RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 ARIH1Q9Y4X5 557 aaPredicted RBP14.33□□□□□ -0.12
SMARCD2-207ENST00000578234 PCDHA2Q9Y5H9 948 aa14.33□□□□□ -0.12
SMARCD2-207ENST00000578234 LOXHD1Q8IVV2 1947 aa14.33□□□□□ -0.12
SMARCD2-207ENST00000578234 SMIM35A0A1B0GVV1 85 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 SMCO2A6NFE2 343 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 M0QZ92 97 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 STXBP3O00186 592 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 CD52P31358 61 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 SREBF1P36956 1147 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 CLK2P49760 499 aaKnown RBP14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 ADCY7P51828 1080 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 RCAN1P53805 252 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 TMEM62Q0P6H9 643 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 AP3B2Q13367 1082 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 BTG3Q14201 252 aaPredicted RBP14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 PLCB4Q15147 1175 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 RTN1Q16799 776 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 FAM43BQ6ZT52 329 aaPredicted RBP14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 NIPA1Q7RTP0 329 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 RTN4RL1Q86UN2 441 aaPredicted RBP14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 CRIPAKQ8N1N5 446 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 NME8Q8N427 588 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 ZBTB10Q96DT7 871 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 PLVAPQ9BX97 442 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 ANO3Q9BYT9 981 aa14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 AGO4Q9HCK5 861 aaKnown RBP14.32□□□□□ -0.12
SMARCD2-207ENST00000578234 IGKV6D-21A0A0A0MT36 114 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 POTEB3A0JP26 581 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 GRM6O15303 877 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 ALADP13716 330 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 ITGB3BPQ13352 177 aaPredicted RBP14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 KRT32Q14532 448 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 ADCK5Q3MIX3 580 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 POTEBQ6S5H4 581 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 PGBD1Q96JS3 809 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 TCEANC2Q96MN5 208 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 CELF4Q9BZC1 486 aaKnown RBP14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 C11orf16Q9NQ32 467 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 FAM217BQ9NTX9 383 aaPredicted RBP14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 PADI3Q9ULW8 664 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 TRPV2Q9Y5S1 764 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 IGSF9BQ9UPX0 1349 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 KDM3AQ9Y4C1 1321 aa14.31□□□□□ -0.12
SMARCD2-207ENST00000578234 HMGB1P09429 215 aaKnown RBP14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 CDC27P30260 824 aa14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 CTC1Q2NKJ3 1217 aa14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 PAN2Q504Q3 1202 aaKnown RBP14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 NAALADL2Q58DX5 795 aa14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 SPOUT1Q5T280 376 aaKnown RBP14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 MTHFD1LQ6UB35 978 aa14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 ABHD15Q6UXT9 468 aa14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 NPAS4Q8IUM7 802 aa14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 CMTR2Q8IYT2 770 aaKnown RBP14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 TRAPPC12Q8WVT3 735 aa14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 LINC01599Q8WXQ3 324 aa14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 P2RX5Q93086 422 aa14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 ALG13Q9NP73 1137 aaKnown RBP14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 TMEM260Q9NX78 707 aa14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 PRKAG3Q9UGI9 489 aa14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 LRFN2Q9ULH4 789 aa14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 NAP1L2Q9ULW6 460 aaPredicted RBP14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 GINS2Q9Y248 185 aa14.3□□□□□ -0.12
SMARCD2-207ENST00000578234 KLF18A0A0U1RQI7 1052 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 CCDC196A0A1B0GTZ2 297 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 GOLGA8AA7E2F4 631 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 GOLGA8BA8MQT2 603 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 HBP1O60381 514 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 PPFIA3O75145 1194 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 REC8O95072 547 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 CCNE2O96020 404 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 MMP1P03956 469 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 STAG3L1P0CL83 205 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 KLRC1P26715 233 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 ZNF76P36508 570 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 LTBRP36941 435 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 KRT76Q01546 638 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 PAK2Q13177 524 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 FAM160B1Q5W0V3 765 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 MCTP2Q6DN12 878 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 CRYGNQ8WXF5 182 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 PLAGL2Q9UPG8 496 aa14.29□□□□□ -0.12
SMARCD2-207ENST00000578234 IGLV3-22A0A075B6J6 115 aa14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 FAM86B1E9PN63 330 aa14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 DHX15O43143 795 aaKnown RBP14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 CYP3A4P08684 503 aa14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 FAM86B2P0C5J1 330 aa14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 SCG2P13521 617 aa14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 ADD1P35611 737 aaKnown RBP14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 HYAL1Q12794 435 aa14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 PFKFB3Q16875 520 aaPredicted RBP14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 ATG2AQ2TAZ0 1938 aa14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 TRMT1LQ7Z2T5 733 aaKnown RBP14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 PLA2G4DQ86XP0 818 aa14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 MICAL1Q8TDZ2 1067 aa14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 ATP8B4Q8TF62 1192 aa14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 ZMYND12Q9H0C1 365 aa14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 MRPL42Q9Y6G3 142 aaKnown RBP14.28□□□□□ -0.12
SMARCD2-207ENST00000578234 COL1A2P08123 1366 aa14.27□□□□□ -0.12
SMARCD2-207ENST00000578234 ESYT2A0FGR8 921 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms