RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 OSGEPQ9NPF4 335 aa15.74■□□□□ 0.11
ERCC3-202ENST00000426778 ADAMTSL1Q8N6G6 1762 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 PCNTO95613 3336 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 NOVP48745 357 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 PLS1Q14651 629 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 ALS2CLQ60I27 953 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 CHADLQ6NUI6 762 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 KIAA0825Q8IV33 1275 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 NAGPAQ9UK23 515 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 NR2E1Q9Y466 385 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 KIF4AO95239 1232 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 GYS1P13807 737 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 NR1D1P20393 614 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 ARHGAP4P98171 946 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 METTL13Q8N6R0 699 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 RDH13Q8NBN7 331 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 CEP63Q96MT8 703 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 DBNDD1Q9H9R9 158 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 SEPT11Q9NVA2 429 aaKnown RBP15.73■□□□□ 0.11
ERCC3-202ENST00000426778 GCNT4Q9P109 453 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 ATF5Q9Y2D1 282 aaPredicted RBP15.73■□□□□ 0.11
ERCC3-202ENST00000426778 BTAF1O14981 1849 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 COL24A1Q17RW2 1714 aa15.73■□□□□ 0.11
ERCC3-202ENST00000426778 MEIS2O14770 477 aa15.72■□□□□ 0.11
ERCC3-202ENST00000426778 XRCC5P13010 732 aaKnown RBP15.72■□□□□ 0.11
ERCC3-202ENST00000426778 TMOD1P28289 359 aa15.72■□□□□ 0.11
ERCC3-202ENST00000426778 NMT1P30419 496 aaKnown RBP15.72■□□□□ 0.11
ERCC3-202ENST00000426778 LSP1P33241 339 aa15.72■□□□□ 0.11
ERCC3-202ENST00000426778 CTTNQ14247 550 aaKnown RBP15.72■□□□□ 0.11
ERCC3-202ENST00000426778 SEPT2Q15019 361 aa15.72■□□□□ 0.11
ERCC3-202ENST00000426778 RBM17Q96I25 401 aaKnown RBP15.72■□□□□ 0.11
ERCC3-202ENST00000426778 LUC7LQ9NQ29 371 aaKnown RBP15.72■□□□□ 0.11
ERCC3-202ENST00000426778 AIPL1Q9NZN9 384 aa15.72■□□□□ 0.11
ERCC3-202ENST00000426778 DCDC2CA8MYV0 355 aa15.72■□□□□ 0.11
ERCC3-202ENST00000426778 DAPK3O43293 454 aa15.72■□□□□ 0.11
ERCC3-202ENST00000426778 ERLIN2O94905 339 aa15.72■□□□□ 0.11
ERCC3-202ENST00000426778 AFPP02771 609 aaKnown RBP15.72■□□□□ 0.11
ERCC3-202ENST00000426778 SPATA31C1P0DKV0 1188 aa15.72■□□□□ 0.11
ERCC3-202ENST00000426778 ORC2Q13416 577 aaPredicted RBP15.72■□□□□ 0.11
ERCC3-202ENST00000426778 MKRN4PQ13434 485 aaPredicted RBP15.72■□□□□ 0.11
ERCC3-202ENST00000426778 DAAM2Q86T65 1068 aa15.72■□□□□ 0.11
ERCC3-202ENST00000426778 SLF2Q8IX21 1173 aa15.72■□□□□ 0.11
ERCC3-202ENST00000426778 UBLCP1Q8WVY7 318 aaPredicted RBP15.72■□□□□ 0.11
ERCC3-202ENST00000426778 KCNMB3Q9NPA1 279 aa15.72■□□□□ 0.11
ERCC3-202ENST00000426778 NOC2LQ9Y3T9 749 aaKnown RBP15.72■□□□□ 0.11
ERCC3-202ENST00000426778 KDM3AQ9Y4C1 1321 aa15.72■□□□□ 0.11
ERCC3-202ENST00000426778 DDTLA6NHG4 134 aaPredicted RBP15.71■□□□□ 0.11
ERCC3-202ENST00000426778 hCG_1984214I3L0E3 225 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 SART1O43290 800 aaKnown RBP15.71■□□□□ 0.11
ERCC3-202ENST00000426778 HDLBPQ00341 1268 aaKnown RBP15.71■□□□□ 0.11
ERCC3-202ENST00000426778 DDR1Q08345 913 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 LLGL1Q15334 1064 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 KNOP1Q1ED39 458 aaKnown RBP15.71■□□□□ 0.11
ERCC3-202ENST00000426778 TBC1D10BQ4KMP7 808 aaPredicted RBP15.71■□□□□ 0.11
ERCC3-202ENST00000426778 EFCAB13Q8IY85 973 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 ZNF713Q8N859 430 aaPredicted RBP15.71■□□□□ 0.11
ERCC3-202ENST00000426778 FAM163AQ96GL9 167 aaPredicted RBP15.71■□□□□ 0.11
ERCC3-202ENST00000426778 MYO1FO00160 1098 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 EML1O00423 815 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 KRIT1O00522 736 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 TTI1O43156 1089 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 LRRN2O75325 713 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 HSD17B3P37058 310 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 UAP1Q16222 522 aaPredicted RBP15.71■□□□□ 0.11
ERCC3-202ENST00000426778 SLFN13Q68D06 897 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 DPY19L2P1Q6NXN4 242 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 MAEAQ7L5Y9 396 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 PEX26Q7Z412 305 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 GLYCTKQ8IVS8 523 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 TRIM51Q9BSJ1 452 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 EDEM3Q9BZQ6 932 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 TSKSQ9UJT2 592 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 DNM3Q9UQ16 869 aa15.71■□□□□ 0.11
ERCC3-202ENST00000426778 E7EVH7 732 aa15.71■□□□□ 0.1
ERCC3-202ENST00000426778 G3V3G9 751 aa15.71■□□□□ 0.1
ERCC3-202ENST00000426778 ECHS1P30084 290 aa15.71■□□□□ 0.1
ERCC3-202ENST00000426778 TNNC1P63316 161 aa15.71■□□□□ 0.1
ERCC3-202ENST00000426778 SPIRE1Q08AE8 756 aa15.71■□□□□ 0.1
ERCC3-202ENST00000426778 ZNF211Q13398 564 aaPredicted RBP15.71■□□□□ 0.1
ERCC3-202ENST00000426778 DCAF8Q5TAQ9 597 aa15.71■□□□□ 0.1
ERCC3-202ENST00000426778 TBC1D22AQ8WUA7 517 aa15.71■□□□□ 0.1
ERCC3-202ENST00000426778 NR3C1P04150 777 aa15.7■□□□□ 0.1
ERCC3-202ENST00000426778 TRIM49P0CI25 452 aa15.7■□□□□ 0.1
ERCC3-202ENST00000426778 TRIM49CP0CI26 452 aa15.7■□□□□ 0.1
ERCC3-202ENST00000426778 RNF187Q5TA31 235 aaPredicted RBP15.7■□□□□ 0.1
ERCC3-202ENST00000426778 AADACL2Q6P093 401 aa15.7■□□□□ 0.1
ERCC3-202ENST00000426778 SYN2Q92777 582 aaPredicted RBP15.7■□□□□ 0.1
ERCC3-202ENST00000426778 ZC3H12CQ9C0D7 883 aaKnown RBP15.7■□□□□ 0.1
ERCC3-202ENST00000426778 A0A087WUV0 522 aaPredicted RBP15.7■□□□□ 0.1
ERCC3-202ENST00000426778 DDX3XO00571 662 aaKnown RBP eCLIP15.7■□□□□ 0.14e-6■■■□□ 15.1
ERCC3-202ENST00000426778 GNA14O95837 355 aa15.7■□□□□ 0.1
ERCC3-202ENST00000426778 EPB41P11171 864 aaKnown RBP15.7■□□□□ 0.1
ERCC3-202ENST00000426778 INPP5BP32019 993 aa15.7■□□□□ 0.1
ERCC3-202ENST00000426778 ARHGAP44Q17R89 818 aa15.7■□□□□ 0.1
ERCC3-202ENST00000426778 CRY2Q49AN0 593 aa15.7■□□□□ 0.1
ERCC3-202ENST00000426778 GLE1Q53GS7 698 aaKnown RBP15.7■□□□□ 0.1
ERCC3-202ENST00000426778 GPATCH4Q5T3I0 446 aaKnown RBP15.7■□□□□ 0.1
ERCC3-202ENST00000426778 PALB2Q86YC2 1186 aa15.7■□□□□ 0.1
ERCC3-202ENST00000426778 TPCN2Q8NHX9 752 aa15.7■□□□□ 0.1
ERCC3-202ENST00000426778 NUCKS1Q9H1E3 243 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms