RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 LPIN1Q14693 890 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 PTPROQ16827 1216 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 PRR16Q569H4 304 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 ZNF484Q5JVG2 852 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 FBXO47Q5MNV8 452 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 ODR4Q5SWX8 454 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 ZNF746Q6NUN9 644 aaPredicted RBP10.62□□□□□ -0.71
YBX3-218ENST00000546298 SWSAP1Q6NVH7 229 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 PDXDC2PQ6P474 469 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 TSHZ1Q6ZSZ6 1077 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 CKAP2LQ8IYA6 745 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 SMAP1Q8IYB5 467 aaPredicted RBP10.62□□□□□ -0.71
YBX3-218ENST00000546298 HLA-CQ95604 372 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 IL17RAQ96F46 866 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 FTHL17Q9BXU8 183 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 NCOA5Q9HCD5 579 aaKnown RBP10.62□□□□□ -0.71
YBX3-218ENST00000546298 PDRG1Q9NUG6 133 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 VPS54Q9P1Q0 977 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 MTUS1Q9ULD2 1270 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 PCDHA10Q9Y5I2 948 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 ENPP3O14638 875 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 CDKL5O76039 1030 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 STAG3L1P0CL83 205 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 KLRC1P26715 233 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 KRT40Q6A162 431 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 GALNT17Q6IS24 598 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 MTHFD1LQ6UB35 978 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 FIBCD1Q8N539 461 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 ADAMTS19Q8TE59 1207 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 GDPD5Q8WTR4 605 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 BBXQ8WY36 941 aaPredicted RBP10.61□□□□□ -0.71
YBX3-218ENST00000546298 FAM167AQ96KS9 214 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 RIT2Q99578 217 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 CELF4Q9BZC1 486 aaKnown RBP10.61□□□□□ -0.71
YBX3-218ENST00000546298 OSBPL7Q9BZF2 842 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 CEP131Q9UPN4 1083 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 RWDD3Q9Y3V2 267 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 SAMM50Q9Y512 469 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 COL1A2P08123 1366 aa10.61□□□□□ -0.71
YBX3-218ENST00000546298 MYO9BQ13459 2157 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 KDM3AQ9Y4C1 1321 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 SZT2Q5T011 3432 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 WDR64B1ANS9 1081 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 TNFRSF10AO00220 468 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 PPFIA3O75145 1194 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 RB1P06400 928 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 CD52P31358 61 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 GPM6BQ13491 265 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 EPC2Q52LR7 807 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 SPRED2Q7Z698 418 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 CCDC60Q8IWA6 550 aaPredicted RBP10.6□□□□□ -0.71
YBX3-218ENST00000546298 TMEM192Q8IY95 271 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 ZNF710Q8N1W2 664 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 RASGRP4Q8TDF6 673 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 TRAPPC12Q8WVT3 735 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 C17orf80Q9BSJ5 609 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 UPF3BQ9BZI7 483 aaKnown RBP10.6□□□□□ -0.71
YBX3-218ENST00000546298 NRBP2Q9NSY0 501 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 PCDHA4Q9UN74 947 aa10.6□□□□□ -0.71
YBX3-218ENST00000546298 MAFBQ9Y5Q3 323 aaPredicted RBP10.6□□□□□ -0.71
YBX3-218ENST00000546298 IGSF9BQ9UPX0 1349 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 H3BNC9 293 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 MAGEB2O15479 319 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 GAS7O60861 476 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 XBP1P17861 261 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 SFNP31947 248 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 JAK3P52333 1124 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 ANAPC15P60006 121 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 TMEM62Q0P6H9 643 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 PAK2Q13177 524 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 ANKRD1Q15327 319 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 TIGD5Q53EQ6 642 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 NPAS4Q8IUM7 802 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 BLIDQ8IZY5 108 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 DAGLBQ8NCG7 672 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 TET1Q8NFU7 2136 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 TBCKQ8TEA7 893 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 ZBTB10Q96DT7 871 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 MRPL38Q96DV4 380 aaKnown RBP10.59□□□□□ -0.71
YBX3-218ENST00000546298 UHRF1Q96T88 793 aaPredicted RBP10.59□□□□□ -0.71
YBX3-218ENST00000546298 TEKT3Q9BXF9 490 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 SLKQ9H2G2 1235 aaPredicted RBP10.59□□□□□ -0.71
YBX3-218ENST00000546298 AGO3Q9H9G7 860 aaKnown RBP10.59□□□□□ -0.71
YBX3-218ENST00000546298 DISC1Q9NRI5 854 aa10.59□□□□□ -0.71
YBX3-218ENST00000546298 SCN5AQ14524 2016 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 ADAMTS3O15072 1205 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 GPR182O15218 404 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 MSH4O15457 936 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 BMP1P13497 986 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 TMOD1P28289 359 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 BMPR1AP36894 532 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 NFX1Q12986 1120 aaKnown RBP10.58□□□□□ -0.72
YBX3-218ENST00000546298 STK3Q13188 491 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 BTG3Q14201 252 aaPredicted RBP10.58□□□□□ -0.72
YBX3-218ENST00000546298 NONOQ15233 471 aaKnown RBP eCLIP10.58□□□□□ -0.72
YBX3-218ENST00000546298 Q4G0T1 1027 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 MOXD1Q6UVY6 613 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 KRT25Q7Z3Z0 450 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 KIAA0319LQ8IZA0 1049 aa10.58□□□□□ -0.72
YBX3-218ENST00000546298 METTL13Q8N6R0 699 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms