RNA–Protein interactions for RNA: YIR039C

YPS6, Transcript of Putative GPI-anchored aspartic protease, yeastyeast

Gene YPS6, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPS6YIR039C SKO1Q02100 647 aa3.15□□□□□ -1.91
YPS6YIR039C YET2Q04210 160 aa3.15□□□□□ -1.91
YPS6YIR039C HEL2Q05580 639 aaKnown RBP3.15□□□□□ -1.91
YPS6YIR039C ATG26Q06321 1198 aa3.15□□□□□ -1.91
YPS6YIR039C BSP1Q06604 576 aa3.15□□□□□ -1.91
YPS6YIR039C SWC7Q06707 132 aa3.15□□□□□ -1.91
YPS6YIR039C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
YPS6YIR039C SLD7Q08457 257 aa3.15□□□□□ -1.91
YPS6YIR039C UAF30Q08747 228 aa3.15□□□□□ -1.91
YPS6YIR039C NCE102Q12207 173 aaRIP-Chip data3.15□□□□□ -1.91not detected
YPS6YIR039C YLR111WQ12528 110 aa3.15□□□□□ -1.91
YPS6YIR039C RGS2Q99188 309 aa3.15□□□□□ -1.91
YPS6YIR039C COX5AP00424 153 aa3.14□□□□□ -1.91
YPS6YIR039C RPL24AP04449 155 aaKnown RBP3.14□□□□□ -1.91
YPS6YIR039C HAP2P06774 265 aa3.14□□□□□ -1.91
YPS6YIR039C SPS4P09937 338 aa3.14□□□□□ -1.91
YPS6YIR039C RPL1AP0CX43 217 aaKnown RBP3.14□□□□□ -1.91
YPS6YIR039C RPL1BP0CX44 217 aaKnown RBP3.14□□□□□ -1.91
YPS6YIR039C RNA1P11745 407 aaKnown RBP3.14□□□□□ -1.91
YPS6YIR039C HSP26P15992 214 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
YPS6YIR039C EXO70P19658 623 aa3.14□□□□□ -1.91
YPS6YIR039C BEM1P29366 551 aa3.14□□□□□ -1.91
YPS6YIR039C PHA2P32452 334 aa3.14□□□□□ -1.91
YPS6YIR039C ASK1P35734 292 aa3.14□□□□□ -1.91
YPS6YIR039C NTC20P38302 140 aaPredicted RBP3.14□□□□□ -1.91
YPS6YIR039C UBA4P38820 440 aa3.14□□□□□ -1.91
YPS6YIR039C EDC3P39998 551 aaKnown RBP3.14□□□□□ -1.91
YPS6YIR039C ALK1P43633 760 aaKnown RBP3.14□□□□□ -1.91
YPS6YIR039C YGR149WP48236 432 aa3.14□□□□□ -1.91
YPS6YIR039C ASN2P49090 572 aaKnown RBP3.14□□□□□ -1.91
YPS6YIR039C YGL108CP53139 140 aa3.14□□□□□ -1.91
YPS6YIR039C EOS1P53938 366 aa3.14□□□□□ -1.91
YPS6YIR039C SLT2Q00772 484 aa3.14□□□□□ -1.91
YPS6YIR039C FMP30Q02883 468 aa3.14□□□□□ -1.91
YPS6YIR039C ACL4Q03771 387 aa3.14□□□□□ -1.91
YPS6YIR039C FMN1Q03778 218 aa3.14□□□□□ -1.91
YPS6YIR039C TVP15Q03860 143 aa3.14□□□□□ -1.91
YPS6YIR039C CSN9Q03981 162 aa3.14□□□□□ -1.91
YPS6YIR039C CDC123Q05791 360 aa3.14□□□□□ -1.91
YPS6YIR039C COS7Q07788 383 aa3.14□□□□□ -1.91
YPS6YIR039C APC5Q08683 685 aa3.14□□□□□ -1.91
YPS6YIR039C YPR202WQ08993 238 aa3.14□□□□□ -1.91
YPS6YIR039C YPR089WO13585 888 aa3.13□□□□□ -1.91
YPS6YIR039C COR1P07256 457 aa3.13□□□□□ -1.91
YPS6YIR039C NSP1P14907 823 aaKnown RBP3.13□□□□□ -1.91
YPS6YIR039C RAD14P28519 371 aa3.13□□□□□ -1.91
YPS6YIR039C SIP2P34164 415 aaKnown RBP3.13□□□□□ -1.91
YPS6YIR039C ATG12P38316 186 aa3.13□□□□□ -1.91
YPS6YIR039C FHL1P39521 936 aa3.13□□□□□ -1.91
YPS6YIR039C MBB1P39534 108 aa3.13□□□□□ -1.91
YPS6YIR039C SER3P40054 469 aa3.13□□□□□ -1.91
YPS6YIR039C SNG1P46950 547 aa3.13□□□□□ -1.91
YPS6YIR039C YJL132WP47014 750 aa3.13□□□□□ -1.91
YPS6YIR039C ECM27P47144 725 aa3.13□□□□□ -1.91
YPS6YIR039C BUD32P53323 261 aa3.13□□□□□ -1.91
YPS6YIR039C TRM112P53738 135 aaPredicted RBP3.13□□□□□ -1.91
YPS6YIR039C REX2P54964 269 aaKnown RBP3.13□□□□□ -1.91
YPS6YIR039C OSH6Q02201 448 aa3.13□□□□□ -1.91
YPS6YIR039C RLI1Q03195 608 aaKnown RBP3.13□□□□□ -1.91
YPS6YIR039C YDR476CQ03362 224 aa3.13□□□□□ -1.91
YPS6YIR039C RPN9Q04062 393 aaKnown RBP3.13□□□□□ -1.91
YPS6YIR039C FAR10Q06001 478 aa3.13□□□□□ -1.91
YPS6YIR039C DCI1Q08558 271 aa3.13□□□□□ -1.91
YPS6YIR039C NOT5Q12514 560 aaPredicted RBP3.13□□□□□ -1.91
YPS6YIR039C MAS1P10507 462 aa3.12□□□□□ -1.91
YPS6YIR039C GCY1P14065 312 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
YPS6YIR039C URA4P20051 364 aa3.12□□□□□ -1.91
YPS6YIR039C CLN1P20437 546 aa3.12□□□□□ -1.91
YPS6YIR039C SPS22P25380 463 aa3.12□□□□□ -1.91
YPS6YIR039C AFG1P32317 509 aa3.12□□□□□ -1.91
YPS6YIR039C SMI1P32566 505 aa3.12□□□□□ -1.91
YPS6YIR039C SLX1P38324 304 aa3.12□□□□□ -1.91
YPS6YIR039C YHR131CP38835 850 aa3.12□□□□□ -1.91
YPS6YIR039C RIX1P38883 763 aaPredicted RBP3.12□□□□□ -1.91
YPS6YIR039C YHR210CP38893 341 aa3.12□□□□□ -1.91
YPS6YIR039C POP2P39008 433 aa3.12□□□□□ -1.91
YPS6YIR039C FRT2P39734 528 aa3.12□□□□□ -1.91
YPS6YIR039C TOM22P49334 152 aa3.12□□□□□ -1.91
YPS6YIR039C AIF1P52923 378 aa3.12□□□□□ -1.91
YPS6YIR039C PNG1Q02890 363 aa3.12□□□□□ -1.91
YPS6YIR039C HER2Q03557 464 aa3.12□□□□□ -1.91
YPS6YIR039C ENT5Q03769 411 aaKnown RBP3.12□□□□□ -1.91
YPS6YIR039C INP2Q03824 705 aa3.12□□□□□ -1.91
YPS6YIR039C HPT1Q04178 221 aaKnown RBP3.12□□□□□ -1.91
YPS6YIR039C SWF1Q04629 336 aa3.12□□□□□ -1.91
YPS6YIR039C YOR365CQ08844 703 aa3.12□□□□□ -1.91
YPS6YIR039C UBX3Q12229 455 aa3.12□□□□□ -1.91
YPS6YIR039C OCA6Q12454 224 aa3.12□□□□□ -1.91
YPS6YIR039C GPH1P06738 902 aaKnown RBP3.11□□□□□ -1.91
YPS6YIR039C RHO2P06781 192 aa3.11□□□□□ -1.91
YPS6YIR039C GCD2P12754 651 aaPredicted RBP3.11□□□□□ -1.91
YPS6YIR039C CNA1P23287 553 aa3.11□□□□□ -1.91
YPS6YIR039C GEX1P25596 615 aa3.11□□□□□ -1.91
YPS6YIR039C BRF1P29056 596 aa3.11□□□□□ -1.91
YPS6YIR039C SIN4P32259 974 aa3.11□□□□□ -1.91
YPS6YIR039C RIM1P32445 135 aaKnown RBP3.11□□□□□ -1.91
YPS6YIR039C SPR1P32603 445 aa3.11□□□□□ -1.91
YPS6YIR039C PTC1P35182 281 aa3.11□□□□□ -1.91
YPS6YIR039C HMT1P38074 348 aa3.11□□□□□ -1.91
YPS6YIR039C ARA1P38115 344 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms