RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 TRBV23OR9-2A0A075B6M9 112 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 ZNF561-AS1K7EIQ3 104 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 IGF2BP3O00425 579 aaKnown RBP eCLIP7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 FGF10O15520 208 aaPredicted RBP7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 PPFIA4O75335 1185 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 H2AFYO75367 372 aaKnown RBP7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 IFIT2P09913 472 aaKnown RBP7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 NBPF7P0C2Y1 421 aaPredicted RBP7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 PHKG2P15735 406 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 VCAM1P19320 739 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 PAX3P23760 479 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 TPP2P29144 1249 aaPredicted RBP7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 NOS3P29474 1203 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 SCAND1P57086 179 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 SMAD3P84022 425 aaKnown RBP7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 SMAD2Q15796 467 aaKnown RBP7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 CRY1Q16526 586 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 ARHGAP29Q52LW3 1261 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 PRRT3Q5FWE3 981 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 C11orf96Q7Z7L8 435 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 SPICE1Q8N0Z3 855 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 ARMC10Q8N2F6 343 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 LINC00116Q8NCU8 138 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 GIMAP7Q8NHV1 300 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 BOCQ9BWV1 1114 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 SMURF1Q9HCE7 757 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 DDX20Q9UHI6 824 aaKnown RBP7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 ZNF652Q9Y2D9 606 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 MRFAP1Q9Y605 127 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 ABCA3Q99758 1704 aa7.74□□□□□ -1.17
TGFBR1-208ENST00000550253 ANO9A1A5B4 782 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 DVL2O14641 736 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 ZRANB2O95218 330 aaKnown RBP eCLIP7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 PDE6AP16499 860 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 LSAMPQ13449 338 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 PICALMQ13492 652 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 B3GNT9Q6UX72 402 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 RUNDC1Q96C34 613 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 LRGUKQ96M69 825 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 UBA5Q9GZZ9 404 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 DDX21Q9NR30 783 aaKnown RBP eCLIP7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 BSDC1Q9NW68 430 aaPredicted RBP7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 GTF2IRD1Q9UHL9 959 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 TRPC5Q9UL62 973 aaPredicted RBP7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 PLCH1Q4KWH8 1693 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 FMN2Q9NZ56 1722 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 KLHL33A6NCF5 533 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 H7C1D1 291 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 APAF1O14727 1248 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 IL33O95760 270 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 SLC9A1P19634 815 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 HTR3AP46098 478 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 NFKBIBQ15653 356 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 COBLL1Q53SF7 1204 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 GPR158Q5T848 1215 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 ZNF385CQ66K41 422 aaPredicted RBP7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 OSTM1Q86WC4 334 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 CPNE8Q86YQ8 564 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 FAM20CQ8IXL6 584 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 MFSD4AQ8N468 514 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 WFDC12Q8WWY7 111 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 E2F7Q96AV8 911 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 PTCHD1Q96NR3 888 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 SLC12A5Q9H2X9 1139 aa7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 TIMM13Q9Y5L4 95 aaPredicted RBP7.73□□□□□ -1.17
TGFBR1-208ENST00000550253 SLIT2O94813 1529 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 FRMPD2Q68DX3 1309 aaPredicted RBP7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 USP32Q8NFA0 1604 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 NAIPQ13075 1403 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 RALGAPBQ86X10 1494 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 KNDC1Q76NI1 1749 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 GOLGA8AA7E2F4 631 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 GOLGA8BA8MQT2 603 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 XPOTO43592 962 aaKnown RBP7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 KRT37O76014 449 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 AMY2AP04746 511 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 SYPP08247 313 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 AMY2BP19961 511 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 LSP1P33241 339 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 JAM2P57087 298 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 SAFBQ15424 915 aaKnown RBP eCLIP7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 ZNF610Q8N9Z0 462 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 GATA6Q92908 595 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 STRBPQ96SI9 672 aaKnown RBP7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 ELF4Q99607 663 aaPredicted RBP7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 KCNJ15Q99712 375 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 MS4A5Q9H3V2 200 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 MAN1C1Q9NR34 630 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 AP5S1Q9NUS5 200 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 INTUQ9ULD6 942 aa7.72□□□□□ -1.17
TGFBR1-208ENST00000550253 HFM1A2PYH4 1435 aa7.71□□□□□ -1.17
TGFBR1-208ENST00000550253 SLC12A8A0AV02 714 aa7.71□□□□□ -1.18
TGFBR1-208ENST00000550253 C7orf72A4D263 438 aa7.71□□□□□ -1.18
TGFBR1-208ENST00000550253 MYO1BO43795 1136 aa7.71□□□□□ -1.18
TGFBR1-208ENST00000550253 BCL6P41182 706 aa7.71□□□□□ -1.18
TGFBR1-208ENST00000550253 IREB2P48200 963 aaKnown RBP7.71□□□□□ -1.18
TGFBR1-208ENST00000550253 PCBP3P57721 371 aaKnown RBP7.71□□□□□ -1.18
TGFBR1-208ENST00000550253 PDCD1Q15116 288 aa7.71□□□□□ -1.18
TGFBR1-208ENST00000550253 ZRSR2Q15696 482 aaKnown RBP7.71□□□□□ -1.18
TGFBR1-208ENST00000550253 RRP12Q5JTH9 1297 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms