RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 PLA2G5P39877 138 aa15.62■□□□□ 0.09
HDAC5-208ENST00000588419 TMEM266Q2M3C6 531 aa15.62■□□□□ 0.09
HDAC5-208ENST00000588419 CEP55Q53EZ4 464 aa15.62■□□□□ 0.09
HDAC5-208ENST00000588419 BMP2KLQ5H9B9 411 aa15.62■□□□□ 0.09
HDAC5-208ENST00000588419 POTEBQ6S5H4 581 aa15.62■□□□□ 0.09
HDAC5-208ENST00000588419 DHX32Q7L7V1 743 aaKnown RBP15.62■□□□□ 0.09
HDAC5-208ENST00000588419 TNPO1Q92973 898 aaKnown RBP15.62■□□□□ 0.09
HDAC5-208ENST00000588419 ALG13Q9NP73 1137 aaKnown RBP15.62■□□□□ 0.09
HDAC5-208ENST00000588419 TCEAL9Q9UHQ7 104 aa15.62■□□□□ 0.09
HDAC5-208ENST00000588419 LRFN2Q9ULH4 789 aa15.62■□□□□ 0.09
HDAC5-208ENST00000588419 MRPL42Q9Y6G3 142 aaKnown RBP15.62■□□□□ 0.09
HDAC5-208ENST00000588419 GRXCR2A6NFK2 248 aa15.61■□□□□ 0.09
HDAC5-208ENST00000588419 FOSP01100 380 aaPredicted RBP15.61■□□□□ 0.09
HDAC5-208ENST00000588419 GATMP50440 423 aa15.61■□□□□ 0.09
HDAC5-208ENST00000588419 METAP2P50579 478 aaKnown RBP eCLIP15.61■□□□□ 0.09
HDAC5-208ENST00000588419 NFX1Q12986 1120 aaKnown RBP15.61■□□□□ 0.09
HDAC5-208ENST00000588419 AP3B2Q13367 1082 aa15.61■□□□□ 0.09
HDAC5-208ENST00000588419 FAM160B1Q5W0V3 765 aa15.61■□□□□ 0.09
HDAC5-208ENST00000588419 PLA2G4DQ86XP0 818 aa15.61■□□□□ 0.09
HDAC5-208ENST00000588419 CKAP2LQ8IYA6 745 aa15.61■□□□□ 0.09
HDAC5-208ENST00000588419 RASEFQ8IZ41 740 aa15.61■□□□□ 0.09
HDAC5-208ENST00000588419 NEK9Q8TD19 979 aa15.61■□□□□ 0.09
HDAC5-208ENST00000588419 RC3H2Q9HBD1 1191 aaKnown RBP15.61■□□□□ 0.09
HDAC5-208ENST00000588419 BARHL2Q9NY43 387 aa15.61■□□□□ 0.09
HDAC5-208ENST00000588419 PADI3Q9ULW8 664 aa15.61■□□□□ 0.09
HDAC5-208ENST00000588419 PCDHA2Q9Y5H9 948 aa15.61■□□□□ 0.09
HDAC5-208ENST00000588419 C5orf67F2Z3F1 127 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 hCG_1984214I3L0E3 225 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 CDC45O75419 566 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 DGKIO75912 1065 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 RPLP2P05387 115 aaKnown RBP15.6■□□□□ 0.09
HDAC5-208ENST00000588419 RB1P06400 928 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 SCG2P13521 617 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 GTF2F1P35269 517 aaKnown RBP eCLIP15.6■□□□□ 0.09
HDAC5-208ENST00000588419 SREBF1P36956 1147 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 KRT76Q01546 638 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 EXOSC10Q01780 885 aaKnown RBP15.6■□□□□ 0.09
HDAC5-208ENST00000588419 APOBRQ0VD83 1088 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 KRT32Q14532 448 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 PUS10Q3MIT2 529 aaKnown RBP15.6■□□□□ 0.09
HDAC5-208ENST00000588419 SPOUT1Q5T280 376 aaKnown RBP15.6■□□□□ 0.09
HDAC5-208ENST00000588419 MTHFD1LQ6UB35 978 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 PLPPR4Q7Z2D5 763 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 NPAS4Q8IUM7 802 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 CCDC60Q8IWA6 550 aaPredicted RBP15.6■□□□□ 0.09
HDAC5-208ENST00000588419 ZNF713Q8N859 430 aaPredicted RBP15.6■□□□□ 0.09
HDAC5-208ENST00000588419 FTHL17Q9BXU8 183 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 CELF4Q9BZC1 486 aaKnown RBP15.6■□□□□ 0.09
HDAC5-208ENST00000588419 LMAN2LQ9H0V9 348 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 C11orf16Q9NQ32 467 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 ZNF302Q9NR11 478 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 FAM50BQ9Y247 325 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 IGSF9BQ9UPX0 1349 aa15.6■□□□□ 0.09
HDAC5-208ENST00000588419 PI4K2BG5E9Z4 385 aa15.59■□□□□ 0.09
HDAC5-208ENST00000588419 PPFIA3O75145 1194 aa15.59■□□□□ 0.09
HDAC5-208ENST00000588419 CCNE2O96020 404 aa15.59■□□□□ 0.09
HDAC5-208ENST00000588419 MMP1P03956 469 aa15.59■□□□□ 0.09
HDAC5-208ENST00000588419 LINC00271P0C7V0 271 aa15.59■□□□□ 0.09
HDAC5-208ENST00000588419 STAG3L1P0CL83 205 aa15.59■□□□□ 0.09
HDAC5-208ENST00000588419 KLRC1P26715 233 aa15.59■□□□□ 0.09
HDAC5-208ENST00000588419 FUT2Q10981 343 aa15.59■□□□□ 0.09
HDAC5-208ENST00000588419 HYAL1Q12794 435 aa15.59■□□□□ 0.09
HDAC5-208ENST00000588419 PDXDC2PQ6P474 469 aa15.59■□□□□ 0.09
HDAC5-208ENST00000588419 CENPQQ7L2Z9 268 aaPredicted RBP15.59■□□□□ 0.09
HDAC5-208ENST00000588419 RTN4RL1Q86UN2 441 aaPredicted RBP15.59■□□□□ 0.09
HDAC5-208ENST00000588419 CMTR2Q8IYT2 770 aaKnown RBP15.59■□□□□ 0.09
HDAC5-208ENST00000588419 ZNF689Q96CS4 500 aaPredicted RBP15.59■□□□□ 0.09
HDAC5-208ENST00000588419 SMIM35A0A1B0GVV1 85 aa15.58■□□□□ 0.08
HDAC5-208ENST00000588419 FAM86B1E9PN63 330 aa15.58■□□□□ 0.08
HDAC5-208ENST00000588419 LINC01565O15544 149 aa15.58■□□□□ 0.08
HDAC5-208ENST00000588419 HBP1O60381 514 aa15.58■□□□□ 0.08
HDAC5-208ENST00000588419 FAM86B2P0C5J1 330 aa15.58■□□□□ 0.08
HDAC5-208ENST00000588419 ADD1P35611 737 aaKnown RBP15.58■□□□□ 0.08
HDAC5-208ENST00000588419 CLK2P49760 499 aaKnown RBP15.58■□□□□ 0.08
HDAC5-208ENST00000588419 NDUFV1P49821 464 aa15.58■□□□□ 0.08
HDAC5-208ENST00000588419 DLX2Q07687 328 aaPredicted RBP15.58■□□□□ 0.08
HDAC5-208ENST00000588419 CSPP1Q1MSJ5 1256 aa15.58■□□□□ 0.08
HDAC5-208ENST00000588419 SWSAP1Q6NVH7 229 aa15.58■□□□□ 0.08
HDAC5-208ENST00000588419 MIS18BP1Q6P0N0 1132 aa15.58■□□□□ 0.08
HDAC5-208ENST00000588419 Q6ZUG5 572 aa15.58■□□□□ 0.08
HDAC5-208ENST00000588419 CLP1Q92989 425 aaKnown RBP15.58■□□□□ 0.08
HDAC5-208ENST00000588419 JAKMIP1Q96N16 626 aaKnown RBP15.58■□□□□ 0.08
HDAC5-208ENST00000588419 ZNF577Q9BSK1 485 aa15.58■□□□□ 0.08
HDAC5-208ENST00000588419 GLT8D2Q9H1C3 349 aa15.58■□□□□ 0.08
HDAC5-208ENST00000588419 DENND3A2RUS2 1198 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 MEIS1O00470 390 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 GPR37L1O60883 481 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 TBX10O75333 385 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 RPS6KA5O75582 802 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 SLC26A2P50443 739 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 PFKFB3Q16875 520 aaPredicted RBP15.57■□□□□ 0.08
HDAC5-208ENST00000588419 REXO1Q8N1G1 1221 aaKnown RBP15.57■□□□□ 0.08
HDAC5-208ENST00000588419 METTL13Q8N6R0 699 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 KLHL23Q8NBE8 558 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 RASGRP4Q8TDF6 673 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 ATP8B4Q8TF62 1192 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 BRF1Q92994 677 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 PLVAPQ9BX97 442 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 TMX1Q9H3N1 280 aa15.57■□□□□ 0.08
HDAC5-208ENST00000588419 C6orf50Q9HD87 102 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms