RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C SEC9P40357 651 aa0.81□□□□□ -2.28
RKR1YMR247C YIL060WP40519 144 aa0.81□□□□□ -2.28
RKR1YMR247C SPG5P42933 373 aa0.81□□□□□ -2.28
RKR1YMR247C LOC1P43586 204 aaPredicted RBP0.81□□□□□ -2.28
RKR1YMR247C MRX6P48564 524 aa0.81□□□□□ -2.28
RKR1YMR247C MLC1P53141 149 aa0.81□□□□□ -2.28
RKR1YMR247C YGL036WP53185 909 aaPredicted RBP0.81□□□□□ -2.28
RKR1YMR247C MRPL19P53875 158 aa0.81□□□□□ -2.28
RKR1YMR247C GPI15P53961 229 aa0.81□□□□□ -2.28
RKR1YMR247C YLR152CP54072 576 aa0.81□□□□□ -2.28
RKR1YMR247C TAF11Q04226 346 aa0.81□□□□□ -2.28
RKR1YMR247C ADE13Q05911 482 aaKnown RBP0.81□□□□□ -2.28
RKR1YMR247C PFA4Q12006 378 aa0.81□□□□□ -2.28
RKR1YMR247C SPE4Q12455 300 aa0.81□□□□□ -2.28
RKR1YMR247C STE2D6VTK4 431 aa0.81□□□□□ -2.28
RKR1YMR247C ARG3P05150 338 aa0.81□□□□□ -2.28
RKR1YMR247C VMA2P16140 517 aaKnown RBP0.81□□□□□ -2.28
RKR1YMR247C CDC42P19073 191 aa0.81□□□□□ -2.28
RKR1YMR247C MCK1P21965 375 aaKnown RBP0.81□□□□□ -2.28
RKR1YMR247C RPI1P23250 407 aaKnown RBP0.81□□□□□ -2.28
RKR1YMR247C PET18P25362 215 aa0.81□□□□□ -2.28
RKR1YMR247C DAL3P32459 195 aa0.81□□□□□ -2.28
RKR1YMR247C DTR1P38125 572 aa0.81□□□□□ -2.28
RKR1YMR247C SPP381P38282 291 aaPredicted RBP0.81□□□□□ -2.28
RKR1YMR247C CTM1P38818 585 aa0.81□□□□□ -2.28
RKR1YMR247C YHR182WP38870 785 aa0.81□□□□□ -2.28
RKR1YMR247C MMF1P40185 145 aaKnown RBP0.81□□□□□ -2.28
RKR1YMR247C JEM1P40358 645 aa0.81□□□□□ -2.28
RKR1YMR247C YIL054WP40524 105 aa0.81□□□□□ -2.28
RKR1YMR247C AIM24P47127 394 aa0.81□□□□□ -2.28
RKR1YMR247C YPL014WQ02606 381 aa0.81□□□□□ -2.28
RKR1YMR247C SYF1Q04048 859 aaPredicted RBP0.81□□□□□ -2.28
RKR1YMR247C YDR387CQ04162 555 aa0.81□□□□□ -2.28
RKR1YMR247C DIC1Q06143 298 aa0.81□□□□□ -2.28
RKR1YMR247C DCS1Q06151 350 aa0.81□□□□□ -2.28
RKR1YMR247C CUE5Q08412 411 aaKnown RBP0.81□□□□□ -2.28
RKR1YMR247C YOP1Q12402 180 aa0.81□□□□□ -2.28
RKR1YMR247C CPR1P14832 162 aaKnown RBP0.81□□□□□ -2.28
RKR1YMR247C GEX1P25596 615 aa0.81□□□□□ -2.28
RKR1YMR247C NUP2P32499 720 aa0.81□□□□□ -2.28
RKR1YMR247C SSE1P32589 693 aaKnown RBP0.81□□□□□ -2.28
RKR1YMR247C PEX2P32800 271 aa0.81□□□□□ -2.28
RKR1YMR247C APE3P37302 537 aaKnown RBP0.81□□□□□ -2.28
RKR1YMR247C RFT1P38206 574 aaPredicted RBP0.81□□□□□ -2.28
RKR1YMR247C PEX32P38292 413 aa0.81□□□□□ -2.28
RKR1YMR247C YGP1P38616 354 aaKnown RBP0.81□□□□□ -2.28
RKR1YMR247C ECM34P38728 170 aa0.81□□□□□ -2.28
RKR1YMR247C NDT80P38830 627 aa0.81□□□□□ -2.28
RKR1YMR247C MLH1P38920 769 aa0.81□□□□□ -2.28
RKR1YMR247C TOS3P43637 560 aa0.81□□□□□ -2.28
RKR1YMR247C HOS2P53096 452 aaPredicted RBP0.81□□□□□ -2.28
RKR1YMR247C STD1Q02794 444 aa0.81□□□□□ -2.28
RKR1YMR247C TDA9Q04545 1251 aa0.81□□□□□ -2.28
RKR1YMR247C RTN1Q04947 295 aaKnown RBP0.81□□□□□ -2.28
RKR1YMR247C DBP9Q06218 594 aaKnown RBP0.81□□□□□ -2.28
RKR1YMR247C ARR2Q06597 130 aa0.81□□□□□ -2.28
RKR1YMR247C DIB1Q06819 143 aaPredicted RBP0.81□□□□□ -2.28
RKR1YMR247C RLM1Q12224 676 aa0.81□□□□□ -2.28
RKR1YMR247C RTN2Q12443 393 aa0.81□□□□□ -2.28
RKR1YMR247C RGS2Q99188 309 aa0.81□□□□□ -2.28
RKR1YMR247C SEC63P14906 663 aa0.8□□□□□ -2.28
RKR1YMR247C CTA1P15202 515 aa0.8□□□□□ -2.28
RKR1YMR247C HIR2P32480 875 aa0.8□□□□□ -2.28
RKR1YMR247C TFB1P32776 642 aa0.8□□□□□ -2.28
RKR1YMR247C FRE1P32791 686 aa0.8□□□□□ -2.28
RKR1YMR247C PMT1P33775 817 aa0.8□□□□□ -2.28
RKR1YMR247C YKL187CP34231 750 aa0.8□□□□□ -2.28
RKR1YMR247C MED8P38304 223 aa0.8□□□□□ -2.28
RKR1YMR247C SRP72P38688 640 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C CCT2P39076 527 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C YMR147WP40218 223 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C PAN6P40459 309 aa0.8□□□□□ -2.28
RKR1YMR247C RPR2P40571 144 aa0.8□□□□□ -2.28
RKR1YMR247C SEC27P41811 889 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C PHO86P46956 311 aa0.8□□□□□ -2.28
RKR1YMR247C RPA34P47006 233 aaPredicted RBP0.8□□□□□ -2.28
RKR1YMR247C BNA1P47096 177 aa0.8□□□□□ -2.28
RKR1YMR247C YNR061CP53747 219 aa0.8□□□□□ -2.28
RKR1YMR247C YNL050CP53952 270 aa0.8□□□□□ -2.28
RKR1YMR247C MEH1Q02205 184 aa0.8□□□□□ -2.28
RKR1YMR247C PPM1Q04081 328 aa0.8□□□□□ -2.28
RKR1YMR247C PHO92Q06390 306 aa0.8□□□□□ -2.28
RKR1YMR247C MHR1Q06630 226 aa0.8□□□□□ -2.28
RKR1YMR247C SNX3Q08826 162 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C TIP41Q12199 356 aa0.8□□□□□ -2.28
RKR1YMR247C PCD1Q12524 340 aa0.8□□□□□ -2.28
RKR1YMR247C YCL021W-AQ96VH3 125 aa0.8□□□□□ -2.28
RKR1YMR247C RDS1P25611 832 aa0.8□□□□□ -2.28
RKR1YMR247C ADK2P26364 225 aa0.8□□□□□ -2.28
RKR1YMR247C PCH2P38126 564 aa0.8□□□□□ -2.28
RKR1YMR247C KAP104P38217 918 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C SLM4P38247 162 aa0.8□□□□□ -2.28
RKR1YMR247C MTC4P38335 694 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C ALD5P40047 520 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C RPS0BP46654 252 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C AIM22P47051 409 aa0.8□□□□□ -2.28
RKR1YMR247C TRF5P48561 642 aaKnown RBP0.8□□□□□ -2.28
RKR1YMR247C RET3P53600 189 aa0.8□□□□□ -2.28
RKR1YMR247C ARP5P53946 755 aa0.8□□□□□ -2.28
RKR1YMR247C SED5Q01590 340 aa0.8□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms