RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 SCLYQ96I15 445 aa17.35■□□□□ 0.37
TNFRSF12A-202ENST00000341627 FAM167AQ96KS9 214 aa17.35■□□□□ 0.37
TNFRSF12A-202ENST00000341627 IGSF9BQ9UPX0 1349 aa17.35■□□□□ 0.37
TNFRSF12A-202ENST00000341627 TREHO43280 583 aa17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 DKC1O60832 514 aaKnown RBP eCLIP17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 OR52Z1P0C646 297 aa17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 SYT1P21579 422 aa17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 TXKP42681 527 aa17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 HIC1Q14526 733 aa17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 TAF2Q6P1X5 1199 aa17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 PSRC1Q6PGN9 363 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 BRAPQ7Z569 592 aa17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 MTMR9Q96QG7 549 aa17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 TTC12Q9H892 705 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 MTMR10Q9NXD2 777 aa17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 TUBE1Q9UJT0 475 aa17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 CEP131Q9UPN4 1083 aa17.34■□□□□ 0.37
TNFRSF12A-202ENST00000341627 KAT6AQ92794 2004 aa17.33■□□□□ 0.37
TNFRSF12A-202ENST00000341627 COL1A2P08123 1366 aa17.33■□□□□ 0.36
TNFRSF12A-202ENST00000341627 TOB1P50616 345 aaPredicted RBP17.33■□□□□ 0.36
TNFRSF12A-202ENST00000341627 IGBP1P78318 339 aa17.33■□□□□ 0.36
TNFRSF12A-202ENST00000341627 ADAM17P78536 824 aa17.33■□□□□ 0.36
TNFRSF12A-202ENST00000341627 RBL2Q08999 1139 aa17.33■□□□□ 0.36
TNFRSF12A-202ENST00000341627 ZNF484Q5JVG2 852 aa17.33■□□□□ 0.36
TNFRSF12A-202ENST00000341627 NCAPH2Q6IBW4 605 aa17.33■□□□□ 0.36
TNFRSF12A-202ENST00000341627 HERVK_113Q902F9 699 aa17.33■□□□□ 0.36
TNFRSF12A-202ENST00000341627 DHX38Q92620 1227 aaKnown RBP17.33■□□□□ 0.36
TNFRSF12A-202ENST00000341627 TMEM60Q9H2L4 133 aa17.33■□□□□ 0.36
TNFRSF12A-202ENST00000341627 NRBP2Q9NSY0 501 aa17.33■□□□□ 0.36
TNFRSF12A-202ENST00000341627 CXXC1Q9P0U4 656 aaPredicted RBP17.33■□□□□ 0.36
TNFRSF12A-202ENST00000341627 COL6A3P12111 3177 aa17.33■□□□□ 0.36
TNFRSF12A-202ENST00000341627 MYH9P35579 1960 aaKnown RBP17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 MBLAC1A4D2B0 266 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 EML1O00423 815 aa17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 CAND2O75155 1236 aa17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 PARNO95453 639 aaKnown RBP17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 FGBP02675 491 aa17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 OATP04181 439 aa17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 RPLP2P05387 115 aaKnown RBP17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 IQCF3P0C7M6 154 aa17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 PDIA4P13667 645 aaKnown RBP17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 SELPP16109 830 aa17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 ATP4AP20648 1035 aa17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 PSMC5P62195 406 aa17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 PRKCEQ02156 737 aa17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 SPIRE1Q08AE8 756 aa17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 EPHA7Q15375 998 aa17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 PCDHB6Q9Y5E3 794 aa17.32■□□□□ 0.36
TNFRSF12A-202ENST00000341627 CDH23Q9H251 3354 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 LAD1O00515 517 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 P4HBP07237 508 aaKnown RBP17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 CKBP12277 381 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 RFC2P35250 354 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 THPOP40225 353 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 QARSP47897 775 aaKnown RBP17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 BECN1Q14457 450 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 NBR1Q14596 966 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 GPNMBQ14956 572 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 UGCGQ16739 394 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 TMEM266Q2M3C6 531 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 TRIM71Q2Q1W2 868 aaKnown RBP17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 LRRC8DQ7L1W4 858 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 OTOP2Q7RTS6 562 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 TRMT1LQ7Z2T5 733 aaKnown RBP17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 RSPH3Q86UC2 560 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 RPUSD2Q8IZ73 545 aaKnown RBP17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 BANK1Q8NDB2 785 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 NEK9Q8TD19 979 aa17.31■□□□□ 0.36
TNFRSF12A-202ENST00000341627 TRIP12Q14669 1992 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 GRXCR1A8MXD5 290 aa17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 STX6O43752 255 aa17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 ZNF862O60290 1169 aa17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 PFKMP08237 780 aa17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 PTGDRQ13258 359 aa17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 XKR3Q5GH77 459 aa17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 MARCH8Q5T0T0 291 aa17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 FERMT3Q86UX7 667 aa17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 TRAPPC12Q8WVT3 735 aa17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 WNT8BQ93098 351 aa17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 GUCD1Q96NT3 240 aa17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 TTYH1Q9H313 450 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 SEMA6BQ9H3T3 888 aa17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 PCDHA2Q9Y5H9 948 aa17.3■□□□□ 0.36
TNFRSF12A-202ENST00000341627 KLRC1P26715 233 aa17.29■□□□□ 0.36
TNFRSF12A-202ENST00000341627 TECP42680 631 aa17.29■□□□□ 0.36
TNFRSF12A-202ENST00000341627 ZNF618Q5T7W0 954 aa17.29■□□□□ 0.36
TNFRSF12A-202ENST00000341627 TRAF7Q6Q0C0 670 aa17.29■□□□□ 0.36
TNFRSF12A-202ENST00000341627 MTHFD1LQ6UB35 978 aa17.29■□□□□ 0.36
TNFRSF12A-202ENST00000341627 DEFB128Q7Z7B8 93 aa17.29■□□□□ 0.36
TNFRSF12A-202ENST00000341627 RPAINQ86UA6 219 aa17.29■□□□□ 0.36
TNFRSF12A-202ENST00000341627 C4orf32Q8N8J7 132 aa17.29■□□□□ 0.36
TNFRSF12A-202ENST00000341627 ERMNQ8TAM6 284 aa17.29■□□□□ 0.36
TNFRSF12A-202ENST00000341627 FAM161BQ96MY7 647 aa17.29■□□□□ 0.36
TNFRSF12A-202ENST00000341627 RAB34Q9BZG1 259 aa17.29■□□□□ 0.36
TNFRSF12A-202ENST00000341627 ZSWIM4Q9H7M6 989 aa17.29■□□□□ 0.36
TNFRSF12A-202ENST00000341627 SEPT9Q9UHD8 586 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF12A-202ENST00000341627 MTMR6Q9Y217 621 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms