RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 ATP4AP20648 1035 aa16.93■□□□□ 0.3
DFFA-203ENST00000476658 PPP2R5CQ13362 524 aa16.93■□□□□ 0.3
DFFA-203ENST00000476658 LRIT3Q3SXY7 679 aa16.93■□□□□ 0.3
DFFA-203ENST00000476658 MARCH8Q5T0T0 291 aa16.93■□□□□ 0.3
DFFA-203ENST00000476658 LARP1BQ659C4 914 aaKnown RBP16.93■□□□□ 0.3
DFFA-203ENST00000476658 TAF2Q6P1X5 1199 aa16.93■□□□□ 0.3
DFFA-203ENST00000476658 B3GNT9Q6UX72 402 aa16.93■□□□□ 0.3
DFFA-203ENST00000476658 RUFY4Q6ZNE9 571 aa16.93■□□□□ 0.3
DFFA-203ENST00000476658 BBXQ8WY36 941 aaPredicted RBP16.93■□□□□ 0.3
DFFA-203ENST00000476658 ZBTB10Q96DT7 871 aa16.93■□□□□ 0.3
DFFA-203ENST00000476658 FAM167AQ96KS9 214 aa16.93■□□□□ 0.3
DFFA-203ENST00000476658 VAV3Q9UKW4 847 aa16.93■□□□□ 0.3
DFFA-203ENST00000476658 LOXHD1Q8IVV2 1947 aa16.93■□□□□ 0.3
DFFA-203ENST00000476658 MBLAC1A4D2B0 266 aaPredicted RBP16.92■□□□□ 0.3
DFFA-203ENST00000476658 RSPH10B2B2RC85 870 aa16.92■□□□□ 0.3
DFFA-203ENST00000476658 CAND2O75155 1236 aa16.92■□□□□ 0.3
DFFA-203ENST00000476658 PARNO95453 639 aaKnown RBP16.92■□□□□ 0.3
DFFA-203ENST00000476658 PFKMP08237 780 aa16.92■□□□□ 0.3
DFFA-203ENST00000476658 RSPH10BP0C881 870 aa16.92■□□□□ 0.3
DFFA-203ENST00000476658 U2AF2P26368 475 aaKnown RBP eCLIP16.92■□□□□ 0.3
DFFA-203ENST00000476658 FXR1P51114 621 aaKnown RBP eCLIP16.92■□□□□ 0.3
DFFA-203ENST00000476658 PRKCEQ02156 737 aa16.92■□□□□ 0.3
DFFA-203ENST00000476658 ZNF174Q15697 407 aa16.92■□□□□ 0.3
DFFA-203ENST00000476658 UGCGQ16739 394 aa16.92■□□□□ 0.3
DFFA-203ENST00000476658 ZNF484Q5JVG2 852 aa16.92■□□□□ 0.3
DFFA-203ENST00000476658 TTC38Q5R3I4 469 aa16.92■□□□□ 0.3
DFFA-203ENST00000476658 NCAPH2Q6IBW4 605 aa16.92■□□□□ 0.3
DFFA-203ENST00000476658 OTOP2Q7RTS6 562 aa16.92■□□□□ 0.3
DFFA-203ENST00000476658 RSPH3Q86UC2 560 aa16.92■□□□□ 0.3
DFFA-203ENST00000476658 FAM49AQ9H0Q0 323 aaPredicted RBP16.92■□□□□ 0.3
DFFA-203ENST00000476658 MTIF3Q9H2K0 278 aaKnown RBP16.92■□□□□ 0.3
DFFA-203ENST00000476658 PCDHA12Q9UN75 941 aa16.92■□□□□ 0.3
DFFA-203ENST00000476658 COL1A2P08123 1366 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 EML1O00423 815 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 SOX1O00570 391 aaPredicted RBP16.91■□□□□ 0.3
DFFA-203ENST00000476658 ZNF862O60290 1169 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 OATP04181 439 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 ACTN1P12814 892 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 TXKP42681 527 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 TRAPPC10P48553 1259 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 TRAF7Q6Q0C0 670 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 MTHFD1LQ6UB35 978 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 HSCBQ8IWL3 235 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 BANK1Q8NDB2 785 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 DNAJB3Q8WWF6 145 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 VWCEQ96DN2 955 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 NRBP2Q9NSY0 501 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 CEP131Q9UPN4 1083 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 SIP14410 1827 aa16.91■□□□□ 0.3
DFFA-203ENST00000476658 ZBBXA8MT70 800 aa16.9■□□□□ 0.3
DFFA-203ENST00000476658 NBNO60934 754 aa16.9■□□□□ 0.3
DFFA-203ENST00000476658 KLRC1P26715 233 aa16.9■□□□□ 0.3
DFFA-203ENST00000476658 ORC2Q13416 577 aaPredicted RBP16.9■□□□□ 0.3
DFFA-203ENST00000476658 NBR1Q14596 966 aa16.9■□□□□ 0.3
DFFA-203ENST00000476658 HERVK_113Q902F9 699 aa16.9■□□□□ 0.3
DFFA-203ENST00000476658 SNX21Q969T3 373 aa16.9■□□□□ 0.3
DFFA-203ENST00000476658 TMEM60Q9H2L4 133 aa16.9■□□□□ 0.3
DFFA-203ENST00000476658 TTC12Q9H892 705 aaPredicted RBP16.9■□□□□ 0.3
DFFA-203ENST00000476658 SEPT9Q9UHD8 586 aaPredicted RBP16.9■□□□□ 0.3
DFFA-203ENST00000476658 PCDHA2Q9Y5H9 948 aa16.9■□□□□ 0.3
DFFA-203ENST00000476658 LAMA3Q16787 3333 aa16.9■□□□□ 0.3
DFFA-203ENST00000476658 GBF1Q92538 1859 aa16.89■□□□□ 0.29
DFFA-203ENST00000476658 ZBTB42B2RXF5 422 aa16.89■□□□□ 0.29
DFFA-203ENST00000476658 RPLP2P05387 115 aaKnown RBP16.89■□□□□ 0.29
DFFA-203ENST00000476658 PDCP20941 246 aa16.89■□□□□ 0.29
DFFA-203ENST00000476658 PSMC5P62195 406 aa16.89■□□□□ 0.29
DFFA-203ENST00000476658 SPIRE1Q08AE8 756 aa16.89■□□□□ 0.29
DFFA-203ENST00000476658 MBTPS1Q14703 1052 aa16.89■□□□□ 0.29
DFFA-203ENST00000476658 GPNMBQ14956 572 aa16.89■□□□□ 0.29
DFFA-203ENST00000476658 EPHA7Q15375 998 aa16.89■□□□□ 0.29
DFFA-203ENST00000476658 RPAINQ86UA6 219 aa16.89■□□□□ 0.29
DFFA-203ENST00000476658 INTS4Q96HW7 963 aaKnown RBP16.89■□□□□ 0.29
DFFA-203ENST00000476658 LRCH3Q96II8 777 aa16.89■□□□□ 0.29
DFFA-203ENST00000476658 MTMR9Q96QG7 549 aa16.89■□□□□ 0.29
DFFA-203ENST00000476658 CXXC1Q9P0U4 656 aaPredicted RBP16.89■□□□□ 0.29
DFFA-203ENST00000476658 LAMA2P24043 3122 aaKnown RBP16.88■□□□□ 0.29
DFFA-203ENST00000476658 MICAL3Q7RTP6 2002 aa16.88■□□□□ 0.29
DFFA-203ENST00000476658 SMIM35A0A1B0GVV1 85 aa16.88■□□□□ 0.29
DFFA-203ENST00000476658 VPS37CA5D8V6 355 aaPredicted RBP16.88■□□□□ 0.29
DFFA-203ENST00000476658 DDX11L8A8MPP1 907 aa16.88■□□□□ 0.29
DFFA-203ENST00000476658 DKC1O60832 514 aaKnown RBP eCLIP16.88■□□□□ 0.29
DFFA-203ENST00000476658 CXCL10P02778 98 aa16.88■□□□□ 0.29
DFFA-203ENST00000476658 P4HBP07237 508 aaKnown RBP16.88■□□□□ 0.29
DFFA-203ENST00000476658 OR52Z1P0C646 297 aa16.88■□□□□ 0.29
DFFA-203ENST00000476658 QARSP47897 775 aaKnown RBP16.88■□□□□ 0.29
DFFA-203ENST00000476658 TOB1P50616 345 aaPredicted RBP16.88■□□□□ 0.29
DFFA-203ENST00000476658 TMEM62Q0P6H9 643 aa16.88■□□□□ 0.29
DFFA-203ENST00000476658 XKR3Q5GH77 459 aa16.88■□□□□ 0.29
DFFA-203ENST00000476658 METTL13Q8N6R0 699 aa16.88■□□□□ 0.29
DFFA-203ENST00000476658 RBAK-RBAKDNI3L0D1 243 aa16.87■□□□□ 0.29
DFFA-203ENST00000476658 M0QZ92 97 aa16.87■□□□□ 0.29
DFFA-203ENST00000476658 C22orf31O95567 290 aa16.87■□□□□ 0.29
DFFA-203ENST00000476658 CHRNA1P02708 482 aa16.87■□□□□ 0.29
DFFA-203ENST00000476658 HSP90AA1P07900 732 aaKnown RBP16.87■□□□□ 0.29
DFFA-203ENST00000476658 MRPS6P82932 125 aaKnown RBP16.87■□□□□ 0.29
DFFA-203ENST00000476658 CYP4A11Q02928 519 aa16.87■□□□□ 0.29
DFFA-203ENST00000476658 MTERF2Q49AM1 385 aa16.87■□□□□ 0.29
DFFA-203ENST00000476658 RILPL1Q5EBL4 403 aa16.87■□□□□ 0.29
DFFA-203ENST00000476658 FAM26DQ5JW98 314 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms