RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C PLB2Q03674 706 aa9.02□□□□□ -0.97
SPT20YOL148C RRN11Q04712 507 aa9.02□□□□□ -0.97
SPT20YOL148C PUF2Q12221 1075 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97 RIP-Chip
SPT20YOL148C NHP6BP11633 99 aaKnown RBP9.01□□□□□ -0.97
SPT20YOL148C MSM1P22438 575 aa9.01□□□□□ -0.97
SPT20YOL148C KRE6P32486 720 aa9.01□□□□□ -0.97
SPT20YOL148C YKL151CP36059 337 aa9.01□□□□□ -0.97
SPT20YOL148C UIP5P36137 443 aa9.01□□□□□ -0.97
SPT20YOL148C APM3P38153 483 aa9.01□□□□□ -0.97
SPT20YOL148C RMD6P39975 231 aa9.01□□□□□ -0.97
SPT20YOL148C LAS21P40367 830 aa9.01□□□□□ -0.97
SPT20YOL148C SRB7P47822 140 aa9.01□□□□□ -0.97
SPT20YOL148C ROG1P53118 685 aa9.01□□□□□ -0.97
SPT20YOL148C SPG3Q04398 127 aaPredicted RBP9.01□□□□□ -0.97
SPT20YOL148C YDR056CQ12025 205 aa9.01□□□□□ -0.97
SPT20YOL148C PCC1Q3E833 88 aa9.01□□□□□ -0.97
SPT20YOL148C GAL2P13181 574 aa9.01□□□□□ -0.97
SPT20YOL148C GLN3P18494 730 aa9.01□□□□□ -0.97
SPT20YOL148C RDS2P19541 446 aaKnown RBP9.01□□□□□ -0.97
SPT20YOL148C SIS1P25294 352 aaKnown RBP9.01□□□□□ -0.97
SPT20YOL148C SEC17P32602 292 aa9.01□□□□□ -0.97
SPT20YOL148C RFC4P40339 323 aaKnown RBP9.01□□□□□ -0.97
SPT20YOL148C GLR1P41921 483 aaKnown RBP9.01□□□□□ -0.97
SPT20YOL148C SNG1P46950 547 aa9.01□□□□□ -0.97
SPT20YOL148C MOG1P47123 218 aa9.01□□□□□ -0.97
SPT20YOL148C PMT5P52867 743 aa9.01□□□□□ -0.97
SPT20YOL148C YAF9P53930 226 aa9.01□□□□□ -0.97
SPT20YOL148C ERV25P54837 211 aaKnown RBP9.01□□□□□ -0.97
SPT20YOL148C NAM8Q00539 523 aaKnown RBP9.01□□□□□ -0.97
SPT20YOL148C YPL113CQ02961 396 aa9.01□□□□□ -0.97
SPT20YOL148C MET31Q03081 177 aa9.01□□□□□ -0.97
SPT20YOL148C MSS11Q03825 758 aa9.01□□□□□ -0.97
SPT20YOL148C SPO77Q06134 477 aa9.01□□□□□ -0.97
SPT20YOL148C PKH2Q12236 1081 aaKnown RBP9.01□□□□□ -0.97
SPT20YOL148C TY1A-DR3Q12441 440 aa9.01□□□□□ -0.97
SPT20YOL148C ISN1Q99312 450 aa9.01□□□□□ -0.97
SPT20YOL148C LDS1P31379 325 aa9□□□□□ -0.97
SPT20YOL148C LYP1P32487 611 aa9□□□□□ -0.97
SPT20YOL148C CTF13P35203 478 aa9□□□□□ -0.97
SPT20YOL148C TMA19P35691 167 aaKnown RBP9□□□□□ -0.97
SPT20YOL148C SRY1P36007 326 aa9□□□□□ -0.97
SPT20YOL148C YPT52P36018 234 aaKnown RBP9□□□□□ -0.97
SPT20YOL148C IKI1P38874 309 aa9□□□□□ -0.97
SPT20YOL148C CTF8P38877 133 aa9□□□□□ -0.97
SPT20YOL148C ALG8P40351 577 aa9□□□□□ -0.97
SPT20YOL148C FMC1P40491 155 aa9□□□□□ -0.97
SPT20YOL148C CDC1P40986 491 aa9□□□□□ -0.97
SPT20YOL148C BFA1P47113 574 aa9□□□□□ -0.97
SPT20YOL148C STE24P47154 453 aa9□□□□□ -0.97
SPT20YOL148C EAR1Q03212 550 aa9□□□□□ -0.97
SPT20YOL148C CTK1Q03957 528 aaKnown RBP9□□□□□ -0.97
SPT20YOL148C ATG38Q05789 226 aaKnown RBP9□□□□□ -0.97
SPT20YOL148C YLR173WQ06247 608 aa9□□□□□ -0.97
SPT20YOL148C MRPL35Q06678 367 aa9□□□□□ -0.97
SPT20YOL148C YPR022CQ12139 1133 aa9□□□□□ -0.97
SPT20YOL148C PSF1Q12488 208 aa9□□□□□ -0.97
SPT20YOL148C CIT2P08679 460 aa8.99□□□□□ -0.97
SPT20YOL148C KAR1P11927 433 aa8.99□□□□□ -0.97
SPT20YOL148C PPH22P23595 377 aa8.99□□□□□ -0.97
SPT20YOL148C IDH1P28834 360 aaKnown RBP RIP-Chip data8.99□□□□□ -0.97not detected
SPT20YOL148C ASC1P38011 319 aaKnown RBP8.99□□□□□ -0.97
SPT20YOL148C BMT2P38278 337 aa8.99□□□□□ -0.97
SPT20YOL148C COS111P38308 924 aa8.99□□□□□ -0.97
SPT20YOL148C AIM46P38885 310 aa8.99□□□□□ -0.97
SPT20YOL148C GTT3P39996 337 aa8.99□□□□□ -0.97
SPT20YOL148C IST3P40565 148 aaPredicted RBP8.99□□□□□ -0.97
SPT20YOL148C YJL016WP47072 561 aa8.99□□□□□ -0.97
SPT20YOL148C YJR030CP47101 745 aa8.99□□□□□ -0.97
SPT20YOL148C TIS11P47977 285 aa8.99□□□□□ -0.97
SPT20YOL148C FOL2P51601 243 aaKnown RBP8.99□□□□□ -0.97
SPT20YOL148C COS10P52924 374 aa8.99□□□□□ -0.97
SPT20YOL148C GPG1P53130 126 aa8.99□□□□□ -0.97
SPT20YOL148C ACS1Q01574 713 aa8.99□□□□□ -0.97
SPT20YOL148C YMR321CQ04898 105 aa8.99□□□□□ -0.97
SPT20YOL148C HRD3Q05787 833 aa8.99□□□□□ -0.97
SPT20YOL148C ESC8Q08119 714 aa8.99□□□□□ -0.97
SPT20YOL148C TRM8Q12009 286 aa8.99□□□□□ -0.97
SPT20YOL148C YOL114CQ12322 202 aa8.99□□□□□ -0.97
SPT20YOL148C MRX4Q12467 430 aa8.99□□□□□ -0.97
SPT20YOL148C CMC2Q3E7A4 109 aa8.99□□□□□ -0.97
SPT20YOL148C YOS9Q99220 542 aa8.99□□□□□ -0.97
SPT20YOL148C HRP1Q99383 534 aaKnown RBP8.99□□□□□ -0.97
SPT20YOL148C FRS1P15624 595 aaKnown RBP8.98□□□□□ -0.97
SPT20YOL148C ERD2P18414 219 aa8.98□□□□□ -0.97
SPT20YOL148C SED4P25365 1065 aa8.98□□□□□ -0.97
SPT20YOL148C SIP1P32578 815 aa8.98□□□□□ -0.97
SPT20YOL148C ARC19P33204 171 aaKnown RBP8.98□□□□□ -0.97
SPT20YOL148C YBR238CP38330 731 aaKnown RBP8.98□□□□□ -0.97
SPT20YOL148C ALP1P38971 573 aa8.98□□□□□ -0.97
SPT20YOL148C PKP1P40530 394 aa8.98□□□□□ -0.97
SPT20YOL148C PFS2P42841 465 aaKnown RBP8.98□□□□□ -0.97
SPT20YOL148C AIM25P47140 327 aa8.98□□□□□ -0.97
SPT20YOL148C SNN1P48232 102 aa8.98□□□□□ -0.97
SPT20YOL148C ARL3Q02804 198 aa8.98□□□□□ -0.97
SPT20YOL148C GAD1Q04792 585 aa8.98□□□□□ -0.97
SPT20YOL148C FMP40Q08968 688 aaPredicted RBP8.98□□□□□ -0.97
SPT20YOL148C SFM1Q12314 213 aa8.98□□□□□ -0.97
SPT20YOL148C RKM5Q12367 367 aa8.98□□□□□ -0.97
SPT20YOL148C RSA4P25382 515 aaKnown RBP8.98□□□□□ -0.97
SPT20YOL148C LHP1P33399 275 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms