RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 FAM109BQ6ICB4 259 aaPredicted RBP18.11■□□□□ 0.49
RETREG3-206ENST00000588423 MIER3Q7Z3K6 550 aa18.11■□□□□ 0.49
RETREG3-206ENST00000588423 RSPH3Q86UC2 560 aa18.11■□□□□ 0.49
RETREG3-206ENST00000588423 SLFN12Q8IYM2 578 aa18.11■□□□□ 0.49
RETREG3-206ENST00000588423 GJA10Q969M2 543 aa18.11■□□□□ 0.49
RETREG3-206ENST00000588423 FTOQ9C0B1 505 aaKnown RBP eCLIP18.11■□□□□ 0.495e-9■■■■□ 21.6
RETREG3-206ENST00000588423 PCDHA2Q9Y5H9 948 aa18.11■□□□□ 0.49
RETREG3-206ENST00000588423 CHMP2AO43633 222 aa18.1■□□□□ 0.49
RETREG3-206ENST00000588423 BAG4O95429 457 aaKnown RBP18.1■□□□□ 0.49
RETREG3-206ENST00000588423 SLC34A2O95436 690 aa18.1■□□□□ 0.49
RETREG3-206ENST00000588423 IGBP1P78318 339 aa18.1■□□□□ 0.49
RETREG3-206ENST00000588423 MBTPS1Q14703 1052 aa18.1■□□□□ 0.49
RETREG3-206ENST00000588423 CNKSR3Q6P9H4 555 aa18.1■□□□□ 0.49
RETREG3-206ENST00000588423 RUFY4Q6ZNE9 571 aa18.1■□□□□ 0.49
RETREG3-206ENST00000588423 POTEDQ86YR6 584 aa18.1■□□□□ 0.49
RETREG3-206ENST00000588423 CKAP2LQ8IYA6 745 aa18.1■□□□□ 0.49
RETREG3-206ENST00000588423 HAS1Q92839 578 aa18.1■□□□□ 0.49
RETREG3-206ENST00000588423 CXXC1Q9P0U4 656 aaPredicted RBP18.1■□□□□ 0.49
RETREG3-206ENST00000588423 VAV3Q9UKW4 847 aa18.1■□□□□ 0.49
RETREG3-206ENST00000588423 CEP131Q9UPN4 1083 aa18.1■□□□□ 0.49
RETREG3-206ENST00000588423 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.1■□□□□ 0.49
RETREG3-206ENST00000588423 SMIM35A0A1B0GVV1 85 aa18.09■□□□□ 0.49
RETREG3-206ENST00000588423 ZBTB42B2RXF5 422 aa18.09■□□□□ 0.49
RETREG3-206ENST00000588423 ORC2Q13416 577 aaPredicted RBP18.09■□□□□ 0.49
RETREG3-206ENST00000588423 MTHFD1LQ6UB35 978 aa18.09■□□□□ 0.49
RETREG3-206ENST00000588423 SLC4A7Q9Y6M7 1214 aa18.09■□□□□ 0.49
RETREG3-206ENST00000588423 SCN5AQ14524 2016 aa18.08■□□□□ 0.49
RETREG3-206ENST00000588423 TRIP12Q14669 1992 aaPredicted RBP18.08■□□□□ 0.49
RETREG3-206ENST00000588423 TMEM265A0A087WTH1 108 aa18.08■□□□□ 0.48
RETREG3-206ENST00000588423 ZNF862O60290 1169 aa18.08■□□□□ 0.48
RETREG3-206ENST00000588423 MARCH6O60337 910 aa18.08■□□□□ 0.48
RETREG3-206ENST00000588423 EFCAB14O75071 495 aa18.08■□□□□ 0.48
RETREG3-206ENST00000588423 OATP04181 439 aa18.08■□□□□ 0.48
RETREG3-206ENST00000588423 U2AF2P26368 475 aaKnown RBP eCLIP18.08■□□□□ 0.488e-7■■■■□ 26.3
RETREG3-206ENST00000588423 MGAT3Q09327 533 aa18.08■□□□□ 0.48
RETREG3-206ENST00000588423 NOSTRINQ8IVI9 506 aa18.08■□□□□ 0.48
RETREG3-206ENST00000588423 NME8Q8N427 588 aa18.08■□□□□ 0.48
RETREG3-206ENST00000588423 PHOSPHO2Q8TCD6 241 aa18.08■□□□□ 0.48
RETREG3-206ENST00000588423 TRAPPC12Q8WVT3 735 aa18.08■□□□□ 0.48
RETREG3-206ENST00000588423 DNAJB3Q8WWF6 145 aa18.08■□□□□ 0.48
RETREG3-206ENST00000588423 NRBP2Q9NSY0 501 aa18.08■□□□□ 0.48
RETREG3-206ENST00000588423 LAMA3Q16787 3333 aa18.08■□□□□ 0.48
RETREG3-206ENST00000588423 ABHD14A-ACY1A0A1B0GW23 586 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 ZBBXA8MT70 800 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 NEMFO60524 1076 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 CTSHP09668 335 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 KLRC1P26715 233 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 GJB2P29033 226 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 TRAPPC10P48553 1259 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 PRKCEQ02156 737 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 CUL4AQ13619 759 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 GNL2Q13823 731 aaKnown RBP18.07■□□□□ 0.48
RETREG3-206ENST00000588423 CALCRLQ16602 461 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 UGCGQ16739 394 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 PLEKHG4Q58EX7 1191 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 IER5Q5VY09 327 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 SLC9A7Q96T83 725 aa18.07■□□□□ 0.48
RETREG3-206ENST00000588423 WNT7AO00755 349 aa18.06■□□□□ 0.48
RETREG3-206ENST00000588423 MAGEB2O15479 319 aa18.06■□□□□ 0.48
RETREG3-206ENST00000588423 DKC1O60832 514 aaKnown RBP eCLIP18.06■□□□□ 0.48
RETREG3-206ENST00000588423 C22orf31O95567 290 aa18.06■□□□□ 0.48
RETREG3-206ENST00000588423 CHRNA1P02708 482 aa18.06■□□□□ 0.48
RETREG3-206ENST00000588423 ATP2A2P16615 1042 aaKnown RBP18.06■□□□□ 0.48
RETREG3-206ENST00000588423 PSMC5P62195 406 aa18.06■□□□□ 0.48
RETREG3-206ENST00000588423 MRPS6P82932 125 aaKnown RBP18.06■□□□□ 0.48
RETREG3-206ENST00000588423 SPIRE1Q08AE8 756 aa18.06■□□□□ 0.48
RETREG3-206ENST00000588423 IKBKEQ14164 716 aa18.06■□□□□ 0.48
RETREG3-206ENST00000588423 XKR3Q5GH77 459 aa18.06■□□□□ 0.48
RETREG3-206ENST00000588423 APBB2Q92870 758 aa18.06■□□□□ 0.48
RETREG3-206ENST00000588423 ZBTB10Q96DT7 871 aa18.06■□□□□ 0.48
RETREG3-206ENST00000588423 MTMR9Q96QG7 549 aa18.06■□□□□ 0.48
RETREG3-206ENST00000588423 NIFKQ9BYG3 293 aaKnown RBP18.06■□□□□ 0.48
RETREG3-206ENST00000588423 SMC3Q9UQE7 1217 aa18.06■□□□□ 0.48
RETREG3-206ENST00000588423 SQORQ9Y6N5 450 aa18.06■□□□□ 0.48
RETREG3-206ENST00000588423 KDM3AQ9Y4C1 1321 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 KIF28PB7ZC32 967 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 EML1O00423 815 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 P4HBP07237 508 aaKnown RBP18.05■□□□□ 0.48
RETREG3-206ENST00000588423 DNAJB2P25686 324 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 EPHA7Q15375 998 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 RAB30Q15771 203 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 ZNF697Q5TEC3 545 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 DBF4BQ8NFT6 615 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 SEPT8Q92599 483 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 PBX4Q9BYU1 374 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 FAM49AQ9H0Q0 323 aaPredicted RBP18.05■□□□□ 0.48
RETREG3-206ENST00000588423 NOL7Q9UMY1 257 aaKnown RBP18.05■□□□□ 0.48
RETREG3-206ENST00000588423 PCDHA12Q9UN75 941 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 TRPV2Q9Y5S1 764 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 CDY2AQ9Y6F7 541 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 KAT6AQ92794 2004 aa18.05■□□□□ 0.48
RETREG3-206ENST00000588423 GRXCR1A8MXD5 290 aa18.04■□□□□ 0.48
RETREG3-206ENST00000588423 M0QZ92 97 aa18.04■□□□□ 0.48
RETREG3-206ENST00000588423 STBD1O95210 358 aa18.04■□□□□ 0.48
RETREG3-206ENST00000588423 MCM7P33993 719 aa18.04■□□□□ 0.48
RETREG3-206ENST00000588423 QARSP47897 775 aaKnown RBP18.04■□□□□ 0.48
RETREG3-206ENST00000588423 KCNJ6P48051 423 aa18.04■□□□□ 0.48
RETREG3-206ENST00000588423 WDR5P61964 334 aaKnown RBP18.04■□□□□ 0.48
RETREG3-206ENST00000588423 MKRN4PQ13434 485 aaPredicted RBP18.04■□□□□ 0.48
RETREG3-206ENST00000588423 TARBP2Q15633 366 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms