RNA–Protein interactions for RNA: ENST00000366792.3

PARP1-202, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3 BASIC

Gene PARP1, Length 553 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-202ENST00000366792 SMC3Q9UQE7 1217 aa23.64■■□□□ 1.37
PARP1-202ENST00000366792 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.64■■□□□ 1.37
PARP1-202ENST00000366792 TRPV2Q9Y5S1 764 aa23.64■■□□□ 1.37
PARP1-202ENST00000366792 TMEM265A0A087WTH1 108 aa23.63■■□□□ 1.37
PARP1-202ENST00000366792 KIF28PB7ZC32 967 aa23.63■■□□□ 1.37
PARP1-202ENST00000366792 PSMC5P62195 406 aa23.63■■□□□ 1.37
PARP1-202ENST00000366792 DEFB103AP81534 67 aa23.63■■□□□ 1.37
PARP1-202ENST00000366792 NME8Q8N427 588 aa23.63■■□□□ 1.37
PARP1-202ENST00000366792 NKX2-4Q9H2Z4 354 aa23.63■■□□□ 1.37
PARP1-202ENST00000366792 SEMA6BQ9H3T3 888 aa23.63■■□□□ 1.37
PARP1-202ENST00000366792 YBX2Q9Y2T7 364 aaKnown RBP23.63■■□□□ 1.37
PARP1-202ENST00000366792 MAGEB2O15479 319 aa23.62■■□□□ 1.37
PARP1-202ENST00000366792 TXKP42681 527 aa23.62■■□□□ 1.37
PARP1-202ENST00000366792 LPIN1Q14693 890 aa23.62■■□□□ 1.37
PARP1-202ENST00000366792 XKR3Q5GH77 459 aa23.62■■□□□ 1.37
PARP1-202ENST00000366792 HERC6Q8IVU3 1022 aa23.62■■□□□ 1.37
PARP1-202ENST00000366792 KIAA0319LQ8IZA0 1049 aa23.62■■□□□ 1.37
PARP1-202ENST00000366792 APBB2Q92870 758 aa23.62■■□□□ 1.37
PARP1-202ENST00000366792 NOL7Q9UMY1 257 aaKnown RBP23.62■■□□□ 1.37
PARP1-202ENST00000366792 PCDHA12Q9UN75 941 aa23.62■■□□□ 1.37
PARP1-202ENST00000366792 GINS2Q9Y248 185 aa23.62■■□□□ 1.37
PARP1-202ENST00000366792 PCDHA11Q9Y5I1 949 aa23.62■■□□□ 1.37
PARP1-202ENST00000366792 EVPLQ92817 2033 aa23.62■■□□□ 1.37
PARP1-202ENST00000366792 PTPRSQ13332 1948 aa23.61■■□□□ 1.37
PARP1-202ENST00000366792 MICAL3Q7RTP6 2002 aa23.61■■□□□ 1.37
PARP1-202ENST00000366792 TMEM150BA6NC51 233 aa23.61■■□□□ 1.37
PARP1-202ENST00000366792 DDX11L8A8MPP1 907 aa23.61■■□□□ 1.37
PARP1-202ENST00000366792 MYOGP15173 224 aa23.61■■□□□ 1.37
PARP1-202ENST00000366792 QARSP47897 775 aaKnown RBP23.61■■□□□ 1.37
PARP1-202ENST00000366792 SPIRE1Q08AE8 756 aa23.61■■□□□ 1.37
PARP1-202ENST00000366792 EPHA7Q15375 998 aa23.61■■□□□ 1.37
PARP1-202ENST00000366792 ZNF174Q15697 407 aa23.61■■□□□ 1.37
PARP1-202ENST00000366792 MTERF2Q49AM1 385 aa23.61■■□□□ 1.37
PARP1-202ENST00000366792 FBXO47Q5MNV8 452 aa23.61■■□□□ 1.37
PARP1-202ENST00000366792 TTC38Q5R3I4 469 aa23.61■■□□□ 1.37
PARP1-202ENST00000366792 MCTP1Q6DN14 999 aa23.61■■□□□ 1.37
PARP1-202ENST00000366792 TMCO2Q7Z6W1 182 aaPredicted RBP23.61■■□□□ 1.37
PARP1-202ENST00000366792 CELF4Q9BZC1 486 aaKnown RBP23.61■■□□□ 1.37
PARP1-202ENST00000366792 ZNF576Q9H609 170 aa23.61■■□□□ 1.37
PARP1-202ENST00000366792 TTC12Q9H892 705 aaPredicted RBP23.61■■□□□ 1.37
PARP1-202ENST00000366792 H3BQV1 296 aa23.6■■□□□ 1.37
PARP1-202ENST00000366792 DKC1O60832 514 aaKnown RBP eCLIP23.6■■□□□ 1.37
PARP1-202ENST00000366792 AMHP03971 560 aa23.6■■□□□ 1.37
PARP1-202ENST00000366792 P4HBP07237 508 aaKnown RBP23.6■■□□□ 1.37
PARP1-202ENST00000366792 U2AF2P26368 475 aaKnown RBP eCLIP23.6■■□□□ 1.37
PARP1-202ENST00000366792 CLCN3P51790 818 aa23.6■■□□□ 1.37
PARP1-202ENST00000366792 TBC1D8BQ0IIM8 1120 aa23.6■■□□□ 1.37
PARP1-202ENST00000366792 EFCAB12Q6NXP0 572 aa23.6■■□□□ 1.37
PARP1-202ENST00000366792 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.6■■□□□ 1.377e-12■■□□□ 12.1
PARP1-202ENST00000366792 TSHZ1Q6ZSZ6 1077 aa23.6■■□□□ 1.37
PARP1-202ENST00000366792 LRRC71Q8N4P6 559 aa23.6■■□□□ 1.37
PARP1-202ENST00000366792 MTMR9Q96QG7 549 aa23.6■■□□□ 1.37
PARP1-202ENST00000366792 PPP1R16BQ96T49 567 aa23.6■■□□□ 1.37
PARP1-202ENST00000366792 ZBED2Q9BTP6 218 aa23.6■■□□□ 1.37
PARP1-202ENST00000366792 NIFKQ9BYG3 293 aaKnown RBP23.6■■□□□ 1.37
PARP1-202ENST00000366792 TMEM60Q9H2L4 133 aa23.6■■□□□ 1.37
PARP1-202ENST00000366792 SLC28A3Q9HAS3 691 aa23.6■■□□□ 1.37
PARP1-202ENST00000366792 STBD1O95210 358 aa23.59■■□□□ 1.37
PARP1-202ENST00000366792 TMOD1P28289 359 aa23.59■■□□□ 1.37
PARP1-202ENST00000366792 TRAPPC10P48553 1259 aa23.59■■□□□ 1.37
PARP1-202ENST00000366792 MYOCDQ8IZQ8 938 aa23.59■■□□□ 1.37
PARP1-202ENST00000366792 GUCD1Q96NT3 240 aa23.59■■□□□ 1.37
PARP1-202ENST00000366792 MAP7D2Q96T17 732 aa23.59■■□□□ 1.37
PARP1-202ENST00000366792 SH2D3AQ9BRG2 576 aa23.59■■□□□ 1.37
PARP1-202ENST00000366792 LXNQ9BS40 222 aa23.59■■□□□ 1.37
PARP1-202ENST00000366792 SUGCTQ9HAC7 445 aa23.59■■□□□ 1.37
PARP1-202ENST00000366792 RGL1Q9NZL6 768 aa23.59■■□□□ 1.37
PARP1-202ENST00000366792 AKT3Q9Y243 479 aa23.59■■□□□ 1.37
PARP1-202ENST00000366792 TLL1O43897 1013 aa23.58■■□□□ 1.37
PARP1-202ENST00000366792 VTNP04004 478 aa23.58■■□□□ 1.37
PARP1-202ENST00000366792 CD52P31358 61 aa23.58■■□□□ 1.37
PARP1-202ENST00000366792 CYP4A11Q02928 519 aa23.58■■□□□ 1.37
PARP1-202ENST00000366792 ORC2Q13416 577 aaPredicted RBP23.58■■□□□ 1.37
PARP1-202ENST00000366792 TARBP2Q15633 366 aaKnown RBP23.58■■□□□ 1.37
PARP1-202ENST00000366792 PPP2R2DQ66LE6 453 aa23.58■■□□□ 1.37
PARP1-202ENST00000366792 PLA2G4FQ68DD2 849 aa23.58■■□□□ 1.37
PARP1-202ENST00000366792 FAM117BQ6P1L5 589 aa23.58■■□□□ 1.37
PARP1-202ENST00000366792 USP38Q8NB14 1042 aa23.58■■□□□ 1.37
PARP1-202ENST00000366792 DYDC2Q96IM9 177 aa23.58■■□□□ 1.37
PARP1-202ENST00000366792 AGO3Q9H9G7 860 aaKnown RBP23.58■■□□□ 1.37
PARP1-202ENST00000366792 LOXHD1Q8IVV2 1947 aa23.58■■□□□ 1.37
PARP1-202ENST00000366792 KDM3AQ9Y4C1 1321 aa23.58■■□□□ 1.36
PARP1-202ENST00000366792 CA3P07451 260 aa23.57■■□□□ 1.36
PARP1-202ENST00000366792 OR52Z1P0C646 297 aa23.57■■□□□ 1.36
PARP1-202ENST00000366792 PAK2Q13177 524 aa23.57■■□□□ 1.36
PARP1-202ENST00000366792 MKRN4PQ13434 485 aaPredicted RBP23.57■■□□□ 1.36
PARP1-202ENST00000366792 CTTNQ14247 550 aaKnown RBP23.57■■□□□ 1.36
PARP1-202ENST00000366792 NBR1Q14596 966 aa23.57■■□□□ 1.36
PARP1-202ENST00000366792 KIZQ2M2Z5 673 aa23.57■■□□□ 1.36
PARP1-202ENST00000366792 ANO5Q75V66 913 aa23.57■■□□□ 1.36
PARP1-202ENST00000366792 EIF2AK1Q9BQI3 630 aaKnown RBP23.57■■□□□ 1.36
PARP1-202ENST00000366792 WRAP73Q9P2S5 460 aaPredicted RBP23.57■■□□□ 1.36
PARP1-202ENST00000366792 SQORQ9Y6N5 450 aa23.57■■□□□ 1.36
PARP1-202ENST00000366792 CUL4AQ13619 759 aa23.56■■□□□ 1.36
PARP1-202ENST00000366792 GRIN2CQ14957 1233 aa23.56■■□□□ 1.36
PARP1-202ENST00000366792 LARP1BQ659C4 914 aaKnown RBP23.56■■□□□ 1.36
PARP1-202ENST00000366792 TPH2Q8IWU9 490 aa23.56■■□□□ 1.36
PARP1-202ENST00000366792 CDX2Q99626 313 aaPredicted RBP23.56■■□□□ 1.36
PARP1-202ENST00000366792 ZSWIM4Q9H7M6 989 aa23.56■■□□□ 1.36
PARP1-202ENST00000366792 CDHR5Q9HBB8 845 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms