RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 TRAPPC10P48553 1259 aa22.59■■□□□ 1.21
SSBP4-210ENST00000601444 RBL2Q08999 1139 aa22.59■■□□□ 1.21
SSBP4-210ENST00000601444 GPNMBQ14956 572 aa22.59■■□□□ 1.21
SSBP4-210ENST00000601444 HABP4Q5JVS0 413 aaKnown RBP22.59■■□□□ 1.21
SSBP4-210ENST00000601444 NCAPH2Q6IBW4 605 aa22.59■■□□□ 1.21
SSBP4-210ENST00000601444 TRAF7Q6Q0C0 670 aa22.59■■□□□ 1.21
SSBP4-210ENST00000601444 TDHQ8IZJ6 230 aa22.59■■□□□ 1.21
SSBP4-210ENST00000601444 TTC12Q9H892 705 aaPredicted RBP22.59■■□□□ 1.21
SSBP4-210ENST00000601444 TUBE1Q9UJT0 475 aa22.59■■□□□ 1.21
SSBP4-210ENST00000601444 VPS37CA5D8V6 355 aaPredicted RBP22.58■■□□□ 1.21
SSBP4-210ENST00000601444 RRN3P2A6NIE6 340 aa22.58■■□□□ 1.21
SSBP4-210ENST00000601444 SELPP16109 830 aa22.58■■□□□ 1.21
SSBP4-210ENST00000601444 SYT1P21579 422 aa22.58■■□□□ 1.21
SSBP4-210ENST00000601444 PRKCEQ02156 737 aa22.58■■□□□ 1.21
SSBP4-210ENST00000601444 PPIGQ13427 754 aaKnown RBP eCLIP22.58■■□□□ 1.212e-7■■■■□ 19.5
SSBP4-210ENST00000601444 LRRC8DQ7L1W4 858 aa22.58■■□□□ 1.21
SSBP4-210ENST00000601444 DEFB128Q7Z7B8 93 aa22.58■■□□□ 1.21
SSBP4-210ENST00000601444 CCDC155Q8N6L0 562 aa22.58■■□□□ 1.21
SSBP4-210ENST00000601444 C4orf32Q8N8J7 132 aa22.58■■□□□ 1.21
SSBP4-210ENST00000601444 BBXQ8WY36 941 aaPredicted RBP22.58■■□□□ 1.21
SSBP4-210ENST00000601444 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.58■■□□□ 1.214e-8■□□□□ 9.4
SSBP4-210ENST00000601444 IL23AQ9NPF7 189 aa22.58■■□□□ 1.21
SSBP4-210ENST00000601444 TMEM150BA6NC51 233 aa22.57■■□□□ 1.2
SSBP4-210ENST00000601444 STBD1O95210 358 aa22.57■■□□□ 1.2
SSBP4-210ENST00000601444 TMEM240Q5SV17 173 aa22.57■■□□□ 1.2
SSBP4-210ENST00000601444 FERMT3Q86UX7 667 aa22.57■■□□□ 1.2
SSBP4-210ENST00000601444 SPRYD3Q8NCJ5 442 aa22.57■■□□□ 1.2
SSBP4-210ENST00000601444 OSBPL7Q9BZF2 842 aa22.57■■□□□ 1.2
SSBP4-210ENST00000601444 RGL1Q9NZL6 768 aa22.57■■□□□ 1.2
SSBP4-210ENST00000601444 WRAP73Q9P2S5 460 aaPredicted RBP22.57■■□□□ 1.2
SSBP4-210ENST00000601444 OATP04181 439 aa22.56■■□□□ 1.2
SSBP4-210ENST00000601444 CTSHP09668 335 aa22.56■■□□□ 1.2
SSBP4-210ENST00000601444 KLRC1P26715 233 aa22.56■■□□□ 1.2
SSBP4-210ENST00000601444 MBTPS1Q14703 1052 aa22.56■■□□□ 1.2
SSBP4-210ENST00000601444 EPHA7Q15375 998 aa22.56■■□□□ 1.2
SSBP4-210ENST00000601444 MTHFD1LQ6UB35 978 aa22.56■■□□□ 1.2
SSBP4-210ENST00000601444 ZNF365Q70YC5 407 aa22.56■■□□□ 1.2
SSBP4-210ENST00000601444 DNAJB3Q8WWF6 145 aa22.56■■□□□ 1.2
SSBP4-210ENST00000601444 TNPO1Q92973 898 aaKnown RBP22.56■■□□□ 1.2
SSBP4-210ENST00000601444 SH2D3AQ9BRG2 576 aa22.56■■□□□ 1.2
SSBP4-210ENST00000601444 POTEMA6NI47 508 aa22.55■■□□□ 1.2
SSBP4-210ENST00000601444 OR52Z1P0C646 297 aa22.55■■□□□ 1.2
SSBP4-210ENST00000601444 PDCP20941 246 aa22.55■■□□□ 1.2
SSBP4-210ENST00000601444 TECP42680 631 aa22.55■■□□□ 1.2
SSBP4-210ENST00000601444 ORC2Q13416 577 aaPredicted RBP22.55■■□□□ 1.2
SSBP4-210ENST00000601444 ZNF484Q5JVG2 852 aa22.55■■□□□ 1.2
SSBP4-210ENST00000601444 DYDC2Q96IM9 177 aa22.55■■□□□ 1.2
SSBP4-210ENST00000601444 FAM49AQ9H0Q0 323 aaPredicted RBP22.55■■□□□ 1.2
SSBP4-210ENST00000601444 A0A1W2PPC1 479 aa22.54■■□□□ 1.2
SSBP4-210ENST00000601444 RSPH10B2B2RC85 870 aa22.54■■□□□ 1.2
SSBP4-210ENST00000601444 NBNO60934 754 aa22.54■■□□□ 1.2
SSBP4-210ENST00000601444 RSPH10BP0C881 870 aa22.54■■□□□ 1.2
SSBP4-210ENST00000601444 PSMC5P62195 406 aa22.54■■□□□ 1.2
SSBP4-210ENST00000601444 CYP4A11Q02928 519 aa22.54■■□□□ 1.2
SSBP4-210ENST00000601444 PTGDRQ13258 359 aa22.54■■□□□ 1.2
SSBP4-210ENST00000601444 CTTNQ14247 550 aaKnown RBP22.54■■□□□ 1.2
SSBP4-210ENST00000601444 RILPL1Q5EBL4 403 aa22.54■■□□□ 1.2
SSBP4-210ENST00000601444 TAF2Q6P1X5 1199 aa22.54■■□□□ 1.2
SSBP4-210ENST00000601444 FAM167AQ96KS9 214 aa22.54■■□□□ 1.2
SSBP4-210ENST00000601444 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.54■■□□□ 1.2
SSBP4-210ENST00000601444 NRBP2Q9NSY0 501 aa22.54■■□□□ 1.2
SSBP4-210ENST00000601444 PCDHA2Q9Y5H9 948 aa22.54■■□□□ 1.2
SSBP4-210ENST00000601444 SCN5AQ14524 2016 aa22.53■■□□□ 1.2
SSBP4-210ENST00000601444 COL1A2P08123 1366 aa22.53■■□□□ 1.2
SSBP4-210ENST00000601444 DDX11L8A8MPP1 907 aa22.53■■□□□ 1.2
SSBP4-210ENST00000601444 SLITRK3O94933 977 aa22.53■■□□□ 1.2
SSBP4-210ENST00000601444 C22orf31O95567 290 aa22.53■■□□□ 1.2
SSBP4-210ENST00000601444 FGBP02675 491 aa22.53■■□□□ 1.2
SSBP4-210ENST00000601444 P4HBP07237 508 aaKnown RBP22.53■■□□□ 1.2
SSBP4-210ENST00000601444 QARSP47897 775 aaKnown RBP22.53■■□□□ 1.2
SSBP4-210ENST00000601444 TCTN1Q2MV58 587 aa22.53■■□□□ 1.2
SSBP4-210ENST00000601444 OTOP2Q7RTS6 562 aa22.53■■□□□ 1.2
SSBP4-210ENST00000601444 RPUSD2Q8IZ73 545 aaKnown RBP22.53■■□□□ 1.2
SSBP4-210ENST00000601444 EIF2AK1Q9BQI3 630 aaKnown RBP22.53■■□□□ 1.2
SSBP4-210ENST00000601444 LXNQ9BS40 222 aa22.53■■□□□ 1.2
SSBP4-210ENST00000601444 SEPT9Q9UHD8 586 aaPredicted RBP22.53■■□□□ 1.2
SSBP4-210ENST00000601444 MTMR6Q9Y217 621 aa22.53■■□□□ 1.2
SSBP4-210ENST00000601444 ZBTB39O15060 712 aa22.52■■□□□ 1.2
SSBP4-210ENST00000601444 CHRNA1P02708 482 aa22.52■■□□□ 1.2
SSBP4-210ENST00000601444 HSP90AA1P07900 732 aaKnown RBP22.52■■□□□ 1.2
SSBP4-210ENST00000601444 RFC2P35250 354 aa22.52■■□□□ 1.2
SSBP4-210ENST00000601444 TMEM62Q0P6H9 643 aa22.52■■□□□ 1.2
SSBP4-210ENST00000601444 IL17AQ16552 155 aa22.52■■□□□ 1.2
SSBP4-210ENST00000601444 XKR3Q5GH77 459 aa22.52■■□□□ 1.2
SSBP4-210ENST00000601444 ANO5Q75V66 913 aa22.52■■□□□ 1.2
SSBP4-210ENST00000601444 RPAINQ86UA6 219 aa22.52■■□□□ 1.2
SSBP4-210ENST00000601444 RNPC3Q96LT9 517 aaKnown RBP22.52■■□□□ 1.2
SSBP4-210ENST00000601444 HSD17B14Q9BPX1 270 aa22.52■■□□□ 1.2
SSBP4-210ENST00000601444 NIFKQ9BYG3 293 aaKnown RBP22.52■■□□□ 1.2
SSBP4-210ENST00000601444 FTOQ9C0B1 505 aaKnown RBP eCLIP22.52■■□□□ 1.2
SSBP4-210ENST00000601444 TANC1Q9C0D5 1861 aa22.51■■□□□ 1.19
SSBP4-210ENST00000601444 WDR81Q562E7 1941 aa22.51■■□□□ 1.19
SSBP4-210ENST00000601444 SMIM35A0A1B0GVV1 85 aa22.51■■□□□ 1.19
SSBP4-210ENST00000601444 SOX1O00570 391 aaPredicted RBP22.51■■□□□ 1.19
SSBP4-210ENST00000601444 STX6O43752 255 aa22.51■■□□□ 1.19
SSBP4-210ENST00000601444 RESTQ13127 1097 aa22.51■■□□□ 1.19
SSBP4-210ENST00000601444 TARBP2Q15633 366 aaKnown RBP22.51■■□□□ 1.19
SSBP4-210ENST00000601444 MTERF2Q49AM1 385 aa22.51■■□□□ 1.19
SSBP4-210ENST00000601444 FAM26DQ5JW98 314 aa22.51■■□□□ 1.19
SSBP4-210ENST00000601444 PLA2G4FQ68DD2 849 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms