RNA–Protein interactions for RNA: tC(GCA)P1

tC(GCA)P1, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)P1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)P1tC(GCA)P1 URA10P30402 227 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 SRB4P32569 687 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 SSE1P32589 693 aaKnown RBP2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 SWH1P35845 1188 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 SET3P36124 751 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 YER034WP40022 185 aaKnown RBP2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 YEN1P40028 759 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 LCP5P40079 357 aaPredicted RBP2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 YMR134WP40207 237 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 HOS2P53096 452 aaPredicted RBP2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 SCW11P53189 542 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 RHO4Q00246 291 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 NAN1Q02931 896 aaKnown RBP2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 SWF1Q04629 336 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 COX20Q04935 205 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 CDC123Q05791 360 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 TPO3Q06451 622 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 SSK1Q07084 712 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 GAT3Q07928 141 aa2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 RDL2Q08742 149 aaKnown RBP2.74□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 RAD1P06777 1100 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 RHO1P06780 209 aaKnown RBP2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 AAC3P18238 307 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 URE2P23202 354 aaKnown RBP2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 URA7P28274 579 aaKnown RBP2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 YPT7P32939 208 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 LOS1P33418 1100 aaPredicted RBP2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 ANS1P38832 159 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 NSG1P38837 291 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 END3P39013 349 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 AIM2P39721 246 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 YER084WP40057 128 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 RFC4P40339 323 aaKnown RBP2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 MIC19P43594 170 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 MTM1P53320 366 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 YPL039WQ03080 316 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 RCE1Q03530 315 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 YAP6Q03935 383 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 YBL113CQ7M4S9 792 aa2.73□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 PHO81P17442 1178 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 RRP43P25359 394 aaPredicted RBP2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 MGT1P26188 188 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 AUA1P32450 94 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 COS9P36034 407 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 SHM2P37291 469 aaKnown RBP2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 YBR138CP38277 524 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 CTR2P38865 189 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 ATG3P40344 310 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 GZF3P42944 551 aaKnown RBP2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 UBC13P52490 153 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 TAF6P53040 516 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 SHY1P53266 389 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 YNL165WP53891 406 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 YPL108WQ02872 168 aaPredicted RBP2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 KAP120Q02932 1032 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 MET31Q03081 177 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 MUM3Q08750 479 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 FCY22Q12119 530 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 ATG34Q12292 412 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 FSH3Q99369 266 aa2.72□□□□□ -1.97
tC(GCA)P1tC(GCA)P1 RAS2P01120 322 aaKnown RBP2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 ALG7P07286 448 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 UGA1P17649 471 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 RPB5P20434 215 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 HXT1P32465 570 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 PPG1P32838 368 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 SOF1P33750 489 aaKnown RBP2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 PBP2P38151 413 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
tC(GCA)P1tC(GCA)P1 BMT2P38278 337 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 HOS4P40480 1083 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 LEM3P42838 414 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 YPT32P51996 222 aaKnown RBP2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 RIM8P53179 542 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 BUD9P53226 547 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 HST2P53686 357 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 RHO5P53879 331 aaKnown RBP2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 YNL140CP53910 189 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 RPL6AQ02326 176 aaKnown RBP2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 MTG1Q03151 367 aaPredicted RBP2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 YMR279CQ03263 540 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 SSY1Q03770 852 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 CSN9Q03981 162 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 CTS2Q06350 511 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 FDH1Q08911 376 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 YOR223WQ12015 292 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 NMD4Q12129 218 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 RUD3Q12234 484 aaKnown RBP2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 NPC2Q12408 173 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 YMR030W-AQ3E760 96 aa2.71□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 YAL064W-BO13512 126 aa2.7□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 ATP2P00830 511 aaKnown RBP2.7□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 SPT3P06844 337 aa2.7□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 RPB4P20433 221 aaPredicted RBP2.7□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 EHD3P28817 500 aa2.7□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 MDH3P32419 343 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
tC(GCA)P1tC(GCA)P1 VPS21P36017 210 aaKnown RBP2.7□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 GLY1P37303 387 aaKnown RBP2.7□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 YHR097CP38809 366 aaKnown RBP2.7□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 ATG7P38862 630 aa2.7□□□□□ -1.98
tC(GCA)P1tC(GCA)P1 RTA1P53047 317 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms