RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W ABP140Q08641 628 aaKnown RBP2.78□□□□□ -1.96
PRE1YER012W RCN2Q12044 265 aa2.78□□□□□ -1.96
PRE1YER012W YLR108CQ12259 485 aa2.78□□□□□ -1.96
PRE1YER012W POL2P21951 2222 aaKnown RBP2.78□□□□□ -1.96
PRE1YER012W PET123P17558 318 aa2.77□□□□□ -1.97
PRE1YER012W PRP2P20095 876 aaPredicted RBP2.77□□□□□ -1.97
PRE1YER012W TKL2P33315 681 aa2.77□□□□□ -1.97
PRE1YER012W TCD2P36101 447 aaKnown RBP2.77□□□□□ -1.97
PRE1YER012W RFT1P38206 574 aaPredicted RBP2.77□□□□□ -1.97
PRE1YER012W MBB1P39534 108 aa2.77□□□□□ -1.97
PRE1YER012W AVT2P39981 480 aa2.77□□□□□ -1.97
PRE1YER012W DSE1P40077 573 aa2.77□□□□□ -1.97
PRE1YER012W ERG10P41338 398 aaKnown RBP2.77□□□□□ -1.97
PRE1YER012W FYV8P46949 817 aaKnown RBP2.77□□□□□ -1.97
PRE1YER012W SRB7P47822 140 aa2.77□□□□□ -1.97
PRE1YER012W HRI1Q05905 244 aaKnown RBP2.77□□□□□ -1.97
PRE1YER012W YEH1Q07804 573 aa2.77□□□□□ -1.97
PRE1YER012W NSE1Q07913 336 aa2.77□□□□□ -1.97
PRE1YER012W YPL199CQ08954 240 aa2.77□□□□□ -1.97
PRE1YER012W GPM2Q12008 311 aa2.77□□□□□ -1.97
PRE1YER012W VPS54Q12071 889 aa2.77□□□□□ -1.97
PRE1YER012W UBR1P19812 1950 aa2.77□□□□□ -1.97
PRE1YER012W SEC63P14906 663 aa2.76□□□□□ -1.97
PRE1YER012W CKA1P15790 372 aa2.76□□□□□ -1.97
PRE1YER012W VPS3P23643 1011 aa2.76□□□□□ -1.97
PRE1YER012W DAL2P25335 343 aa2.76□□□□□ -1.97
PRE1YER012W YCR100CP25606 316 aa2.76□□□□□ -1.97
PRE1YER012W PAP1P29468 568 aaKnown RBP2.76□□□□□ -1.97
PRE1YER012W VPH1P32563 840 aaKnown RBP2.76□□□□□ -1.97
PRE1YER012W MFT1P33441 392 aaKnown RBP2.76□□□□□ -1.97
PRE1YER012W YEL075CP39972 122 aa2.76□□□□□ -1.97
PRE1YER012W CHS6P40955 746 aa2.76□□□□□ -1.97
PRE1YER012W RTC4P53850 401 aa2.76□□□□□ -1.97
PRE1YER012W DON1Q05610 365 aa2.76□□□□□ -1.97
PRE1YER012W YDR278CQ05612 105 aa2.76□□□□□ -1.97
PRE1YER012W SGT2Q12118 346 aaKnown RBP2.76□□□□□ -1.97
PRE1YER012W GIS3Q12418 502 aa2.76□□□□□ -1.97
PRE1YER012W RPS8AP0CX39 200 aaKnown RBP2.75□□□□□ -1.97
PRE1YER012W RPS8BP0CX40 200 aaKnown RBP2.75□□□□□ -1.97
PRE1YER012W SWI3P32591 825 aa2.75□□□□□ -1.97
PRE1YER012W RML2P32611 393 aa2.75□□□□□ -1.97
PRE1YER012W SDH3P33421 198 aa2.75□□□□□ -1.97
PRE1YER012W PAN6P40459 309 aa2.75□□□□□ -1.97
PRE1YER012W SHY1P53266 389 aa2.75□□□□□ -1.97
PRE1YER012W TRM112P53738 135 aaPredicted RBP2.75□□□□□ -1.97
PRE1YER012W HAL1Q01766 294 aa2.75□□□□□ -1.97
PRE1YER012W YLR287CQ05881 355 aa2.75□□□□□ -1.97
PRE1YER012W DIS3Q08162 1001 aaKnown RBP2.75□□□□□ -1.97
PRE1YER012W DDC1Q08949 612 aa2.75□□□□□ -1.97
PRE1YER012W YJR112W-AQ3E743 109 aa2.75□□□□□ -1.97
PRE1YER012W AI5_BETAQ9ZZX0 354 aa2.75□□□□□ -1.97
PRE1YER012W HFA1P32874 2273 aa2.75□□□□□ -1.97
PRE1YER012W MSF1P08425 469 aa2.74□□□□□ -1.97
PRE1YER012W RED1P14291 827 aa2.74□□□□□ -1.97
PRE1YER012W ROX1P25042 368 aa2.74□□□□□ -1.97
PRE1YER012W OCA4P25366 362 aa2.74□□□□□ -1.97
PRE1YER012W GPI10P30777 616 aa2.74□□□□□ -1.97
PRE1YER012W ERG3P32353 365 aa2.74□□□□□ -1.97
PRE1YER012W YET1P35723 206 aa2.74□□□□□ -1.97
PRE1YER012W PRM5P40476 318 aa2.74□□□□□ -1.97
PRE1YER012W MET28P40573 187 aa2.74□□□□□ -1.97
PRE1YER012W ARF3P40994 183 aaRIP-Chip data2.74□□□□□ -1.97not detected
PRE1YER012W TRS85P46944 698 aa2.74□□□□□ -1.97
PRE1YER012W YGR250CP53316 781 aaKnown RBP2.74□□□□□ -1.97
PRE1YER012W MZM1Q03429 123 aaPredicted RBP2.74□□□□□ -1.97
PRE1YER012W EBS1Q03466 884 aaKnown RBP2.74□□□□□ -1.97
PRE1YER012W VPS38Q05919 439 aa2.74□□□□□ -1.97
PRE1YER012W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
PRE1YER012W RLP24Q07915 199 aaKnown RBP2.74□□□□□ -1.97
PRE1YER012W SPE3Q12074 293 aaKnown RBP2.74□□□□□ -1.97
PRE1YER012W DDP1Q99321 188 aaKnown RBP2.74□□□□□ -1.97
PRE1YER012W FUR1P18562 216 aaKnown RBP2.73□□□□□ -1.97
PRE1YER012W FPR1P20081 114 aaKnown RBP2.73□□□□□ -1.97
PRE1YER012W EFB1P32471 206 aaKnown RBP2.73□□□□□ -1.97
PRE1YER012W GYP6P32806 458 aa2.73□□□□□ -1.97
PRE1YER012W CSG2P35206 410 aa2.73□□□□□ -1.97
PRE1YER012W MIX23P38162 196 aa2.73□□□□□ -1.97
PRE1YER012W MSG5P38590 489 aa2.73□□□□□ -1.97
PRE1YER012W HEM14P40012 539 aa2.73□□□□□ -1.97
PRE1YER012W YER189WP40104 122 aa2.73□□□□□ -1.97
PRE1YER012W MET18P40469 1032 aa2.73□□□□□ -1.97
PRE1YER012W NOP13P53883 403 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
PRE1YER012W IBD2P53892 351 aa2.73□□□□□ -1.97
PRE1YER012W GIR2Q03768 265 aaPredicted RBP2.73□□□□□ -1.97
PRE1YER012W YDR239CQ03780 787 aa2.73□□□□□ -1.97
PRE1YER012W YMR155WQ03795 547 aa2.73□□□□□ -1.97
PRE1YER012W TSA2Q04120 196 aa2.73□□□□□ -1.97
PRE1YER012W SPG3Q04398 127 aaPredicted RBP2.73□□□□□ -1.97
PRE1YER012W YLR297WQ05899 129 aa2.73□□□□□ -1.97
PRE1YER012W SCM3Q12334 223 aa2.73□□□□□ -1.97
PRE1YER012W WTM1Q12363 437 aaKnown RBP2.73□□□□□ -1.97
PRE1YER012W EMP46Q12396 444 aa2.73□□□□□ -1.97
PRE1YER012W RTN2Q12443 393 aa2.73□□□□□ -1.97
PRE1YER012W YOL159C-AQ3E769 90 aa2.73□□□□□ -1.97
PRE1YER012W PAB1P04147 577 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97 RIP-Chip
PRE1YER012W YAR066WP0CX18 203 aa2.72□□□□□ -1.97
PRE1YER012W YHR214WP0CX19 203 aa2.72□□□□□ -1.97
PRE1YER012W NFU1P32860 256 aa2.72□□□□□ -1.97
PRE1YER012W STB6P36085 766 aa2.72□□□□□ -1.97
PRE1YER012W YPT35P38815 214 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 83.2 ms