RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W GIS1Q03833 894 aa5.05□□□□□ -1.6
SPC97YHR172W SWM1Q12379 170 aa5.05□□□□□ -1.6
SPC97YHR172W COR1P07256 457 aa5.04□□□□□ -1.6
SPC97YHR172W PCT1P13259 424 aa5.04□□□□□ -1.6
SPC97YHR172W HPR1P17629 752 aaKnown RBP5.04□□□□□ -1.6
SPC97YHR172W IDH1P28834 360 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SPC97YHR172W INM1P38710 295 aa5.04□□□□□ -1.6
SPC97YHR172W MBB1P39534 108 aa5.04□□□□□ -1.6
SPC97YHR172W YGR168CP53293 376 aa5.04□□□□□ -1.6
SPC97YHR172W TEX1P53851 422 aaKnown RBP5.04□□□□□ -1.6
SPC97YHR172W WHI4Q07655 649 aaKnown RBP5.04□□□□□ -1.6
SPC97YHR172W SWI1P09547 1314 aa5.04□□□□□ -1.6
SPC97YHR172W COX1P00401 534 aa5.04□□□□□ -1.6
SPC97YHR172W MRP1P10662 321 aaKnown RBP5.04□□□□□ -1.6
SPC97YHR172W POX1P13711 748 aa5.04□□□□□ -1.6
SPC97YHR172W YMR31P19955 123 aa5.04□□□□□ -1.6
SPC97YHR172W DBR1P24309 405 aaKnown RBP5.04□□□□□ -1.6
SPC97YHR172W NDC1P32500 655 aa5.04□□□□□ -1.6
SPC97YHR172W SSO1P32867 290 aa5.04□□□□□ -1.6
SPC97YHR172W RPL32P38061 130 aaKnown RBP5.04□□□□□ -1.6
SPC97YHR172W HMT1P38074 348 aa5.04□□□□□ -1.6
SPC97YHR172W TRM5P38793 499 aa5.04□□□□□ -1.6
SPC97YHR172W COA1P40452 197 aa5.04□□□□□ -1.6
SPC97YHR172W APM1Q00776 475 aaPredicted RBP5.04□□□□□ -1.6
SPC97YHR172W MSC1Q03104 513 aa5.04□□□□□ -1.6
SPC97YHR172W CTK1Q03957 528 aaKnown RBP5.04□□□□□ -1.6
SPC97YHR172W YMR087WQ04299 284 aa5.04□□□□□ -1.6
SPC97YHR172W MUM3Q08750 479 aa5.04□□□□□ -1.6
SPC97YHR172W FSH3Q99369 266 aa5.04□□□□□ -1.6
SPC97YHR172W AI5_ALPHAQ9ZZX1 630 aa5.04□□□□□ -1.6
SPC97YHR172W RAV1P47104 1357 aa5.03□□□□□ -1.6
SPC97YHR172W PGK1P00560 416 aaKnown RBP5.03□□□□□ -1.6
SPC97YHR172W DSF1P0CX08 502 aa5.03□□□□□ -1.6
SPC97YHR172W YNR073CP0CX09 502 aa5.03□□□□□ -1.6
SPC97YHR172W KGD2P19262 463 aaPredicted RBP5.03□□□□□ -1.6
SPC97YHR172W CKI1P20485 582 aa5.03□□□□□ -1.6
SPC97YHR172W RNR3P21672 869 aaKnown RBP5.03□□□□□ -1.6
SPC97YHR172W CDC20P26309 610 aa5.03□□□□□ -1.6
SPC97YHR172W STE14P32584 239 aa5.03□□□□□ -1.6
SPC97YHR172W CSE1P33307 960 aa5.03□□□□□ -1.6
SPC97YHR172W YKL162CP36052 402 aa5.03□□□□□ -1.6
SPC97YHR172W SHC1P39000 512 aa5.03□□□□□ -1.6
SPC97YHR172W PHB1P40961 287 aa5.03□□□□□ -1.6
SPC97YHR172W IRC7P43623 340 aa5.03□□□□□ -1.6
SPC97YHR172W CLA4P48562 842 aa5.03□□□□□ -1.6
SPC97YHR172W YDR109CQ04585 715 aa5.03□□□□□ -1.6
SPC97YHR172W RPS24AP0CX31 135 aaKnown RBP5.03□□□□□ -1.6
SPC97YHR172W RPS24BP0CX32 135 aaKnown RBP5.03□□□□□ -1.6
SPC97YHR172W CLN3P13365 580 aa5.03□□□□□ -1.6
SPC97YHR172W ZUO1P32527 433 aaKnown RBP5.03□□□□□ -1.6
SPC97YHR172W URA8P38627 578 aaPredicted RBP5.03□□□□□ -1.6
SPC97YHR172W OSH3P38713 996 aaKnown RBP5.03□□□□□ -1.6
SPC97YHR172W SRP14P38985 146 aa5.03□□□□□ -1.6
SPC97YHR172W JLP2P40206 208 aa5.03□□□□□ -1.6
SPC97YHR172W BTT1P40314 149 aaPredicted RBP5.03□□□□□ -1.6
SPC97YHR172W ZRG17P53735 605 aa5.03□□□□□ -1.6
SPC97YHR172W PRP38Q00723 242 aaPredicted RBP5.03□□□□□ -1.6
SPC97YHR172W YMR178WQ03219 274 aaKnown RBP5.03□□□□□ -1.6
SPC97YHR172W PEX10Q05568 337 aa5.03□□□□□ -1.6
SPC97YHR172W SNF8Q12483 233 aa5.03□□□□□ -1.6
SPC97YHR172W CTR86P25355 563 aa5.02□□□□□ -1.61
SPC97YHR172W CHA1P25379 360 aaKnown RBP5.02□□□□□ -1.61
SPC97YHR172W NAM9P27929 486 aa5.02□□□□□ -1.61
SPC97YHR172W ASH1P34233 588 aa5.02□□□□□ -1.61
SPC97YHR172W VPS21P36017 210 aaKnown RBP5.02□□□□□ -1.61
SPC97YHR172W TSC10P38342 320 aa5.02□□□□□ -1.61
SPC97YHR172W MTL1P53214 551 aa5.02□□□□□ -1.61
SPC97YHR172W KTR5P53966 522 aaPredicted RBP5.02□□□□□ -1.61
SPC97YHR172W BER1Q06688 274 aaKnown RBP5.02□□□□□ -1.61
SPC97YHR172W PPR1P07272 904 aaPredicted RBP5.02□□□□□ -1.61
SPC97YHR172W CNE1P27825 502 aa5.02□□□□□ -1.61
SPC97YHR172W CDC13P32797 924 aaKnown RBP5.02□□□□□ -1.61
SPC97YHR172W BCS1P32839 456 aa5.02□□□□□ -1.61
SPC97YHR172W SOR1P35497 357 aaKnown RBP5.02□□□□□ -1.61
SPC97YHR172W YER184CP39961 794 aa5.02□□□□□ -1.61
SPC97YHR172W LCP5P40079 357 aaPredicted RBP5.02□□□□□ -1.61
SPC97YHR172W YFR020WP43600 232 aa5.02□□□□□ -1.61
SPC97YHR172W YNL140CP53910 189 aa5.02□□□□□ -1.61
SPC97YHR172W YPD1Q07688 167 aa5.02□□□□□ -1.61
SPC97YHR172W SOR2Q07786 357 aa5.02□□□□□ -1.61
SPC97YHR172W YPR022CQ12139 1133 aa5.02□□□□□ -1.61
SPC97YHR172W FRE7Q12333 620 aa5.02□□□□□ -1.61
SPC97YHR172W NOT5Q12514 560 aaPredicted RBP5.02□□□□□ -1.61
SPC97YHR172W HIS5P07172 385 aa5.01□□□□□ -1.61
SPC97YHR172W PDC5P16467 563 aaKnown RBP5.01□□□□□ -1.61
SPC97YHR172W RFA3P26755 122 aaKnown RBP5.01□□□□□ -1.61
SPC97YHR172W PRP21P32524 280 aaPredicted RBP5.01□□□□□ -1.61
SPC97YHR172W CDC5P32562 705 aa5.01□□□□□ -1.61
SPC97YHR172W CPR5P35176 225 aa5.01□□□□□ -1.61
SPC97YHR172W RRP4P38792 359 aaKnown RBP5.01□□□□□ -1.61
SPC97YHR172W HAT2P39984 401 aa5.01□□□□□ -1.61
SPC97YHR172W URM1P40554 99 aaPredicted RBP5.01□□□□□ -1.61
SPC97YHR172W LYS5P50113 272 aa5.01□□□□□ -1.61
SPC97YHR172W YGL204CP53089 101 aa5.01□□□□□ -1.61
SPC97YHR172W BIO4P53630 237 aa5.01□□□□□ -1.61
SPC97YHR172W NRG1Q03125 231 aa5.01□□□□□ -1.61
SPC97YHR172W YET3Q07451 203 aa5.01□□□□□ -1.61
SPC97YHR172W YDR461C-AQ2V2P7 80 aa5.01□□□□□ -1.61
SPC97YHR172W CNA1P23287 553 aa5.01□□□□□ -1.61
SPC97YHR172W PPZ1P26570 692 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms