q86SG6 692 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 CCDC60Q8IWA6 550 aaPredicted RBP8.42□□□□□ -1.06
CPNE1-226ENST00000486021 BANK1Q8NDB2 785 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 CYP2W1Q8TAV3 490 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 ADAMTS19Q8TE59 1207 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 GDPD5Q8WTR4 605 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 CRYGNQ8WXF5 182 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 CCDC43Q96MW1 224 aaKnown RBP8.42□□□□□ -1.06
CPNE1-226ENST00000486021 C1QTNF1Q9BXJ1 281 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 ELAC1Q9H777 363 aaKnown RBP8.42□□□□□ -1.06
CPNE1-226ENST00000486021 STK39Q9UEW8 545 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 PUF60Q9UHX1 559 aaKnown RBP8.42□□□□□ -1.06
CPNE1-226ENST00000486021 MTUS1Q9ULD2 1270 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 PADI3Q9ULW8 664 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 GINS2Q9Y248 185 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 KIF3AQ9Y496 699 aa8.42□□□□□ -1.06
CPNE1-226ENST00000486021 CYP3A7-CYP3A51PA0A087WV96 503 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 DGKIO75912 1065 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 SFPQP23246 707 aaKnown RBP eCLIP8.41□□□□□ -1.06
CPNE1-226ENST00000486021 CYP3A7P24462 503 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 CD52P31358 61 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 KRT2P35908 639 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 PSMC5P62195 406 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 KRT17Q04695 432 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 TOB2Q14106 344 aaPredicted RBP8.41□□□□□ -1.06
CPNE1-226ENST00000486021 PPP4R3AQ6IN85 833 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 TCP11Q8WWU5 503 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 CLP1Q92989 425 aaKnown RBP8.41□□□□□ -1.06
CPNE1-226ENST00000486021 PCYT2Q99447 389 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 POP1Q99575 1024 aaKnown RBP8.41□□□□□ -1.06
CPNE1-226ENST00000486021 GCOM2Q9BZD3 368 aaPredicted RBP8.41□□□□□ -1.06
CPNE1-226ENST00000486021 UPF3BQ9BZI7 483 aaKnown RBP8.41□□□□□ -1.06
CPNE1-226ENST00000486021 UPF2Q9HAU5 1272 aaKnown RBP8.41□□□□□ -1.06
CPNE1-226ENST00000486021 ATP6V0A4Q9HBG4 840 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 NCOA5Q9HCD5 579 aaKnown RBP8.41□□□□□ -1.06
CPNE1-226ENST00000486021 CHST12Q9NRB3 414 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 RGS18Q9NS28 235 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 DDX25Q9UHL0 483 aaKnown RBP8.41□□□□□ -1.06
CPNE1-226ENST00000486021 LAMA3Q16787 3333 aa8.41□□□□□ -1.06
CPNE1-226ENST00000486021 LCHNA4D1U4 455 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 RFXAPO00287 272 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 MSH4O15457 936 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 DHX15O43143 795 aaKnown RBP8.4□□□□□ -1.06
CPNE1-226ENST00000486021 ASAP2O43150 1006 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 CCNT1O60563 726 aaKnown RBP8.4□□□□□ -1.06
CPNE1-226ENST00000486021 PFKFB2O60825 505 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 EOMESO95936 686 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 P4HBP07237 508 aaKnown RBP8.4□□□□□ -1.06
CPNE1-226ENST00000486021 LAG3P18627 525 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 EIF4BP23588 611 aaKnown RBP8.4□□□□□ -1.06
CPNE1-226ENST00000486021 PPM1AP35813 382 aa8.4□□□□□ -1.06
CPNE1-226ENST00000486021 TMEM62Q0P6H9 643 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms