RNA–Protein interactions for RNA: YKL195W

MIA40, Transcript of Mitochondrial oxidoreductase, yeast

Gene MIA40, Length 1,212 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MIA40	YKL195W	FMP45	Q07651	309 aa		6.19	□□□□□ -1.42
MIA40	YKL195W	NTG2	Q08214	380 aa		6.19	□□□□□ -1.42
MIA40	YKL195W	REX4	Q08237	289 aa		6.19	□□□□□ -1.42
MIA40	YKL195W	SAM4	Q08985	325 aa	Known RBP	6.19	□□□□□ -1.42
MIA40	YKL195W	YOR114W	Q12219	294 aa		6.19	□□□□□ -1.42
MIA40	YKL195W	PST2	Q12335	198 aa	Known RBP	6.19	□□□□□ -1.42
MIA40	YKL195W	VPS13	Q07878	3144 aa		6.19	□□□□□ -1.42
MIA40	YKL195W	RPS17A	P02407	136 aa	Known RBP	6.18	□□□□□ -1.42
MIA40	YKL195W	ENA1	P13587	1091 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	RPS17B	P14127	136 aa	Known RBP	6.18	□□□□□ -1.42
MIA40	YKL195W	RED1	P14291	827 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	CMP2	P14747	604 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	PET9	P18239	318 aa	Known RBP	6.18	□□□□□ -1.42
MIA40	YKL195W	GSH1	P32477	678 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	LOT5	P34234	306 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	ASC1	P38011	319 aa	Known RBP	6.18	□□□□□ -1.42
MIA40	YKL195W	MNN2	P38069	597 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	SCO2	P38072	301 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	YHR033W	P38690	423 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	YHR177W	P38867	453 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	PCF11	P39081	626 aa	Predicted RBP	6.18	□□□□□ -1.42
MIA40	YKL195W	AST2	P39945	430 aa	Known RBP	6.18	□□□□□ -1.42
MIA40	YKL195W	TPA1	P40032	644 aa	Known RBP	6.18	□□□□□ -1.42
MIA40	YKL195W	LYS12	P40495	371 aa	Known RBP	6.18	□□□□□ -1.42
MIA40	YKL195W	MNT3	P40549	630 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	IRC24	P40580	263 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	CIK1	Q01649	594 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	ENA2	Q01896	1091 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	MSC1	Q03104	513 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	YMD8	Q03697	442 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	MGR3	Q04472	501 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	PDR8	Q06149	701 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	EAF1	Q06337	982 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	BRE4	Q07660	1125 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	MRX4	Q12467	430 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	YPR064W	Q12492	139 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	ENA5	Q12691	1091 aa		6.18	□□□□□ -1.42
MIA40	YKL195W	HRP1	Q99383	534 aa	Known RBP	6.18	□□□□□ -1.42
MIA40	YKL195W	PUT2	P07275	575 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	BUD5	P25300	642 aa	Predicted RBP	6.17	□□□□□ -1.42
MIA40	YKL195W	RRP7	P25368	297 aa	Predicted RBP	6.17	□□□□□ -1.42
MIA40	YKL195W	YJU2	P28320	278 aa	Predicted RBP	6.17	□□□□□ -1.42
MIA40	YKL195W	SFC1	P33303	322 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	YPK3	P38070	525 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	YBR139W	P38109	508 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	BIG1	P38813	335 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	AIM2	P39721	246 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	ISC1	P40015	477 aa	Known RBP	6.17	□□□□□ -1.42
MIA40	YKL195W	FAU1	P40099	211 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	PAC11	P40960	533 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	PRM10	P42946	383 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	NQM1	P53228	333 aa	Predicted RBP	6.17	□□□□□ -1.42
MIA40	YKL195W	TWF1	P53250	332 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	YGR168C	P53293	376 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	GRX5	Q02784	150 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	RSC9	Q03124	581 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	RIM13	Q03792	727 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	CTK1	Q03957	528 aa	Known RBP	6.17	□□□□□ -1.42
MIA40	YKL195W	GAL83	Q04739	417 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	ROY1	Q04847	553 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	YLR345W	Q06137	509 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	NEJ1	Q06148	342 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	YPL119C-A	Q3E751	87 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	NAG1	Q8TGN9	163 aa		6.17	□□□□□ -1.42
MIA40	YKL195W	ZWF1	P11412	505 aa	Known RBP	6.16	□□□□□ -1.42
MIA40	YKL195W	SCL1	P21243	252 aa	Known RBP	6.16	□□□□□ -1.42
MIA40	YKL195W	RAD51	P25454	400 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	ADE1	P27616	306 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	6.16	□□□□□ -1.42	not detected
MIA40	YKL195W	PUP2	P32379	260 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	RPN2	P32565	945 aa	Known RBP	6.16	□□□□□ -1.42
MIA40	YKL195W	RIB7	P33312	244 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	CTF8	P38877	133 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	PSA1	P41940	361 aa	Known RBP	6.16	□□□□□ -1.42
MIA40	YKL195W	RET2	P43621	546 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	STE24	P47154	453 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	RAD17	P48581	401 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	COQ5	P49017	307 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	NUP49	Q02199	472 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	YKR005C	Q02203	525 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	YPL113C	Q02961	396 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	RCF1	Q03713	159 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	GPI17	Q04080	534 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	BOP2	Q06150	570 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	RRP40	Q08285	240 aa	Known RBP	6.16	□□□□□ -1.42
MIA40	YKL195W	DCI1	Q08558	271 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	ALG6	Q12001	544 aa	Known RBP	6.16	□□□□□ -1.42
MIA40	YKL195W	DIN7	Q12086	430 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	YGK3	Q12222	375 aa	Predicted RBP	6.16	□□□□□ -1.42
MIA40	YKL195W	YLR111W	Q12528	110 aa		6.16	□□□□□ -1.42
MIA40	YKL195W	RPN13	O13563	156 aa		6.15	□□□□□ -1.42
MIA40	YKL195W	CYC7	P00045	113 aa		6.15	□□□□□ -1.42
MIA40	YKL195W	IDP1	P21954	428 aa	Known RBP	6.15	□□□□□ -1.42
MIA40	YKL195W	ERG1	P32476	496 aa	Known RBP	6.15	□□□□□ -1.42
MIA40	YKL195W	MKK1	P32490	508 aa		6.15	□□□□□ -1.42
MIA40	YKL195W	TEF4	P36008	412 aa	Known RBP	6.15	□□□□□ -1.42
MIA40	YKL195W	BNA4	P38169	460 aa		6.15	□□□□□ -1.42
MIA40	YKL195W	ARN2	P38724	620 aa		6.15	□□□□□ -1.42
MIA40	YKL195W	SBE22	P38814	852 aa		6.15	□□□□□ -1.42
MIA40	YKL195W	DDI1	P40087	428 aa		6.15	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms