RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 LRRC47Q8N1G4 583 aaKnown RBP6.97□□□□□ -1.29
LINC00458-202ENST00000427299 IL17DQ8TAD2 202 aa6.97□□□□□ -1.29
LINC00458-202ENST00000427299 CACTINQ8WUQ7 758 aaKnown RBP6.97□□□□□ -1.29
LINC00458-202ENST00000427299 DNAJC2Q99543 621 aaKnown RBP6.97□□□□□ -1.29
LINC00458-202ENST00000427299 MSL2Q9HCI7 577 aa6.97□□□□□ -1.29
LINC00458-202ENST00000427299 RIC8BQ9NVN3 520 aa6.97□□□□□ -1.29
LINC00458-202ENST00000427299 WDR33Q9C0J8 1336 aaKnown RBP6.97□□□□□ -1.29
LINC00458-202ENST00000427299 CCNB3Q8WWL7 1395 aa6.96□□□□□ -1.29
LINC00458-202ENST00000427299 ARHGAP6O43182 974 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 AMY2AP04746 511 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 C1SP09871 688 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 AMY2BP19961 511 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 PTGS1P23219 599 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 ACRV1P26436 265 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 MCM7P33993 719 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 RPS19P39019 145 aaKnown RBP6.96□□□□□ -1.3
LINC00458-202ENST00000427299 STILQ15468 1287 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 FIGNQ5HY92 759 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 SOGA3Q5TF21 947 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 NBPF6Q5VWK0 638 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 LARP4Q71RC2 724 aaKnown RBP eCLIP6.96□□□□□ -1.3
LINC00458-202ENST00000427299 C1orf210Q8IVY1 113 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 NBPF4Q96M43 638 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 KIAA1683Q9H0B3 1180 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 INCENPQ9NQS7 918 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 BTBD7Q9P203 1132 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 FBXO10Q9UK96 956 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 FGD5Q6ZNL6 1462 aa6.96□□□□□ -1.3
LINC00458-202ENST00000427299 DHX57Q6P158 1386 aaKnown RBP6.95□□□□□ -1.3
LINC00458-202ENST00000427299 HMGCRP04035 888 aa6.95□□□□□ -1.3
LINC00458-202ENST00000427299 AOAHP28039 575 aa6.95□□□□□ -1.3
LINC00458-202ENST00000427299 GJA4P35212 333 aa6.95□□□□□ -1.3
LINC00458-202ENST00000427299 DPTQ07507 201 aa6.95□□□□□ -1.3
LINC00458-202ENST00000427299 SERINC3Q13530 473 aa6.95□□□□□ -1.3
LINC00458-202ENST00000427299 EIF4HQ15056 248 aaKnown RBP6.95□□□□□ -1.3
LINC00458-202ENST00000427299 ZNF808Q8N4W9 903 aaPredicted RBP6.95□□□□□ -1.3
LINC00458-202ENST00000427299 ZNF669Q96BR6 464 aaPredicted RBP6.95□□□□□ -1.3
LINC00458-202ENST00000427299 TRIM8Q9BZR9 551 aa6.95□□□□□ -1.3
LINC00458-202ENST00000427299 IKZF4Q9H2S9 585 aa6.95□□□□□ -1.3
LINC00458-202ENST00000427299 GALNT8Q9NY28 637 aa6.95□□□□□ -1.3
LINC00458-202ENST00000427299 C11orf21Q9P2W6 132 aa6.95□□□□□ -1.3
LINC00458-202ENST00000427299 ATP23Q9Y6H3 246 aa6.95□□□□□ -1.3
LINC00458-202ENST00000427299 AQRO60306 1485 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINC00458-202ENST00000427299 LAMC3Q9Y6N6 1575 aa6.95□□□□□ -1.3
LINC00458-202ENST00000427299 SUPT6HQ7KZ85 1726 aaKnown RBP6.94□□□□□ -1.3
LINC00458-202ENST00000427299 PDE6AP16499 860 aa6.94□□□□□ -1.3
LINC00458-202ENST00000427299 ADCY8P40145 1251 aa6.94□□□□□ -1.3
LINC00458-202ENST00000427299 KCNQ1P51787 676 aa6.94□□□□□ -1.3
LINC00458-202ENST00000427299 FOXL1Q12952 345 aa6.94□□□□□ -1.3
LINC00458-202ENST00000427299 SMN1Q16637 294 aaKnown RBP6.94□□□□□ -1.3
LINC00458-202ENST00000427299 MAMDC2Q7Z304 686 aaPredicted RBP6.94□□□□□ -1.3
LINC00458-202ENST00000427299 PTRH1Q86Y79 214 aaKnown RBP6.94□□□□□ -1.3
LINC00458-202ENST00000427299 PCDH19Q8TAB3 1148 aa6.94□□□□□ -1.3
LINC00458-202ENST00000427299 WNK4Q96J92 1243 aa6.94□□□□□ -1.3
LINC00458-202ENST00000427299 C12orf65Q9H3J6 166 aaKnown RBP6.94□□□□□ -1.3
LINC00458-202ENST00000427299 PUF60Q9UHX1 559 aaKnown RBP6.94□□□□□ -1.3
LINC00458-202ENST00000427299 GCC2Q8IWJ2 1684 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 LRRC9Q6ZRR7 1453 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 ABCA10Q8WWZ4 1543 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 AQP7O14520 342 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 MPIG6BO95866 241 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 C4BPAP04003 597 aaKnown RBP6.93□□□□□ -1.3
LINC00458-202ENST00000427299 MC4RP32245 332 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 INHBEP58166 350 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 RAB33AQ14088 237 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 TRIM68Q6AZZ1 485 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 USP30Q70CQ3 517 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 FBXW5Q969U6 566 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 CEP89Q96ST8 783 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 CBLCQ9ULV8 474 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 SAMD9Q5K651 1589 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 ABCA5Q8WWZ7 1642 aa6.93□□□□□ -1.3
LINC00458-202ENST00000427299 EHBP1L1Q8N3D4 1523 aa6.92□□□□□ -1.3
LINC00458-202ENST00000427299 ARVCFO00192 962 aa6.92□□□□□ -1.3
LINC00458-202ENST00000427299 ADCY3O60266 1144 aa6.92□□□□□ -1.3
LINC00458-202ENST00000427299 MSX2P35548 267 aaPredicted RBP6.92□□□□□ -1.3
LINC00458-202ENST00000427299 HERVK_113P62684 666 aa6.92□□□□□ -1.3
LINC00458-202ENST00000427299 FNDC7Q5VTL7 733 aa6.92□□□□□ -1.3
LINC00458-202ENST00000427299 MTDHQ86UE4 582 aaKnown RBP6.92□□□□□ -1.3
LINC00458-202ENST00000427299 OSTM1Q86WC4 334 aa6.92□□□□□ -1.3
LINC00458-202ENST00000427299 CKAP2LQ8IYA6 745 aa6.92□□□□□ -1.3
LINC00458-202ENST00000427299 PTPRN2Q92932 1015 aa6.92□□□□□ -1.3
LINC00458-202ENST00000427299 PLEKHG4BQ96PX9 1271 aa6.92□□□□□ -1.3
LINC00458-202ENST00000427299 SPATA9Q9BWV2 254 aa6.92□□□□□ -1.3
LINC00458-202ENST00000427299 BTBD2Q9BX70 525 aa6.92□□□□□ -1.3
LINC00458-202ENST00000427299 CATSPERZQ9NTU4 200 aa6.92□□□□□ -1.3
LINC00458-202ENST00000427299 PLA2G3Q9NZ20 509 aa6.92□□□□□ -1.3
LINC00458-202ENST00000427299 PBRM1Q86U86 1689 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 ZNF561-AS1K7EIQ3 104 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 U2SURPO15042 1029 aaKnown RBP6.91□□□□□ -1.3
LINC00458-202ENST00000427299 C6orf222P0C671 652 aaPredicted RBP6.91□□□□□ -1.3
LINC00458-202ENST00000427299 PYGMP11217 842 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 JAM2P57087 298 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 PCOLCEQ15113 449 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 CCDC144BQ3MJ40 725 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 KANK2Q63ZY3 851 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 C16orf59Q7L2K0 433 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 GPR135Q8IZ08 494 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 MKL1Q969V6 931 aa6.91□□□□□ -1.3
LINC00458-202ENST00000427299 AMNQ9BXJ7 453 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms