RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 SYF2O95926 243 aaKnown RBP27.52■■■□□ 2
ROM1-201ENST00000278833 CACNB3P54284 484 aa27.52■■■□□ 2
ROM1-201ENST00000278833 C9orf131Q5VYM1 1079 aa27.52■■■□□ 2
ROM1-201ENST00000278833 NFRKBQ6P4R8 1299 aa27.52■■■□□ 2
ROM1-201ENST00000278833 SFR1Q86XK3 245 aa27.52■■■□□ 2
ROM1-201ENST00000278833 CCDC102AQ96A19 550 aa27.52■■■□□ 2
ROM1-201ENST00000278833 KCNQ5Q9NR82 932 aa27.52■■■□□ 2
ROM1-201ENST00000278833 PCDHAC2Q9Y5I4 1007 aa27.52■■■□□ 2
ROM1-201ENST00000278833 GTPBP10A4D1E9 387 aaKnown RBP27.51■■□□□ 1.99
ROM1-201ENST00000278833 AFPP02771 609 aaKnown RBP27.51■■□□□ 1.99
ROM1-201ENST00000278833 HOXD13P35453 343 aa27.51■■□□□ 1.99
ROM1-201ENST00000278833 PRKCIP41743 596 aa27.51■■□□□ 1.99
ROM1-201ENST00000278833 CASP5P51878 434 aa27.51■■□□□ 1.99
ROM1-201ENST00000278833 AOC3Q16853 763 aa27.51■■□□□ 1.99
ROM1-201ENST00000278833 TUFT1Q9NNX1 390 aa27.51■■□□□ 1.99
ROM1-201ENST00000278833 RNF181Q9P0P0 153 aa27.51■■□□□ 1.99
ROM1-201ENST00000278833 ARMCX3Q9UH62 379 aaPredicted RBP27.51■■□□□ 1.99
ROM1-201ENST00000278833 UBE4BO95155 1302 aa27.51■■□□□ 1.99
ROM1-201ENST00000278833 EIF3DO15371 548 aaKnown RBP eCLIP27.51■■□□□ 1.99
ROM1-201ENST00000278833 EPS15P42566 896 aa27.51■■□□□ 1.99
ROM1-201ENST00000278833 HNRNPH2P55795 449 aaKnown RBP27.51■■□□□ 1.99
ROM1-201ENST00000278833 RBM26Q5T8P6 1007 aaKnown RBP27.51■■□□□ 1.99
ROM1-201ENST00000278833 RNF216Q9NWF9 866 aaPredicted RBP27.51■■□□□ 1.99
ROM1-201ENST00000278833 HERC5Q9UII4 1024 aaKnown RBP27.51■■□□□ 1.99
ROM1-201ENST00000278833 IGLV3-22A0A075B6J6 115 aa27.5■■□□□ 1.99
ROM1-201ENST00000278833 PPIP5K2O43314 1243 aa27.5■■□□□ 1.99
ROM1-201ENST00000278833 RPL13P26373 211 aaKnown RBP27.5■■□□□ 1.99
ROM1-201ENST00000278833 ACTN2P35609 894 aa27.5■■□□□ 1.99
ROM1-201ENST00000278833 CACNB1Q02641 598 aaPredicted RBP27.5■■□□□ 1.99
ROM1-201ENST00000278833 NNTQ13423 1086 aa27.5■■□□□ 1.99
ROM1-201ENST00000278833 NENFQ9UMX5 172 aa27.5■■□□□ 1.99
ROM1-201ENST00000278833 MYBL2P10244 700 aa27.49■■□□□ 1.99
ROM1-201ENST00000278833 TNNT3P45378 269 aaPredicted RBP27.49■■□□□ 1.99
ROM1-201ENST00000278833 PSMC6P62333 389 aa27.49■■□□□ 1.99
ROM1-201ENST00000278833 KLHL30Q0D2K2 578 aa27.49■■□□□ 1.99
ROM1-201ENST00000278833 CFAP221Q4G0U5 840 aa27.49■■□□□ 1.99
ROM1-201ENST00000278833 CCDC181Q5TID7 509 aa27.49■■□□□ 1.99
ROM1-201ENST00000278833 EMBQ6PCB8 327 aa27.49■■□□□ 1.99
ROM1-201ENST00000278833 LMAN1P49257 510 aa27.49■■□□□ 1.99
ROM1-201ENST00000278833 PABPC4Q13310 644 aaKnown RBP eCLIP27.49■■□□□ 1.99
ROM1-201ENST00000278833 RAPGEF1Q13905 1077 aa27.49■■□□□ 1.99
ROM1-201ENST00000278833 LARGE2Q8N3Y3 721 aa27.49■■□□□ 1.99
ROM1-201ENST00000278833 TBC1D5Q92609 795 aa27.49■■□□□ 1.99
ROM1-201ENST00000278833 CAVIN3Q969G5 261 aa27.49■■□□□ 1.99
ROM1-201ENST00000278833 ASTN1O14525 1302 aa27.48■■□□□ 1.99
ROM1-201ENST00000278833 GDF11O95390 407 aa27.48■■□□□ 1.99
ROM1-201ENST00000278833 EPHB4P54760 987 aa27.48■■□□□ 1.99
ROM1-201ENST00000278833 GYS2P54840 703 aa27.48■■□□□ 1.99
ROM1-201ENST00000278833 MEI1Q5TIA1 1274 aa27.48■■□□□ 1.99
ROM1-201ENST00000278833 CRACR2AQ9BSW2 395 aa27.48■■□□□ 1.99
ROM1-201ENST00000278833 VPS33BQ9H267 617 aa27.48■■□□□ 1.99
ROM1-201ENST00000278833 STIM2Q9P246 746 aa27.48■■□□□ 1.99
ROM1-201ENST00000278833 PRR12Q9ULL5 1215 aa27.48■■□□□ 1.99
ROM1-201ENST00000278833 RNF40O75150 1001 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 RBM5P52756 815 aaKnown RBP eCLIP27.47■■□□□ 1.99
ROM1-201ENST00000278833 PPP2R5CQ13362 524 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 EPHA7Q15375 998 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 IRF2BP2Q7Z5L9 587 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 EIF2AK1Q9BQI3 630 aaKnown RBP27.47■■□□□ 1.99
ROM1-201ENST00000278833 LRRC1Q9BTT6 524 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 RABGAP1Q9Y3P9 1069 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 DAAM1Q9Y4D1 1078 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 COL4A5P29400 1685 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 A0A087X0T9 212 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 TBCAO75347 108 aaKnown RBP27.47■■□□□ 1.99
ROM1-201ENST00000278833 GH2P01242 217 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 FAM228BP0C875 321 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 XRCC5P13010 732 aaKnown RBP27.47■■□□□ 1.99
ROM1-201ENST00000278833 ZSCAN26Q16670 478 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 DRC1Q96MC2 740 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 HSD17B14Q9BPX1 270 aa27.47■■□□□ 1.99
ROM1-201ENST00000278833 RAD21O60216 631 aa27.46■■□□□ 1.99
ROM1-201ENST00000278833 PLA2G6O60733 806 aa27.46■■□□□ 1.99
ROM1-201ENST00000278833 NR3C1P04150 777 aa27.46■■□□□ 1.99
ROM1-201ENST00000278833 MYBP10242 640 aa27.46■■□□□ 1.99
ROM1-201ENST00000278833 UCHL3P15374 230 aa27.46■■□□□ 1.99
ROM1-201ENST00000278833 ERCC3P19447 782 aa27.46■■□□□ 1.99
ROM1-201ENST00000278833 KLRC1P26715 233 aa27.46■■□□□ 1.99
ROM1-201ENST00000278833 MKNK1Q9BUB5 465 aa27.46■■□□□ 1.99
ROM1-201ENST00000278833 SEL1LQ9UBV2 794 aa27.46■■□□□ 1.99
ROM1-201ENST00000278833 GFPT2O94808 682 aa27.45■■□□□ 1.99
ROM1-201ENST00000278833 EPB41P11171 864 aaKnown RBP27.45■■□□□ 1.99
ROM1-201ENST00000278833 JAG1P78504 1218 aa27.45■■□□□ 1.99
ROM1-201ENST00000278833 EXOC3L4Q17RC7 722 aa27.45■■□□□ 1.99
ROM1-201ENST00000278833 USH1GQ495M9 461 aa27.45■■□□□ 1.99
ROM1-201ENST00000278833 FAM133AQ8N9E0 248 aa27.45■■□□□ 1.99
ROM1-201ENST00000278833 SLC5A5Q92911 643 aa27.45■■□□□ 1.99
ROM1-201ENST00000278833 INPP4AQ96PE3 977 aaPredicted RBP27.45■■□□□ 1.99
ROM1-201ENST00000278833 KCND2Q9NZV8 630 aa27.45■■□□□ 1.99
ROM1-201ENST00000278833 CWC15Q9P013 229 aaKnown RBP27.45■■□□□ 1.99
ROM1-201ENST00000278833 DMGDHQ9UI17 866 aaKnown RBP27.45■■□□□ 1.99
ROM1-201ENST00000278833 DICER1Q9UPY3 1922 aaKnown RBP27.45■■□□□ 1.99
ROM1-201ENST00000278833 AGPSO00116 658 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 NCK2O43639 380 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 PALMO75781 387 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 IVLP07476 585 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 PON1P27169 355 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 JAM2P57087 298 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 IFI16Q16666 785 aaKnown RBP27.44■■□□□ 1.98
ROM1-201ENST00000278833 BORCS6Q96GS4 357 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms