RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 GHRP10912 638 aa16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 MRPS5P82675 430 aaKnown RBP16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 CDC42EP1Q00587 391 aa16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 SCRN1Q12765 414 aa16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 NONOQ15233 471 aaKnown RBP eCLIP16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 RASGRP4Q8TDF6 673 aa16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 PPM1EQ8WY54 764 aa16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 SLC5A5Q92911 643 aa16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 YME1L1Q96TA2 773 aa16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 DISC1Q9NRI5 854 aa16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 THEGQ9P2T0 379 aa16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 COG5Q9UP83 839 aa16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 RWDD3Q9Y3V2 267 aa16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 IGSF9BQ9UPX0 1349 aa16.43■□□□□ 0.22
NIF3L1-205ENST00000409588 LCHNA4D1U4 455 aa16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 ADAMTS3O15072 1205 aa16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 GAS7O60861 476 aa16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 PPFIA3O75145 1194 aa16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 TMOD1P28289 359 aa16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 CCDC85BQ15834 202 aaPredicted RBP16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 LRCH2Q5VUJ6 765 aa16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 MBOAT7Q96N66 472 aa16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 PHF20Q9BVI0 1012 aa16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 TEKT3Q9BXF9 490 aa16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 COL25A1Q9BXS0 654 aaPredicted RBP16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 FAM49AQ9H0Q0 323 aaPredicted RBP16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 CERS4Q9HA82 394 aa16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 SUGCTQ9HAC7 445 aa16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 TPCN1Q9ULQ1 816 aa16.42■□□□□ 0.22
NIF3L1-205ENST00000409588 RB1P06400 928 aa16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 GCFC2P16383 781 aaKnown RBP16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 ATP4AP20648 1035 aa16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 GRB10Q13322 594 aa16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 PTPROQ16827 1216 aa16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 PPP4R3AQ6IN85 833 aa16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 FAM117BQ6P1L5 589 aa16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 TMCO2Q7Z6W1 182 aaPredicted RBP16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 KIAA0319LQ8IZA0 1049 aa16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 IL27Q8NEV9 243 aa16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 FAM20AQ96MK3 541 aa16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 ASB2Q96Q27 587 aa16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 LARP6Q9BRS8 491 aaKnown RBP16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 GABBR1Q9UBS5 961 aa16.41■□□□□ 0.22
NIF3L1-205ENST00000409588 CCDC194A0A1B0GVG4 234 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 RFXAPO00287 272 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 GPR182O15218 404 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 EDIL3O43854 480 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 LPXNO60711 386 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 PSMD10O75832 226 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 UPP2O95045 317 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 STAG3L1P0CL83 205 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 CRYBB1P53674 252 aaPredicted RBP16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 AK2P54819 239 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 PAK2Q13177 524 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 FIBCD1Q8N539 461 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 FBXO22Q8NEZ5 403 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 TRAPPC12Q8WVT3 735 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 OSBPL7Q9BZF2 842 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 PADI3Q9ULW8 664 aa16.4■□□□□ 0.22
NIF3L1-205ENST00000409588 EPOPA6NHQ4 379 aa16.39■□□□□ 0.21
NIF3L1-205ENST00000409588 ZBTB42B2RXF5 422 aa16.39■□□□□ 0.21
NIF3L1-205ENST00000409588 TBX3O15119 743 aa16.39■□□□□ 0.21
NIF3L1-205ENST00000409588 DKC1O60832 514 aaKnown RBP eCLIP16.39■□□□□ 0.21
NIF3L1-205ENST00000409588 ARHGEF15O94989 841 aa16.39■□□□□ 0.21
NIF3L1-205ENST00000409588 NEK4P51957 841 aa16.39■□□□□ 0.21
NIF3L1-205ENST00000409588 NPY5RQ15761 445 aa16.39■□□□□ 0.21
NIF3L1-205ENST00000409588 EXOC8Q8IYI6 725 aa16.39■□□□□ 0.21
NIF3L1-205ENST00000409588 AGO3Q9H9G7 860 aaKnown RBP16.39■□□□□ 0.21
NIF3L1-205ENST00000409588 BRMS1Q9HCU9 246 aa16.39■□□□□ 0.21
NIF3L1-205ENST00000409588 ORC3Q9UBD5 711 aaPredicted RBP16.39■□□□□ 0.21
NIF3L1-205ENST00000409588 MICAL3Q7RTP6 2002 aa16.39■□□□□ 0.21
NIF3L1-205ENST00000409588 COL4A6Q14031 1691 aa16.39■□□□□ 0.21
NIF3L1-205ENST00000409588 H3BNC9 293 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 RPS6KA5O75582 802 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 C22orf31O95567 290 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 OATP04181 439 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 CD52P31358 61 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 EPC2Q52LR7 807 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 B3GNT9Q6UX72 402 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 MIER3Q7Z3K6 550 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 NEK8Q86SG6 692 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 TMEM192Q8IY95 271 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 CRIPAKQ8N1N5 446 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 METTL13Q8N6R0 699 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 ZNF689Q96CS4 500 aaPredicted RBP16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 MAP7D2Q96T17 732 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 PLVAPQ9BX97 442 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 NIFKQ9BYG3 293 aaKnown RBP16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 C1orf112Q9NSG2 853 aa16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 DDX25Q9UHL0 483 aaKnown RBP16.38■□□□□ 0.21
NIF3L1-205ENST00000409588 CUL9Q8IWT3 2517 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 C5orf67F2Z3F1 127 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 DGKIO75912 1065 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 TMEM62Q0P6H9 643 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 SKIV2LQ15477 1246 aaKnown RBP16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 NAALADL2Q58DX5 795 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 XKR3Q5GH77 459 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 NPAS4Q8IUM7 802 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 MICALL1Q8N3F8 863 aa16.37■□□□□ 0.21
NIF3L1-205ENST00000409588 ETNPPLQ8TBG4 499 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms