RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-213	ENST00000471667	KSR1	Q8IVT5	923 aa		4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	GPRC5A	Q8NFJ5	357 aa		4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	GPBAR1	Q8TDU6	330 aa		4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	EDC3	Q96F86	508 aa	Known RBP	4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	FAM89A	Q96GI7	184 aa		4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	HEXIM2	Q96MH2	286 aa	Known RBP	4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	ANKRD2	Q9GZV1	360 aa		4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	TNKS2	Q9H2K2	1166 aa		4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	CERS4	Q9HA82	394 aa		4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	IL23A	Q9NPF7	189 aa		4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	DLL3	Q9NYJ7	618 aa		4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	CTNNA3	Q9UI47	895 aa		4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	AKAP2	Q9Y2D5	859 aa		4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	XIRP2	A4UGR9	3374 aa		4.65	□□□□□ -1.67
LRCH3-213	ENST00000471667	FAM186A	A6NE01	2351 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	COL4A6	Q14031	1691 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	SETX	Q7Z333	2677 aa	Known RBP	4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	ACR	P10323	421 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	ACTN1	P12814	892 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	CSF2RA	P15509	400 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	NME2	P22392	152 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	IGHMBP2	P38935	993 aa	Known RBP	4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	RABGGTB	P53611	331 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	CCNA1	P78396	465 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	ZNF252P-AS1	Q0IIN9	211 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	AIMP1	Q12904	312 aa	Known RBP	4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	GRB10	Q13322	594 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	MOGS	Q13724	837 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	PTPRO	Q16827	1216 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	FAM214B	Q7L5A3	538 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	OTOP2	Q7RTS6	562 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	PLEKHH3	Q7Z736	793 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	SCYL3	Q8IZE3	742 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	EMILIN2	Q9BXX0	1053 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	CD209	Q9NNX6	404 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	PRDM7	Q9NQW5	492 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	STARD7	Q9NQZ5	370 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	TTF2	Q9UNY4	1162 aa	Known RBP	4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	PCDHAC2	Q9Y5I4	1007 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	SNX11	Q9Y5W9	270 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	IVNS1ABP	Q9Y6Y0	642 aa		4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	RIF1	Q5UIP0	2472 aa	Known RBP	4.64	□□□□□ -1.67
LRCH3-213	ENST00000471667	FLNB	O75369	2602 aa	Known RBP	4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	TRIM75P	A6NK02	468 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	NCK2	O43639	380 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	ADRB1	P08588	477 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	VCP	P55072	806 aa	Known RBP	4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	ZXDA	P98168	799 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	IKZF1	Q13422	519 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	LRRC41	Q15345	812 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	TAF7	Q15545	349 aa	Predicted RBP	4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	PPM1J	Q5JR12	505 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	WDR78	Q5VTH9	848 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	FKBP1C	Q5VVH2	108 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	KRT40	Q6A162	431 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	ZC3H14	Q6PJT7	736 aa	Known RBP	4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	NXPE4	Q6UWF7	544 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	ANKRD33	Q7Z3H0	272 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	ASB11	Q8WXH4	323 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	SECISBP2L	Q93073	1101 aa	Known RBP	4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	SLC9A7	Q96T83	725 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	SLC38A3	Q99624	504 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	HAUS7	Q99871	368 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	CBX8	Q9HC52	389 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	CACNA2D2	Q9NY47	1150 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	SLC5A4	Q9NY91	659 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	GTF2IRD1	Q9UHL9	959 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	LRRFIP2	Q9Y608	721 aa	Known RBP	4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	MYO9B	Q13459	2157 aa		4.63	□□□□□ -1.67
LRCH3-213	ENST00000471667	MAST4	O15021	2626 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	PLXNA1	Q9UIW2	1896 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	WDFY4	Q6ZS81	3184 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	LRRC10B	A6NIK2	292 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	PRR5-ARHGAP8	B1AHC4	643 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667		H3BQ06	376 aa	Predicted RBP	4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	STXBP3	O00186	592 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	U2SURP	O15042	1029 aa	Known RBP	4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	SEPT4	O43236	478 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	PDE8A	O60658	829 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	PFKM	P08237	780 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	RARB	P10826	455 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	NTF4	P34130	210 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	CRK	P46108	304 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	ARHGAP8	P85298	464 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	MESP2	Q0VG99	397 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	CCL14	Q16627	93 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	TIGD5	Q53EQ6	642 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	MFSD14B	Q5SR56	506 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	LCE4A	Q5TA78	99 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	SPOCD1	Q6ZMY3	1216 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	PRR23B	Q6ZRT6	265 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	TMC7	Q7Z402	723 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	GPR142	Q7Z601	462 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	UBE3D	Q7Z6J8	389 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	ZSWIM9	Q86XI8	627 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	LURAP1L	Q8IV03	231 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	ZFPM1	Q8IX07	1006 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	SPACA3	Q8IXA5	215 aa		4.62	□□□□□ -1.67
LRCH3-213	ENST00000471667	CERS5	Q8N5B7	392 aa		4.62	□□□□□ -1.67

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