RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 C11orf84Q9BUA3 381 aaPredicted RBP12.2□□□□□ -0.46
PNN-203ENST00000554117 SLC26A6Q9BXS9 759 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 ZMYND12Q9H0C1 365 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 PCDHA2Q9Y5H9 948 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 CYP46A1Q9Y6A2 500 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 CHD7Q9P2D1 2997 aa12.2□□□□□ -0.46
PNN-203ENST00000554117 ADGRA3Q8IWK6 1321 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 SMIM35A0A1B0GVV1 85 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 MBLAC1A4D2B0 266 aaPredicted RBP12.19□□□□□ -0.46
PNN-203ENST00000554117 EPOPA6NHQ4 379 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 MEIS1O00470 390 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 NCK2O43639 380 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 CHRNA1P02708 482 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 ARP10275 920 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 TMOD1P28289 359 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 CDC27P30260 824 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 NLRP5P59047 1200 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 TFF2Q03403 129 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 SSRP1Q08945 709 aaKnown RBP12.19□□□□□ -0.46
PNN-203ENST00000554117 PLCB4Q15147 1175 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 ZNF484Q5JVG2 852 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 FBXO47Q5MNV8 452 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 ZNF746Q6NUN9 644 aaPredicted RBP12.19□□□□□ -0.46
PNN-203ENST00000554117 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
PNN-203ENST00000554117 FAM167AQ96KS9 214 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 C17orf80Q9BSJ5 609 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 C1QTNF1Q9BXJ1 281 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 LMAN2LQ9H0V9 348 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 TMEM260Q9NX78 707 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 SNX14Q9Y5W7 946 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 A0A0C4DFX4 3053 aa12.19□□□□□ -0.46
PNN-203ENST00000554117 NID2Q14112 1375 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 DENND3A2RUS2 1198 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 H3BNC9 293 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 CDKL5O76039 1030 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 CYP3A4P08684 503 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 CLK2P49760 499 aaKnown RBP12.18□□□□□ -0.46
PNN-203ENST00000554117 LPIN1Q14693 890 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 SPOUT1Q5T280 376 aaKnown RBP12.18□□□□□ -0.46
PNN-203ENST00000554117 KRT40Q6A162 431 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 RUFY4Q6ZNE9 571 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 RUFY3Q7L099 469 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 ZNF710Q8N1W2 664 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 FBXL16Q8N461 479 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 BANK1Q8NDB2 785 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 ATP8B4Q8TF62 1192 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 BBXQ8WY36 941 aaPredicted RBP12.18□□□□□ -0.46
PNN-203ENST00000554117 MAP7D2Q96T17 732 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 CELF4Q9BZC1 486 aaKnown RBP12.18□□□□□ -0.46
PNN-203ENST00000554117 NSUN3Q9H649 340 aaKnown RBP12.18□□□□□ -0.46
PNN-203ENST00000554117 SH3GLB2Q9NR46 395 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 AAASQ9NRG9 546 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 GINS2Q9Y248 185 aa12.18□□□□□ -0.46
PNN-203ENST00000554117 CUL9Q8IWT3 2517 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.17□□□□□ -0.46
PNN-203ENST00000554117 GPR182O15218 404 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 MAGEB2O15479 319 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 LPXNO60711 386 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 RPS6KA5O75582 802 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 ATG7O95352 703 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 KLRC1P26715 233 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 KCNQ1P51787 676 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 CCT2P78371 535 aaKnown RBP12.17□□□□□ -0.46
PNN-203ENST00000554117 MGAT3Q09327 533 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 TMEM62Q0P6H9 643 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 NFX1Q12986 1120 aaKnown RBP12.17□□□□□ -0.46
PNN-203ENST00000554117 TCTN1Q2MV58 587 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 PRR16Q569H4 304 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 TYW1BQ6NUM6 668 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 SWSAP1Q6NVH7 229 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 MTHFD1LQ6UB35 978 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 NPAS4Q8IUM7 802 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 METTL13Q8N6R0 699 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 CYP2W1Q8TAV3 490 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 PHKBQ93100 1093 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 SCLT1Q96NL6 688 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 PLVAPQ9BX97 442 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 UBE2ZQ9H832 354 aaPredicted RBP12.17□□□□□ -0.46
PNN-203ENST00000554117 NRBP2Q9NSY0 501 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 PCDHB7Q9Y5E2 793 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 PCDHA10Q9Y5I2 948 aa12.17□□□□□ -0.46
PNN-203ENST00000554117 IGSF9BQ9UPX0 1349 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 KDM3AQ9Y4C1 1321 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 MYH11P35749 1972 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 WDR64B1ANS9 1081 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 ENPP3O14638 875 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 GAS7O60861 476 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 ARHGEF15O94989 841 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 DEXIO95424 95 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 BMP1P13497 986 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 CPA1P15085 419 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 IFNAR1P17181 557 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 IBSPP21815 317 aaPredicted RBP12.16□□□□□ -0.46
PNN-203ENST00000554117 CD52P31358 61 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 SFNP31947 248 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 USP11P51784 963 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 FUT2Q10981 343 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 ITGB3BPQ13352 177 aaPredicted RBP12.16□□□□□ -0.46
PNN-203ENST00000554117 NAALADL2Q58DX5 795 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 ABHD15Q6UXT9 468 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms