RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C RPN14P53196 417 aa3.3□□□□□ -1.88
VPS53YJL029C YSA1Q01976 231 aa3.3□□□□□ -1.88
VPS53YJL029C URC2Q04411 772 aa3.3□□□□□ -1.88
VPS53YJL029C YLL007CQ07799 665 aa3.3□□□□□ -1.88
VPS53YJL029C HNT3Q08702 217 aa3.3□□□□□ -1.88
VPS53YJL029C GCN1P33892 2672 aaKnown RBP3.29□□□□□ -1.88
VPS53YJL029C ATP6P00854 259 aa3.29□□□□□ -1.88
VPS53YJL029C ALG7P07286 448 aa3.29□□□□□ -1.88
VPS53YJL029C ATP7P30902 174 aa3.29□□□□□ -1.88
VPS53YJL029C SEC17P32602 292 aa3.29□□□□□ -1.88
VPS53YJL029C SIP2P34164 415 aaKnown RBP3.29□□□□□ -1.88
VPS53YJL029C TEF4P36008 412 aaKnown RBP3.29□□□□□ -1.88
VPS53YJL029C YKR073CP36153 106 aa3.29□□□□□ -1.88
VPS53YJL029C YBL029WP38201 376 aa3.29□□□□□ -1.88
VPS53YJL029C STP2P38704 541 aa3.29□□□□□ -1.88
VPS53YJL029C BAP3P41815 604 aa3.29□□□□□ -1.88
VPS53YJL029C IRC6P43615 237 aa3.29□□□□□ -1.88
VPS53YJL029C BNA3P47039 444 aaKnown RBP3.29□□□□□ -1.88
VPS53YJL029C STE24P47154 453 aa3.29□□□□□ -1.88
VPS53YJL029C YJR141WP47172 347 aaPredicted RBP3.29□□□□□ -1.88
VPS53YJL029C PDR16P53860 351 aaKnown RBP3.29□□□□□ -1.88
VPS53YJL029C PFA5Q03289 374 aa3.29□□□□□ -1.88
VPS53YJL029C NTG2Q08214 380 aa3.29□□□□□ -1.88
VPS53YJL029C SGT1Q08446 395 aa3.29□□□□□ -1.88
VPS53YJL029C FMP40Q08968 688 aaPredicted RBP3.29□□□□□ -1.88
VPS53YJL029C YKL018C-AQ3E7A7 99 aa3.29□□□□□ -1.88
VPS53YJL029C YBR056W-AI2HB52 66 aa3.29□□□□□ -1.88
VPS53YJL029C THI4P32318 326 aa3.29□□□□□ -1.88
VPS53YJL029C NUP2P32499 720 aa3.29□□□□□ -1.88
VPS53YJL029C TOA1P32773 286 aa3.29□□□□□ -1.88
VPS53YJL029C FES1P38260 290 aa3.29□□□□□ -1.88
VPS53YJL029C FMP52P40008 231 aa3.29□□□□□ -1.88
VPS53YJL029C LYS12P40495 371 aaKnown RBP3.29□□□□□ -1.88
VPS53YJL029C SHR5P41912 237 aa3.29□□□□□ -1.88
VPS53YJL029C BSC5P53755 489 aa3.29□□□□□ -1.88
VPS53YJL029C CUZ1P53899 274 aa3.29□□□□□ -1.88
VPS53YJL029C SUB1P54000 292 aaKnown RBP3.29□□□□□ -1.88
VPS53YJL029C PLM2Q04383 521 aa3.29□□□□□ -1.88
VPS53YJL029C DCR2Q05924 578 aa3.29□□□□□ -1.88
VPS53YJL029C YLR446WQ06204 433 aa3.29□□□□□ -1.88
VPS53YJL029C YDL218WQ07629 317 aa3.29□□□□□ -1.88
VPS53YJL029C YPR053CQ6Q5F3 151 aa3.29□□□□□ -1.88
VPS53YJL029C CDC9P04819 755 aa3.28□□□□□ -1.88
VPS53YJL029C CDC36P06100 191 aaPredicted RBP3.28□□□□□ -1.88
VPS53YJL029C UNG1P12887 359 aa3.28□□□□□ -1.88
VPS53YJL029C KSS1P14681 368 aa3.28□□□□□ -1.88
VPS53YJL029C ERD1P16151 362 aa3.28□□□□□ -1.88
VPS53YJL029C CLB3P24870 427 aa3.28□□□□□ -1.88
VPS53YJL029C SBA1P28707 216 aaKnown RBP3.28□□□□□ -1.88
VPS53YJL029C MKK1P32490 508 aa3.28□□□□□ -1.88
VPS53YJL029C IST2P38250 946 aa3.28□□□□□ -1.88
VPS53YJL029C UBP6P43593 499 aaKnown RBP3.28□□□□□ -1.88
VPS53YJL029C EMC2P47133 292 aaKnown RBP3.28□□□□□ -1.88
VPS53YJL029C YGR079WP53249 370 aa3.28□□□□□ -1.88
VPS53YJL029C PBP1P53297 722 aaKnown RBP3.28□□□□□ -1.88
VPS53YJL029C REX2P54964 269 aaKnown RBP3.28□□□□□ -1.88
VPS53YJL029C SKI8Q02793 397 aaPredicted RBP3.28□□□□□ -1.88
VPS53YJL029C FDC1Q03034 503 aa3.28□□□□□ -1.88
VPS53YJL029C CGI121Q03705 181 aaKnown RBP3.28□□□□□ -1.88
VPS53YJL029C CYK3Q07533 885 aa3.28□□□□□ -1.88
VPS53YJL029C MFG1Q07684 458 aa3.28□□□□□ -1.88
VPS53YJL029C PUS7Q08647 676 aaKnown RBP3.28□□□□□ -1.88
VPS53YJL029C TAD3Q9URQ3 322 aa3.28□□□□□ -1.88
VPS53YJL029C TPK2P06245 380 aa3.28□□□□□ -1.88
VPS53YJL029C YMR085WP0CF18 432 aa3.28□□□□□ -1.88
VPS53YJL029C THR1P17423 357 aaKnown RBP3.28□□□□□ -1.88
VPS53YJL029C PTR2P32901 601 aa3.28□□□□□ -1.88
VPS53YJL029C SWH1P35845 1188 aa3.28□□□□□ -1.88
VPS53YJL029C MRPL17P36528 281 aa3.28□□□□□ -1.88
VPS53YJL029C ROT2P38138 954 aa3.28□□□□□ -1.88
VPS53YJL029C TSC10P38342 320 aa3.28□□□□□ -1.88
VPS53YJL029C CIN4P39110 191 aa3.28□□□□□ -1.88
VPS53YJL029C SAP1P39955 897 aaKnown RBP3.28□□□□□ -1.88
VPS53YJL029C TED1P40533 473 aa3.28□□□□□ -1.88
VPS53YJL029C MNN5P46982 586 aa3.28□□□□□ -1.88
VPS53YJL029C UPF3P48412 387 aaKnown RBP3.28□□□□□ -1.88
VPS53YJL029C TOM22P49334 152 aa3.28□□□□□ -1.88
VPS53YJL029C MIG2P53035 382 aa3.28□□□□□ -1.88
VPS53YJL029C RHO5P53879 331 aaKnown RBP3.28□□□□□ -1.88
VPS53YJL029C IGO1P53897 168 aa3.28□□□□□ -1.88
VPS53YJL029C YKU80Q04437 629 aa3.28□□□□□ -1.88
VPS53YJL029C ERB1Q04660 807 aaKnown RBP3.28□□□□□ -1.88
VPS53YJL029C RRT8Q08219 342 aa3.28□□□□□ -1.88
VPS53YJL029C BSC1Q12140 328 aa3.28□□□□□ -1.88
VPS53YJL029C RPN6Q12377 434 aa3.28□□□□□ -1.88
VPS53YJL029C MTR10Q99189 972 aa3.28□□□□□ -1.88
VPS53YJL029C MRP10O75012 95 aa3.27□□□□□ -1.89
VPS53YJL029C SSA3P09435 649 aaKnown RBP3.27□□□□□ -1.89
VPS53YJL029C TY1A-LR4P0C2I8 440 aaKnown RBP3.27□□□□□ -1.89
VPS53YJL029C RPL20AP0CX23 172 aaKnown RBP3.27□□□□□ -1.89
VPS53YJL029C RPL20BP0CX24 172 aaPredicted RBP3.27□□□□□ -1.89
VPS53YJL029C TY1A-DR6P0CX70 440 aa3.27□□□□□ -1.89
VPS53YJL029C TY1A-ER1P0CX71 440 aa3.27□□□□□ -1.89
VPS53YJL029C TY1A-LR2P0CX72 440 aa3.27□□□□□ -1.89
VPS53YJL029C TY1A-PLP0CX73 440 aa3.27□□□□□ -1.89
VPS53YJL029C TY1A-JR1P0CX74 440 aa3.27□□□□□ -1.89
VPS53YJL029C TY1A-LR3P0CX75 440 aa3.27□□□□□ -1.89
VPS53YJL029C TY1A-ML2P0CX76 440 aa3.27□□□□□ -1.89
VPS53YJL029C CBS1P14066 229 aa3.27□□□□□ -1.89
VPS53YJL029C DBP3P20447 523 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms